Aphelocoma coerulescens (scrub jay): 138110276
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Entry
138110276 CDS
T10543
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138110276 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138110276 (RBMX)
Spliceosome [BR:
acoe03041
]
Common components
Common spliceosomal components
hnRNP proteins
138110276 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_5
RRM_occluded
PHM7_cyt
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
138110276
NCBI-ProteinID:
XP_068871087
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All DBs
Position
4A:complement(241047..251418)
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AA seq
385 aa
AA seq
DB search
MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGAR
GPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGG
PPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSR
DEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYG
GSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSS
SSRGAPRGGGRGGSRSDRGGGRSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagatcgtcctgggaagctattcattgggggcctgaacacagagactaat
gagaaagcccttgaggctgtatttggcaaatatggacgcattgtggaagtccttttgatg
aaagatcgggaaacgaacaagtccaggggatttgcattcgtcacgtttgagagtccagca
gatgcaaaagatgctgccagagatatgaatggaaagtcattagatgggaaggcaattaaa
gtggaacaagcaaccaagccatcctttgaaagtggtggtaggcgtgggccgccaccccct
ccccgaagcagaggtcctcccaggggccttagaggtgcaagaggcggaagtggcgcaaga
ggaccaccttcaagagggagtcacttggggtcttctcgagggccacttcctatgaagaga
ggtccacctccacgaagtggaggccctccacctaaaagatcggcaccttcaggaccagtg
cgtagcagtagtatgggaggaagagctcctgtatcacgtggaagagatggttacggtggt
cctccacgcagagaaccaatgccgtcacggagagatgtctacatgtctccaagagatgat
ggctatagcactaaagatggttattcaagcagagattatcccagttccagggatacccgg
gactacgcaccacctccccgagactacgcatatcgtgattatggtcattccagttcacgt
gatgagtacccctccaggggatatagtctttcctcctatagtgatcgtgatggatatggt
ggtggacgtgacagagactactctgatcatccaagtggaggctcctacagagattcatat
gagagttatggtaactcacgtagtgctccacctgctcgagggcccccgccatcatatggt
ggaagcagtcgctatgatgattacggcagcacacgagatggatatggaagccgagaaagt
tactcaagcagcagaagtgatgtctactcaagtggccgtgatcgtgttggaagacaggac
aggggtcttcccccatccatggaaaggggctatccacctcctcgggattcttacagtagt
tcaagccgtggggcacccagaggtggtggccgtggtggaagcagatccgatagaggtgga
ggcagaagcagatactaa
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