Aphelocoma coerulescens (scrub jay): 138101062
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Entry
138101062 CDS
T10543
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138101062 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138101062 (PHF1)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138101062 (PHF1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
138101062 (PHF1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
138101062 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
PHD_ash2p_like
PHD_2
PHDvar_NSD
ASH2L-like_WH
DUF4537
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
138101062
NCBI-ProteinID:
XP_068855003
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MAAAPGGSPPQSPPKPPQIGEGQDVLARWTDGLLYLGVVKKVDPSRRGCLIQFEDNSQFF
VLWKDISPAAVPGEEPSCCVCGGNGGNGGNGGNGGNGGNSGNSGNAGNGRNPGNAGNGGN
GRNGGNGQNGGNSGNSGNAGNGGNRQNGGNSLVRCGKCGHAYHQRCHVPPPPGGPGPWSC
RRCVFAVATKRGGALRRGPQARAMLRMKSVLPYALGALDWDPPHLHNLQHCYCYCGGPGH
WNLKMLQCSQCSQWFHEACTQCLSKPLLYGDRFYVFECSVCRGGAESVRRLPLRWVDVAH
LLLYHLSVCCKKKYFDLEREILPFANSNWEALLLGQLSATPKSERYGRLLGALSTHKDRF
VSGREMKKRKGLFGLHTRAPPPLPPNLLRGPPGTPRPEPDSPPIRMFASFHPSANTSPSS
PTPDPEPSPPPARRRPPPRPPRAPLPPPRPRPPPLPPPLPPASSRAA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccccgggggggtcgcccccccagagccccccgaagcccccccagatcggg
gagggccaggacgtgctggcgcgctggacggacgggctgctctacctgggcgtcgtcaag
aaggtggacccctcccgccggggctgtttgatccaattcgaggacaattcccagttcttc
gtgctctggaaggacatcagccccgcggccgtgccgggggaggagccctcgtgctgcgtc
tgcggcgggaacggcgggaacggcgggaacggcgggaacggcgggaacggagggaattcc
gggaattccgggaatgccgggaacggccggaatcctgggaatgccgggaatggcgggaac
ggccggaacggcgggaacggccagaacggcgggaattccgggaattccgggaatgccggg
aacggcgggaatcgccagaacggcgggaattcgctggttcggtgcgggaaatgcgggcac
gcgtaccaccagcgctgccacgtgccccctccccccggcgggcccggcccctggagctgc
cgccgctgcgtcttcgccgtggccaccaagcggggcggggccctgcgccggggcccgcag
gctcgggccatgctgcgcatgaagtcggtgctgccgtacgccctgggggccctggactgg
gaccccccgcacctgcacaacctccagcactgctactgctactgcggcgggcccgggcac
tggaacctgaagatgctccagtgctcccagtgctcccagtggttccacgaggcctgcacc
cagtgcctcagcaagcccctgctctacggggaccggttttatgtctttgagtgcagcgtc
tgccggggcggggccgagagcgtgaggagactccccctgcgctgggtggacgtggctcac
ctgctcctctaccacctcagcgtctgctgcaagaagaaatatttcgacctggagcgggaa
attctccccttcgccaactccaactgggaggcgctgctgctgggccagctctcggccacg
cccaagtcggagcgctacgggcgcctgctcggggccctgagcacccacaaggacaggttc
gtctcgggccgggagatgaagaagcgcaaggggctcttcgggctccacacccgcgcccct
cccccactgccccccaacctcctgcggggcccccccgggaccccccggcccgagcccgac
agcccccccatccggatgttcgcctccttccacccctcggccaacaccagccccagctcg
cccacgccggacccggagccgtcccctccccccgcgcgccgccggccccccccccgcccc
ccccgcgcgcccctcccccccccgcggccccgccccccgcccctccccccgcccctcccc
cccgcgtcctcgcgcgccgcgtga
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