Aphelocoma coerulescens (scrub jay): 138116380
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Entry
138116380 CDS
T10543
Symbol
SEMA4B
Name
(RefSeq) semaphorin-4B isoform X1
KO
K06521
semaphorin 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acoe04090
]
138116380 (SEMA4B)
CD molecules [BR:
acoe04090
]
Proteins
138116380 (SEMA4B)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF2627
Sema4F_C
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
138116380
NCBI-ProteinID:
XP_068881752
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Position
10:12906761..12918420
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AA seq
861 aa
AA seq
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MRWHGTGSYGCRVCSARAASRPRRSPAARSGMAARPVLPVLAALLLSAAPEPVPRVSLPY
DSAERVVRRFEAAGVSNYTALLLSPDGGTLYLGARELLLTLNTSNFQPSSPVRRLLWSAD
EEKKRQCVFKGKDPQRDCHNYIKLLLQLNSTHLYTCGTCAFSPACAYINVQHFSLERDAS
GKVVLEDGKGRCPFDPEYRSTAVMVDGELYAGTVSNFQGNEPTISRSQESRIALKTENSL
NWLQDPAFVGSAYLRESLPAGNPEGDDDKVYFFFSETGKEFDYFENTIVSRIARVCKGDQ
GGERVLQRRWTTFLKAQLLCSHPEDGFPFNVLQDIFVLTPGELRWRETLFYGVFTSQWNK
GGLGSSAVCAFPMRSVQRAFGGLYKEVNRETQQWYTDTGPVPEPRPGMCITSHTRHLKIN
SSLQMPDRVLNFIKDHFLMDSPVRSQPLLLQSHRRYQQIGVHRAQGLHSTYDVLFLGTDD
GRLHKAVRVNHGVHIIEEIRLFPAGQPILQLLLDQDQGLVYAATYTAVAQVPFANCSLYR
SCGECVLARDPFCAWSRGACRRVTPHPPAHPQLWAQDIEDADTERLCQLANASQPRPRIL
LPPASGAPCQQIQLPPNAVRPLPCRLLSNLASRRWLHDGAPVNASYLVLPDGALILVGSP
ERAGTYECWSLEEGFRKLMASYCVGVQEPALGPPDSGRKVAAGRDTLETVSTSRSTSAVG
SAAARLDGKTYWTEFLVMCVLFAAAVLVLALFVLHRHRDGMKALLEPSDPGRHQKPPRKP
VESLPLNGSSLPSTAPEHKGYQALQDNYIVSTPVHEPPGPPRTFSESEKRPLHVRDSFVE
VSPACQRPRVRLGSEIQDSVV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggcatgggacagggagctatggctgcagggtctgcagcgcccgggcggcttcg
cggccgcggcggagccccgcggctcggtccgggatggcggcgcggccagtgctgccggtc
ctggcggcgctgctgctctcggcggctccggagcctgtcccgcgggtcagcctgccctac
gactcagccgagagagtagtgcggcgctttgaggcagctggtgtgtccaactacacggcc
ctcctgctgagcccggacggtgggaccctctacctgggagcgcgggaactgctcctcacc
ctcaacaccagcaactttcagcccagctccccagttcgtaggctgctgtggagtgcagat
gaggagaagaagaggcagtgtgtgttcaagggcaaggacccccagagggactgtcacaac
tacatcaagctgctgctgcagctgaacagcacccacctgtacacctgtgggacctgcgcc
tttagcccggcctgcgcctacattaacgtgcagcacttcagcctggagcgggacgcgtcg
gggaaggtggtattggaggacgggaagggacgctgcccctttgaccctgagtaccgctcc
acagctgtcatggtcgacggtgagctctacgccggcaccgtcagcaacttccagggcaat
gagccgaccatctcccgcagccaggagagtcgaattgccctcaagaccgagaactccctc
aactggctgcaagacccagcattcgtgggctcagcctacctgagggagagcctccctgcc
ggcaaccccgagggcgacgacgacaaggtctacttcttcttcagtgagaccgggaaggag
ttcgactattttgagaacaccatcgtctcccgcattgcacgtgtatgcaagggggaccag
ggcggggagcgtgtgctgcagcggcggtggacaaccttcctgaaggcacagctcctctgc
tcacaccctgaggacgggttccccttcaacgtgctgcaggacatctttgtgctcaccccg
ggcgagctgcgctggagggagacactcttctacggtgtcttcacctcgcagtggaacaag
ggtggactgggcagctcggccgtctgcgccttccccatgcgcagtgtgcagcgtgccttt
ggtgggctctacaaggaggtgaaccgcgaaacgcagcagtggtacacagacaccggccct
gtgccagagccccggccaggcatgtgcatcaccagccacacacggcacctgaagatcaat
tcgtcgctgcagatgccagatcgggtgctgaactttatcaaggaccacttcctgatggac
agccccgtgcgcagccagcccctgctgctgcagagccaccggcgctaccagcagatcggt
gtgcaccgtgcgcagggcctgcacagcacctatgatgtcctcttcctgggcacggatgat
gggcggctgcacaaggctgtgcgggtgaaccacggtgtgcacatcattgaggagatccgc
ctcttccctgccgggcagcccattctccagctgctgctggaccaggaccagggccttgtc
tatgcagccacctacacagcagtggcccaggtgccctttgccaactgcagcctgtaccgc
agctgtggggaatgtgtgctggcacgggaccccttctgcgcctggagccggggtgcctgc
cgcagggtcaccccacatcccccggcacatccacagctctgggcacaggacatcgaggat
gctgacacggagcggctctgccagctggccaatgcctcccagccccgtcctcgcatcctc
ctgcccccagcctcaggtgcgccgtgccagcagatccagctgcctcccaatgcggtgcgg
ccgctgccgtgccggctgctctccaacctggcctcacggcgctggctgcacgacggggca
cctgtcaacgcctcctacctggtgctgcccgacggggccctcattctggtgggcagccca
gagcgtgcaggcacctatgagtgctggtcactggaggaaggattccgcaagctgatggcc
agctactgcgtgggtgtgcaagagccagcccttgggccaccagactctggcaggaaggtg
gctgctggccgcgacaccctggagacagtcagcacatcccggagcacgtcagcggtggga
agtgctgcagcacggctggacggcaagacctactggaccgagttcctggtgatgtgtgtg
ctctttgctgctgctgtcctcgtgctggccctctttgtcctgcaccggcatcgtgacggc
atgaaggccttgctggagcccagtgaccctggcaggcatcagaagccgccccgcaagcca
gtggagagcctgcccctgaatggcagcagcctgcctagcacggctcctgagcacaagggc
taccaggccctgcaggacaactacattgtcagtacccctgtgcatgagcccccaggaccc
ccacgcaccttctctgagtcagagaagagacctctccatgtccgggacagcttcgtggag
gtgtctcccgcctgccaaagaccccgggtgcgcctgggctccgagatccaggactcagtg
gtgtga
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