Aphelocoma coerulescens (scrub jay): 138113129
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Entry
138113129 CDS
T10543
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138113129 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138113129 (CLASP1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
138113129 (CLASP1)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
138113129 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT_GCN1
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_MROH2B_C
TPR_CAND1
Sec7-like_HUS
HEAT_2
RTP1_C1
VPS15-like_hel
TPR_DNAAF5
Cnd1
Ltn1_1st
HEAT_DAAF5
PDS5
ParcG
MMS19_C
MMS19_N
XRN_M
HIGH_NTase1_ass
KH_DEAH11_1st
TAN
TPR_20
Motif
Other DBs
NCBI-GeneID:
138113129
NCBI-ProteinID:
XP_068877133
LinkDB
All DBs
Position
7:complement(28376596..28549665)
Genome browser
AA seq
1513 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDIISALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMVQTSVDKI
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAALGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLDGTTSKTEGRIRTRRQSSGSATS
VTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSSYGGLSSGTSRVQAVP
SSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADA
LLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAE
VLNHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLET
LVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILM
RFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVR
KTMHSWVGEDLPARTTTASSGPGEGNLEEKCKQAAQIVLISLFELNTPEFTMLLGALPKT
FQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTSPLTSPTNCSHGGLSPSMLD
YDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGLALPTGD
VRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYADTINTYDKTALKEAVF
DDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWEEHFK
TILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVR
AAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDI
IPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTN
SNSSSSSDVSTHS
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcctagcgcaggtgctgcagaaggatgttggaaagaga
cttcaggttggccaggaattgatagattatttctcagataaacagaagtcagctgatctt
gaacatgatcagactatgctggataaaatggttgatggactggccacttcttgggtaaat
tccagcaattataaggtggttctcctgggcattgacatcatctctgcactggtgtcccgc
ttgcaagatcgcttcaaggcccagattggcacagtgctgccaagtttgcttgataggctg
ggagattctaaggactcagtgagggagcaggatcagaccttgctgctgaaaatcatggaa
caagctgctaaccctcagtatgtgtgggacaggatgctaggaggattcaaacacaagaat
tttcggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactgagtaagatagtgccacatatatgtaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagccttgtggaaatttacagacatgttggtgaa
cgtgtaagggctgatctcagtaaaaaaggattaccccagtctcggttgaatgtaattttt
acaaaattcgatgaggtccaaaaatctggaaacatggtccagacttcagttgataaaatt
tttgatgatgaagactccgtggatgggaacagaccttcctcagccagctcctctacatct
tcaaaggcccctgcaaattcacgcagagttgggatgggcactacccgcagacttggctct
gcagctctgggctccaagtcttcaacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacggttcagatttattccagccgggatctt
gaggaatccataaacaagatcagagagatcctatcagatgataaacatgactgggaacag
agagtttctgcgttgaaaaagatccgctccttacttttggctggagctgcagaatatgat
aacttcttccaacacttaagacttttggatggagcatttaaattatctgctaaagacctg
cggtctcaagtcgtacgagaggcttgtatcacattgggacatctgtcatcagttctggga
aacaagtttgaccatggggcagaagccatcatgccaacaatttttaatctaattccaaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacacacg
cacatccctcggttaatacccatcataaccagtaattgtacctccaagtctgttgcagtt
agaaggcgctgctttgagtttttagacttgctgttgcaggagtggcagacacactcctta
gaaagacacatatcagtgttagctgaaacaataaagaagggaattcatgatgcagactct
gaagccaggatagaggcaagaaagtgctactggggtttccacagtcacttcagccgagag
gcagagcatttgtaccacaccttggagtcttcctaccagaaggccctgcagtcgcatttg
aagaactctgacagcatcgtgtccttgccacagtcagatcgctcctcctccagctcccag
gagagtctcaaccgtccactgtctgccaaaagaagtcctactggaagtacaacatctaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgtcgatgtgaatgcagcagctagtgccaagtcaaaagtgacgtcttctggagcatcc
acccccttcagttctgctgcagccttgcccccagggtcatacgcatcactagatggtact
accagtaaaaccgagggtcggattcgtaccaggagacagagctctggcagtgccacaagc
gtcacctcaacacctgctgatactcgaggccgcagccgggctaaagtagtttcccagtcc
cagcgatccagatcagctaatcctgctggtgctggtagccggtctagttctccgggtaag
ctcttaggaagctcctatggtggcctgagcagtggaacatccagagtccaggcagtgcca
tcatcctcagagaagcgcagcaagattcctcggagccagggatgcagtcgggagacgagt
cccaacagaataggcctagaccggtttggactcggacagccaggcaggatgcctgcttct
gtgaatgccatgcgagtcctgagcaccagcacagatctggaggctgctgtagccgatgca
ctgctgttaggagactccaggagcaagaaaaagccagtgagaagaagatacgagccctat
gggatgtactcggatgacgatgccaacagtgacgcatccagcgcttgctcggagcgctcc
tatggctccaggaacggcggcattccacactacctgcggcagactgaagatgtggctgag
gttctgaaccactgtgccagctccaactggtctgaaaggaaagaagggctcataggtctt
cagaatttactgaaaagccaacggacactgagccgagtcgaattaaaaaggctgtgtgaa
atatttactcgcatgtttgctgaccctcacagcaaggtcttcagcatgtttctggaaacc
ctggttgatttcatcatcattcataaagatgacttgcaggattggctttttgttctcctg
acccagttgctaaaaaaaatgggagcagatttgttggggtctgtgcaggcaaaagttcaa
aaagctctggatgtcaccagggattcttttccatttgatcagcaatttaacattttgatg
aggtttattgtagatcagacccagacaccaaacctgaaggtgaaagttgctatcctgaag
tatattgagtccttggcaagacagatggatccaacagactttgtgaactccagtgagaca
agacttgctgtatctagaattataacctggacaacagaaccaaagagctcagatgtgaga
aagacgatgcatagttgggtgggtgaggatttgccagctaggacaactacagcctcctca
gggcctggtgaaggaaacttggaagagaaatgtaaacaggcagcacaaatagtcctgatt
tctctctttgaactgaacactcctgagtttaccatgttacttggtgccttgccaaaaaca
ttccaggatggtgctaccaagctcctgcacaaccacctcaagaactccagtaacaccagt
gtgggttctcccagcaatacccttggtcggactccttcccggcactccagcagcagaacc
agccccttaacttcacctaccaactgttcccatggtggactgtctccaagtatgctggat
tatgacacggagaacctaaactctgatgaaatctacagctctcttcgtggagtcacagaa
gcgattgagaaatttagctttcgtagtcaagaggacctgaatgagccaatcaaacgtgat
ggaaagaaagactgtgacattgtatctcgagatggtggccttgctctccctactggtgat
gtccgtggaagcagtgacattgtggaaggtggaaggatggccctggataacaaaacctcc
ctcctgaacacccagcctccccgcgccttttcagggccccgtgctcgggaatacaacccc
tatccttacgctgacacaatcaacacttacgacaagactgcactgaaggaagcagtgttc
gatgacgacatggatcagcttcgggatgaagtacccattgaccattcggatttggtggct
gatcttctgaaagagctctccaaccacaacgagcgggtggaggagcggaaaggagctctc
ctggaattgctaaagatcacaagggaagataatcttggagtttgggaggagcatttcaaa
accattctgctcttgctgctggaaacgcttggagacaaagatcattcgataagagccctg
gctctgcgagtcctgagggagatcctacggaaccagccggcgaggtttaagaattacgcg
gagttgactatcatgaaaacactggaagcacataaggattcccacaaggaggtcgtcaga
gctgctgaagaagctgcttccaccctggcgagttccatccaccccgagcagtgcatcaag
gtgctttgccccatcattcagactgcagattatccaattaacttagctgccatcaaaatg
caaacaaaagtcatcgagaggatttccaaggaatcgttgcatcagctcctacccgatatc
attcctgggttgttacagggctatgataacacagagagcagtgtccgaaaagccagtgta
ttttgcctagtggctatttattcagtaattggagaagaactgaaacctcatctcgcacaa
ctcacaggaagcaagatgaagctactaaacttgtatataaagagggcccagaccaccaac
agcaacagcagctcctcttcagatgtttcaacgcacagttaa
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integrated database retrieval system
