Aphelocoma coerulescens (scrub jay): 138112958
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Entry
138112958 CDS
T10543
Symbol
CHRNA1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
acoe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
138112958 (CHRNA1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138112958 (CHRNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138112958 (CHRNA1)
Ion channels [BR:
acoe04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
138112958 (CHRNA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Motif
Other DBs
NCBI-GeneID:
138112958
NCBI-ProteinID:
XP_068876720
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All DBs
Position
7:17902492..17925705
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AA seq
519 aa
AA seq
DB search
MDHSREYLFTYSKISHPSVKPREQPPPSMRSVLWRGCFRNKLLGSVLSQRNKTLNLASFS
VHKEVLRSHQDVQLLTAGLALCYEDETRLVEDLFKDYNKVVRPVEDHRDAVIVTVGLQLI
QLISVDEVNQIVTTNVRLKQQWTDVNLRWNPDDYGGVKKIRIPSDDIWRPDLVLYNNADG
DFAIVKYTKVLLEHTGLITWTPPAIFKSYCEIIVTHFPFDQQNCSMKLGTWTYDGTVVVI
NPESDRPDLSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNV
IIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYM
LFTMVFVIASIIITVIVINTHHRSPSTHTMPHWVRKIFIDTIPNVMFFSTMKRPSRAKQD
KNIFAEDIDISDISGKSGSVPVNFYSPLTKNPDVKNAIEGIKYIAETMKSDQEASNAAEE
WKFVAMVLDHLLLGIFMLVCFIGTLAVFAGRLIELNQQG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatcactctcgagaatatttgttcacttattcaaagatttcccatccctctgtgaag
ccaagggagcagcctcctcccagcatgaggtctgtactctggcgagggtgtttcagaaat
aaattactgggatctgttttgtctcagagaaacaaaaccctaaacctggcaagtttctct
gttcacaaagaggttctgagatctcaccaagatgttcagttacttacagctgggctggcc
ctgtgctatgaagatgagactcgccttgtggaggacttgttcaaggactacaacaaggtg
gtgcgccccgtggaggaccatcgggacgccgtcattgtcaccgtggggctgcagctcatc
cagctcattagcgtggatgaagtaaatcagattgtgacaaccaacgtacgcctgaaacag
caatggacagacgtcaacctcagatggaatccagatgactacggtggcgtaaaaaaaatc
cgcatcccctcagatgatatctggaggccagaccttgttctttacaacaatgcagacggt
gattttgccattgtaaaatacaccaaagtccttctggagcacacaggtctgatcacctgg
acaccaccagctatttttaagagttactgtgaaattatagtcacacacttcccatttgac
cagcagaactgcagtatgaagttgggaacctggacatatgatggtacagtggttgtcatt
aacccggagagtgatcgtccagatctgagtaacttcatggagagtggggagtgggtgatg
aaggattaccgtggctggaagcactgggtttactatgcttgctgccctgacaccccttac
ctggacatcacctaccacttcctcatgcaacgcctgcctctctacttcatcgtgaacgtc
atcatcccctgcctgctcttctcctttttaacagggttagttttttacctacccacagat
tcaggtgagaaaatgactctcagcatctctgttctgctgtctttgactgtgttcctgctg
gtcatcgtggagctgattccctccacctccagcgcagtgcctctgatcggcaagtacatg
ctgttcaccatggtgtttgtcatcgcttcgatcatcatcacagtcatcgtcatcaacacc
caccaccgctcccccagcactcacaccatgccccactgggtcaggaagatctttattgac
acaatcccaaacgtcatgtttttctctacaatgaaacgaccatcaagagccaaacaagac
aaaaatatttttgcagaagatattgatatttctgacatttctgggaagtcaggttctgtg
cctgtcaacttctactcgccgcttaccaaaaatccagatgtgaaaaatgctatagaggga
atcaaatacattgcagaaacgatgaaatcggaccaagaagccagtaatgctgcagaagag
tggaagtttgttgcaatggtgcttgatcatcttctccttggcatatttatgctagtttgt
tttataggaacattagctgtatttgctggtcgccttattgaattaaatcagcaaggatga
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