Aphelocoma coerulescens (scrub jay): 138107500
Help
Entry
138107500 CDS
T10543
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138107500 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138107500 (CRNKL1)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138107500 (CRNKL1)
Spliceosome [BR:
acoe03041
]
Complex B
Other components
Prp19-related factors
138107500 (CRNKL1)
Complex C
138107500 (CRNKL1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
138107500 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
138107500
NCBI-ProteinID:
XP_068864856
LinkDB
All DBs
Position
3:complement(1872699..1883055)
Genome browser
AA seq
686 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDVEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWMEWQPE
EQAWHSYINFELRYKEVDRARSIYERFVLVHPDVKNWIKYARFEEKHSYFAHARKVYERA
VEFFGEDHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQNAQNLFKNYTIFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDAETVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDAERTRQVYQACLELLPHKKFTFAKMWLLYAQF
EIRQKNLPLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTS
WIKFAELETILGDIDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRL
LQRTQHVKVWISFAQFELSAGREERLPRCRQIYEEANKAMRSCEEKEERVMLLESWRSFE
DEFGTDATKERIDKLMPEKIKKRRKLQAEDGSDAGWEEYYDYIFPEDTANQPNLKLLAMA
KLWKKQQQESEAAAMDPDKDIDESQT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacggcggccggcaagcagcgcatccccaaagtggcgaaggtgaagaacaag
gcacccgccgaagttcagatcacagcagagcagcttctgagagaggcaaaggagagggaa
ctcgagcttctcccaccgcctccgcagcagaagatcacagatgttgaggagctaaatgac
tataaactccggaagaggaagacttttgaagataacataagaaagaacaggactgttatc
agcaactggataaagtacgcacaatgggaagaaagcctgaaggaaatccagagagcccgt
tccatctacgagcgtgccttggatgtggactacaggaacgtcaccctctggctgaaatat
gccgagatggaaatgaagaaccgccaggtcaaccatgcccgcaacatttgggaccgggcc
attaccaccctgcccagggtgaaccagttctggtacaagtatacttacatggaggagatg
ctgggcaatgttgctgggtcacgccaggtgtttgaacggtggatggagtggcagccagag
gagcaagcctggcattcctacatcaacttcgagctgagatacaaggaggtggacagagca
cggagcatttacgagaggttcgtcctcgttcaccccgacgtgaagaactggatcaagtac
gcgcgcttcgaggagaagcacagctactttgcccacgccaggaaggtgtacgagagggcc
gtggagttctttggggaagaccacatggatgagcacttgtacgtggctttcgccaagttt
gaggagaaccagaaagagtttgaaagagtgagggttatctacaagtatgccttggataga
attccaaagcagaatgcccagaatctcttcaagaattacaccatctttgagaagaagttt
ggagacaggaggggaatcgaggacatcattgtcagcaagaggagattccagtatgaggag
gaggtgaaggcaaacccccacaactacgacgcgtggttcgactacctgaggctggtggag
agcgacacggacgccgagaccgtgcgggaggtgtacgagagagccatcgccaacgtgccc
cccatccaggagaagcgccactggaagaggtacatctacctctggattaactatgcgctc
tatgaggagctggaggcaaaggatgcagagcgaaccagacaggtgtaccaggcatgcctt
gagctcctgccccacaagaagtttacatttgccaaaatgtggctgctgtatgcacagttc
gaaattcgacagaaaaacctcccccttgccagaagggctttggggacatccataggtaaa
tgtccaaaaaacaaactgtttaaaggttacattgagctggagttacaactgcgcgaattt
gaccgctgccgaaagctgtatgaaaaattcctggagtttgcaccggaaaattgcacatcc
tggattaagtttgctgagctggagaccatccttggggacatcgaccgcgcccgggccatc
tacgagctggctatcggccagccccggctggacatgccagaggtcctttggaaatcctac
attgactttgagattgagcaagaggagtatgagaaaaccaggaacctctaccggcggctg
ctgcagcgcacacagcacgtcaaggtgtggatcagcttcgcgcagttcgagctgtcggcg
gggagggaggagcggctgccgcgctgccggcagatctacgaggaggccaacaaggccatg
cgcagctgcgaggagaaggaggagagggtcatgctgctggagtcctggaggagcttcgag
gatgagtttgggaccgatgccactaaggagaggatagataagctgatgcctgagaagata
aagaagaggagaaagctgcaggccgaagatgggtctgatgctggatgggaggagtactat
gattacattttcccggaagacactgccaatcagcccaacctcaaactcctggctatggca
aagctctggaagaagcagcagcaggagagcgaagctgcagccatggatcctgacaaggac
attgatgaaagccagacttaa
DBGET
integrated database retrieval system
