Aphelocoma coerulescens (scrub jay): 138118167
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Entry
138118167 CDS
T10543
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138118167 (CDX1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
138118167 (CDX1)
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
138118167
NCBI-ProteinID:
XP_068885109
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Position
13:complement(6885498..6897838)
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AA seq
259 aa
AA seq
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MYVGYLVDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFASYHHVPGINNDLHHGQPAA
AWGSPYTPAKEDWHSYGAAATPSTASPGQFGFSPPDFNPIQPPSSGLLPPPISSSVPQLS
PNAQRRTPYEWMRRSIPSTSNNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVSTLGPIGGLCSS
NAPNLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaggatatcttgtggataaggacaccaacatgtatcccagcccggtccggcac
cccagcctcaacctcaacccccagaactacgtgccggggccaccgcagtactcggacttc
gccagctaccaccatgtgccggggattaacaacgacctgcaccacgggcagccggcagct
gcctggggctctccctacacccctgccaaggaggactggcattcctatggggccgctgcg
acgccttccaccgccagcccggggcagtttggattcagccccccagattttaaccccatt
cagcctccgagctctggactcctgcctccacccatcagcagctcggtcccccagctctcc
cctaatgcccagagacgcaccccatacgagtggatgaggcgcagcattcctagcaccagc
aacaacggcaagaccaggacaaaagacaagtaccgggtggtgtacacggaccaccagcgc
ctggagctggagaaggagtttcactacagccgctacatcaccatccgccgcaaggccgag
ctggccgcggccctcgggctgaccgaacggcaggtgaaaatctggtttcagaatcggagg
gcgaaggagaggaaggtgaacaagaagaagctgcagcagcagagccagcccaccagcacc
accacgcccaccccaccagctgtcagcacactgggacccatcggaggcctctgcagcagc
aatgcccccaacctcgtctcctcatctccactgacgatcaaggaagaattcatgccttaa
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integrated database retrieval system
