Aphelocoma coerulescens (scrub jay): 138110530
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Entry
138110530 CDS
T10543
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138110530 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acoe01001
]
138110530 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138110530 (TAF1)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138110530 (TAF1)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
138110530 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138110530 (TAF1)
Protein kinases [BR:
acoe01001
]
Serine/threonine kinases: Other
TAF1 family
138110530 (TAF1)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138110530 (TAF1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
138110530 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
138110530
NCBI-ProteinID:
XP_068871655
LinkDB
All DBs
Position
4A:17798639..17828068
Genome browser
AA seq
1957 aa
AA seq
DB search
MSDSESEEEADGARAEPFSLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGVLGLGNLI
TEITASEEESAESEGAHLDEEGWVKSTEDAVDYSDITEVAEDESRRYKQAMGSLQPARRP
DEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATVSEDGDGIILPSIIAPSSAA
SDKVDFSSSSDSESEMGPQEARQAESKEGKLTLPLAGIMQRDATKQLPSVTELFPEFRPG
KVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQIQEGEVVVESGVEGKSPWEYEF
AAPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPAQLWYDMLGIP
EDGSGFDYGFKLKEKNEQEAEGHTDEGDAELTKEKDDLLADEHFLMVTQLQWEDDVIWNG
EDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNSPIPLAQKPNVAGVLG
IAKCKEKAPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLD
PNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKD
PWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKY
SFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEY
SEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAF
ENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQECPLYEVPGPNSKRANTHI
RDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWV
LKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKI
DDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQP
VKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGP
MSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKN
IENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKDRGKKDRRDKKGLSSAASATS
HKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYCRIRTTKDEE
FIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKC
GACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIV
LGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVT
LSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREE
FREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQ
VAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKHKYQN
RETFLDDVNLILANSIKYNGSDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKEA
ALEEADLESLDPMTPGPYTPQPPDLFDTSTSLSVSHGASFYQDESNLSAMDTPITTTGKR
GTQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSAQQPQASV
LYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVEPNAVRPKQPHVLQENTRMGM
DNEESMMSYEGDGGETSHVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEEEEE
QQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggaggcggacggcgcccgcgccgagcccttctccctg
gccggcttcctcttcggcaacatcaatgaggcggggcagctggaaggggacagcgtcctc
gacaaggaatccaagaagcacctggccgggctgggcgtgctggggctgggcaacctcatc
accgagatcacggccagcgaggaggagagcgccgagagcgagggagcgcacctggacgag
gaaggctgggttaagagcacagaggatgctgttgattactcagacatcactgaagtggca
gaagatgagagccgtcggtacaagcaggcgatgggcagcctgcagccggctcgaaggcca
gatgaagatgaggatgattatgatgctgactgtgaagacatcgattccaagctgatgccg
ccaccaccaccacctccagtacctggaaaaaaagaagatgaaaaggacgcagctgccact
gtatctgaagatggagacggtatcattttgccctccatcattgctccttcctctgctgcc
tccgacaaggtggatttcagcagcagctctgattctgagtcagagatgggacctcaagaa
gccaggcaggcagaatccaaggaaggcaaactcacacttcctcttgcaggaatcatgcag
cgagatgctaccaaacagttgccaagtgttacagagctcttcccagaatttcgacctggc
aaggtgctgcgtttcctgcgtctctttggccctgggaagaacgttccgtcggtctggcga
agtgcccggaggaaacgcaagaagaagcatcgggagttggcacaggaagtgcagatacag
gagggtgaagttgtggttgagagtggagtggaaggaaaatctccttgggagtatgagttt
gctgctcctccccctcctgagcagtgcctttcagatgatgagattaccatgatggcacct
gtggagtcgaaattttcccagtcgactggtgacatagacaaagtgacagacacgaagccc
aaggtggccgagtggcgctacggccctgcccagctctggtacgacatgctgggcatcccc
gaagacggcagcggcttcgattatggcttcaagctgaaggagaagaacgagcaggaggct
gaaggacacacagatgagggggatgcagaattgacgaaggagaaggatgatctgctagct
gatgagcacttcctcatggtgacacagctccagtgggaggatgatgtcatctggaatggg
gaggatgtcaagcacaaagggactaagacgcagcgtgcgagcttggcgggctggctgcca
tccagcatgaccagaaatgccactgcatacaatgcccaacaaggtttgaaccgcagtggc
tctttgctcaattcaccaattcctctagcgcagaaacccaatgtagcaggagtcctgggc
atagcaaagtgcaaggaaaaggcccctgaacagcaagtttccctggatgaagacaagccc
tggtactccattttcccaattgataatgaagagttagtgtatggccgttgggaagacaat
atcatctgggatgaccaagcaatggaaacctacttggatccccctgtcttaacacttgat
ccaaatgatgaaaacataattctagaaattcctgatgaaaaggaagagatgactttgaac
tctccatccaaggagaacaagaaagagtcttctctaaagaagagtcgaatcctgttggga
aaaacaggtgtcatcaaggaagaaccacagcagaacatgtctcagccagaggtgaaagat
ccctggaacctctccaatgatgagttttactatcccaaacagcagggacttcgaggaacc
tttggaggcaacatcatccagcactctatcccagcagtggagctccgccagccattcttt
cccacccacatgggtcccatgaagctccgacaattccatcggcctcccctgaagaaatat
tcctttggtgccttgtcccagcccgggccccacgctgtgcagcctctgctgaagcacatc
aagaagaaagccaagatgagggagcaggagcgccaggcctctggcgggggggagatgttc
ttcatgcgcacaccacaggacctcactggcaaggatggagatctcatccttgctgagtac
agtgaggagaacgcccctctgatgatgcaggttggcatggcaacaaagattaaaaattac
tacaaaaggaaacctggtaaagatccaggagctccagactgtaaatatggagagactgtt
tattgtcacacttctccgttcctgggttctctgcatccaggccagttactccaggcattt
gagaacaatctcttccgggcccccatctatttgcataagatgcctgaaacagatttcctg
atcatccgtacacgacaaggctactacattcgagaattagtggatatttttgtagttggg
caggagtgcccactctatgaagtacctggtcccaactctaaacgagctaacacacatatc
agagatttcctgcaggtttttatctaccgcctcttctggaagagcagagaccgtccccgg
aggatccgcatggaggacatcaagaaggcctttccctcccactccgagagcagcatccgg
aagcggctgaagctctgtgctgacttcaaacgcacagggatggactccaactggtgggtt
ttaaagccggatttcaggttgccaacagaggaggagatcagagccatggtgtccccagag
cagtgctgtgcctattacagcatgattgcggctgagcagcggctcaaggatgcaggttac
ggggagaaatccttttttgctccagaagaggagaatgaagaggatttccaaatgaagatt
gatgatgaggtgcgcacggctccctggaacaccacacgagcctttattgctgctatgaag
ggcaagtgcctcctagaagtgactggtgtcgcagatcccaccggttgtggggaaggattt
tcctatgtcaagattccaaacaaaccaacccagcagaaggacgataaagagcctcagcca
gtgaagaagacagtgactggcacagacgcggatctgcgccgactttccctgaaaaatgcc
aaacagcttctgcggaaattcggagtccctgaggaggagataaagaagctgtcccggtgg
gaggtgattgatgtggtccgtacgatgtccacagagcaggcacgctcaggggaagggcct
atgagcaaatttgcccgtggctctcggttctctgtggcagaacatcaggagagatacaaa
gaagagtgtcagcgcatctttgacttacaaaataaggttctggaatccactgagatcctg
tcaacagacacagatagcagttcagctgaagacagtgactttgaagagatgggaaagaat
attgagaatatgttacagaacaagaaaactagttctcagctctctcgggaaagagaagag
caggaacggaaggaattgcaaaggatgctcctgggagaagacagtggcaatgacaaagac
agaggcaaaaaggacaggagagacaaaaaggggctgtcttcagcagcctcagcaacctct
cacaaggatgatgacaccgcctctgtgaccagcctgaactcctctgccaccggccgccgc
ctcaagatctatcgcacgttcagggacgaggatgggaaggaatacgtgaggtgtgagacc
gtgcggaagcccgcggtcatcgacgcctactgccgcatacggaccaccaaggatgaggag
ttcatacggaagtttgctctgtttgacgagcagcaccgtgaggagatgcggaaagagcgg
cgcaggatccaggaacaattgcggcggctgaagcggaatcaagaaaaagagaagctcaag
ggccctccagaaaagaagcccaagaaaatgaaggagcgtccagacttgaaactgaaatgt
ggagcatgtggtgcaatcgggcacatgaggactaataagttctgccctctttactaccaa
acaaatgccccaccttctaatcctgttgcaatgacagaggagcaggaggaagagctggaa
aaaacagtcattcacaatgacaatgaagaactcatcaaagtagaaggaacgaaaattgtc
ctgggaaaacaactgattgagagtgcggatgaggtccgcaggaaatccctggtcctgaag
tttcctaagcagcagcttcctccgaagaagaagcgtcgtgtagggacgacggtgcactgt
gattatctgaatcgtccccataaatccatccaccggcggagaacagatcccatggtgacg
ctctcatccatcttggagggcatcatcaatgacatcagggatcttcccaatacatacccc
ttccacacgcctgtaaatccaaaagttgtcaaagattattataagatcattacccggccc
atggatttacagaccctgcgtgaaaacgtccgtaagcggcagtacccatcccgggaggag
ttcagggaacacctggagctcattgtgaagaacagtgccacatacaatgggccaaagcac
tcactgacacagatatcccagtccatgctggacctgtgtgatgaaaagctgaaagagaag
gaagataaactggctcgattagaaaaagcaattaatcctctcctggatgatgatgaccaa
gtggccttttccttcattttggataacattgtgactcaaaagatgatggcagttccagat
tcttggccgtttcaccatccagttaataaaaagtttgttcctgactattacaaggtgatt
gcaaacccaatggatctggagaccatccgcaagaatatctccaaacacaaataccagaac
agggagactttcctggatgatgttaacctcatccttgccaacagcattaaatacaatggg
tcagacagccagtacacaaaaacagcccaggagattgtaaacatctgttaccagacttta
gctgagtatgatgagcacctgactcaactcgagagggacatctctactgctaaggaagca
gcactggaggaggcagatctggaaagtcttgatcctatgacccctggtccctacactcca
cagccaccagatttgtttgataccagcacttccctcagtgtgtcccatggtgcttcattc
tatcaagatgaaagcaatttgtctgctatggacactcccatcactaccacagggaagcga
ggaactcagatgcgccaggggcgaggtcggctgggcgaggaagactctgatgtagatatt
gaaggctttgatgaggatgatgatgggaagcctaaaactccagccccagaagtcgaagat
gcagatggtgaccttgctgatgaagaagaaggatcagcccagcagccccaggccagtgtc
ctctatgaagacctgcttatgtctgatggagaggatgatgatgatgggagtgatgaagag
ggagataatcctttctcgtctatccagctgagtgagagtggcagtgactcagatgtggag
cccaatgcagtgagacccaaacaacctcatgttcttcaagagaacacaaggatgggcatg
gacaatgaagaaagcatgatgtcctatgaaggagacggtggggagacatctcatgttatg
gaggacagcaatatcagttatggcagctacgaagaaccagacccaaagtccaacacaaga
gacacgagtttcagcagcattggagggtatgagatctcagaagaggaggaagaggaagaa
cagcagcgctctgggccaagtgtgttaagtcaggtccatctgtctgaggatgaggaggac
agcgaggactttcactccattgcaggagacagtgacctggactcagatgaatga
DBGET
integrated database retrieval system
