Aphelocoma coerulescens (scrub jay): 138106479
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Entry
138106479 CDS
T10543
Symbol
TRA2A
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138106479 (TRA2A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138106479 (TRA2A)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138106479 (TRA2A)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138106479 (TRA2A)
Spliceosome [BR:
acoe03041
]
Common components
Common spliceosomal components
SR proteins
138106479 (TRA2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
138106479
NCBI-ProteinID:
XP_068863217
LinkDB
All DBs
Position
2:complement(41177615..41203097)
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AA seq
275 aa
AA seq
DB search
MSDVEENNFEGRESRSQSKSPAGSPARVKSESRSGSRSPSRASKHSESHSRSRSKSRSRS
RRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTC
LGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHA
NGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGAGRRRDSYYDRGYDRGYD
RYEEYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtggaggagaacaacttcgaggggagggagtctcgctcccagtcaaaatct
ccagctgggagtcctgctcgtgtaaaatcagagagcaggtcaggatctcgcagtccatcg
agggcttccaaacattctgaatcgcactctaggtcaagatcaaaatcaagatccaggtcc
agaagacattcgcacagacgttacactcgttccagatcccattctcattcccataggaga
cgttctcgaagcagatcgtacacaccagagtaccgtcgtcgaaggagccgtagtcattct
ccaatgtccaacaggagaaggcacactggcagcagagctaatccggatcctaatacctgt
cttggagtatttggtctcagtttgtacactactgagagagatttgcgtgaagtcttctcc
cgttatggacctttgactggtgtcaatgtggtttatgatcaacggactggacgatcaaga
ggatttgctttcgtttattttgagagaattgatgattctaaggaggcgatggagcatgca
aatggaatggagctggatggcaggaggattcgagtggattactcaatcaccaagagagca
catacacctaccccaggcatctacatgggcaggccaacacacagtggaggaggtggtggc
ggtggagcgggtcgtcgccgggactcatattatgatagggggtatgacagaggatatgac
agatatgaagaatatgattacagatacaggagacgatcaccatcgccttactatagtcga
taccgatcgcgatcgagatcccgttcctatagtccaaggcgctactga
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