Aphelocoma coerulescens (scrub jay): 138106418
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Entry
138106418 CDS
T10543
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04145
Phagosome
acoe04814
Motor proteins
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138106418
09142 Cell motility
04814 Motor proteins
138106418
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138106418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138106418
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138106418
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
138106418
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
138106418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_WDR5
Dynein_IC2
Beta-prop_EML
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Tricorn_2nd
CFAP43_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
138106418
NCBI-ProteinID:
XP_068863092
LinkDB
All DBs
Position
2:33431771..33623911
Genome browser
AA seq
628 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADLQQKKEPAQEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSSKSVSTPSDAGSQDSGDLGPIGRTLQWDTDPSVLQLQS
DSELGRRLHKLGVSKITQVDFLPREVVSYSKETQTPLATHQSEEDEDDEEMVEPKAQDDL
ETENQDQKQEVKEAPPRELTEEEKQQVLHSEEFLIFFDRTIRVIERALAEDSDIFFDYSG
RDVEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKS
KPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEIFEGHQGPVTGINCHMAVG
PIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRL
DLWNLNNDTEVPTASVTIEGASALNRVRWAQAGKEVAVGDSEGRIWVYDVGELAVPHNDE
WTRFARTLVEIRANRADSEEEGAVELAA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgatttaaaagcagaacttgagcgcaaaaaacaacgtttggctcag
ataagagaagagaagaaacggaaggaggaagaaaggaagaaaaaagaggctgatctacag
cagaagaaggagccagctcaggaagattctgacctagaccgtaaaagaagagagacagaa
gctttgttacagagcattggtatatccccagaaccacctctagtcccaacccctatgtct
ccctcttcgaaatcagtgagcacacccagtgacgcaggcagccaggattcaggggatctg
ggacccataggaaggaccttgcaatgggacacagacccctcagtgctgcaactccagtct
gactctgaacttggacgcagactgcacaaactaggggtgtcaaagattacccaggttgat
ttcttacctcgagaggtggtatcatactccaaggagacgcagacacctcttgccacgcat
caatctgaagaggatgaagatgatgaagagatggtggagccaaaagcacaggatgactta
gagacagaaaatcaggaccagaagcaggaagtgaaagaagctcctcctagagaactgaca
gaggaagaaaagcaacaagttctccattcagaagaattcctgatattttttgaccgcaca
atacgtgtaattgagcgagctttggctgaagattcagacatcttctttgactacagtggc
agagatgtagaagagaaagatggagatgttcaagcaggagccaacctttcctttaaccgg
cagttttatgatgagcactggtcaaagcatcgtgtcgtcacctgcatggattggtctctt
cagtaccctgaattgatggttgcatcttataacaataatgaagatgctccacatgaaccg
gatggggtagccttggtatggaacatgaagttcaagaaaaccacaccagagtatgtgttc
cattgtcagtcctccgtgatgtcggtctgttttgcccgctttcacccaaacctggtcgtt
ggtggaacatactctggccaaattgtcctgtgggataatcgcagtcacaggcgcactccg
gttcagagaactcccttatctgctgctgctcacacgcatcctgtgtattgtgtgaatgta
gttggaacacagaatgcacacaatcttattactgtctctacggatggcaaaatgtgctcc
tggagcctggacatgctctcaactccacaggagagcatggagctggtatacaataagtcc
aaaccagtggcagtcacaggaatggctttcccaacgggagatgtcaataactttgtcgtt
ggcagtgaagagggaacagtctacacagcctgtcgtcatggaagtaaagctggcattggt
gaaatttttgaaggccaccaaggacctgtcacaggaatcaattgtcacatggcagtgggt
ccaatagacttttcccatctctttgtcacatcatcatttgactggacagtgaaattgtgg
accacaaagcacaacaagccgctctactcctttgaagacaatgccgactatgtctacgat
gtcatgtggtcgccagtgcatcccgcgctcttcgcctgcgtggacgggatggggcgcctg
gatctgtggaacctgaataacgacaccgaggttcccacagccagtgtcaccatagaagga
gcgtctgccctcaaccgtgtccgctgggcccaggctgggaaggaggtagcagttggtgat
tcagaaggccgcatatgggtctatgatgttggagagctggctgttccacacaacgatgag
tggacgcgcttcgcccggaccttggtggagatccgcgccaaccgcgccgacagtgaagaa
gagggggcggtggagctcgcagcctag
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