Aphelocoma coerulescens (scrub jay): 138119427
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Entry
138119427 CDS
T10543
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Cilium and associated proteins [BR:
acoe03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
138119427 (TTC28)
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138119427
NCBI-ProteinID:
XP_068887397
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Position
15:complement(5486162..5601676)
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AA seq
2464 aa
AA seq
DB search
MEQQAPPPPPGAVAVGRARREQDAEPPRISFCGSKSFRRKSPDSPMLSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQL
QKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWS
LGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGSYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQE
LAEKSIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASSNLGIIHQM
KGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFVC
KRDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCDKALGYHTQELEVYQE
LGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMN
MNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGGL
HSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQYHQLDLQI
AEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQLYRASAL
FETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLG
DSLTENAGDFHEANSVALQTLTNSALEQHISSVREALGVDSYYTRACASSETESEAGDIM
DQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTMSPVKDGTSSLPRRQT
SFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYL
YERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSWKLAALVLTPNTDSNP
ASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSY
QESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYSSLLNGMKASAAL
GEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFP
TSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINRLHQVLVQLQAGEKEQ
DFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQATRRTMHFALQSL
LALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPTCPESIASDAISVYSL
SSIASSMSFVSKPENMLDGAGHRGRQDYERPKNIYPHRSAAQSQLSPQATAASKDEEEYE
GFSIISNEPLANYQENTKPRSSPDHKQPKTSQNGGIKVSVNSKGSISTPNSPVKMTLIPS
PNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQELAQKILEETQSHLIAV
ERLQRSSSQISKSNSSDDGAASPAGVSAFRSSETSAFSRPVSSSQRNQSSPLAIKPKPPT
RSSSLQKVSSGYNSPTTSEMSNREGTGQYSGQPSPGCDSHGSLTEQPPFKLKYPSSPYSA
HISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDIDKLKLAAIDEKVQAI
HNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPRHSKEESAEKLELKDLSI
GQHLAASPQKIPPNGHRRPETTNAMTPAHSSPGNTLGAVRPLRLPAGNGYKFLSPGRFFP
SSKC
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcgccgccgcccccgccgggggccgtggcggtgggccgggctcggcgg
gagcaggacgcggagcctccccggatttctttctgtggatcaaaatctttcagaagaaaa
agtcctgacagccccatgttgagcaaagctgaatttgttgagaaagttcgccagagcaac
caggcttgccatgacggcgatttccacaccgcaatcgtgctgtacaacgaggccttgggg
gtcgaccctcagaactgcattctctacagcaaccgctctgcagcctacatgaaaatccac
cagtatgacaaggccttggatgatgccatcaaagcacggctcctcaatcccaaatggccg
aaggcatacttccgacagggcgtggccctgcagtacctgggacgccatgcggatgcgctg
gccgcgtttgcgtcagggctggcgcaggatcccaagagccttcagcttctggtcggcatg
gtcgaggccgccatgaagtctcccatgagagagtccctggagcccacctaccaacaactg
cagaagatgaagctggacaagagcccctttgttgtggtgtctgtgattggccaggagctc
ctgactgcaggccaccacggggcctctgtggtggtgctagaggctgccctgaagattggc
acttgcagcctgaagctgcggggatcagtgttctctgcactgagcagtgcatactggtcc
cttgggaacacagagaaaagcactggatacatgcagcaggacttggacgtagccaagagt
ttaggtgaccagacgggagaatgccgagctcatggaaatctgggctctgcattcttctcc
aaaggaagttaccgggaagcccttactaaccacagacatcagctggtgcttgccatgaag
ctcaaggacagagaggcagcatcctcggcactgagcagtctgggccacgtgtacacagcc
atcggggactacccaaatgctctggctagccacaagcagtgtgtcctccttgccaagcag
tccaaagatgagctctccgaggcacgggagctgggcaacatgggagcagtgtacattgca
atgggggattttgaaaatgcagtgcagtgccacgaacagcacctgaagattgccaaggag
ctggggaacaagcgggaggaagctcgagcctacagcaacctgggcagtgcttaccactac
cgcaggaacttcgacaaagccatgtcctaccacaactatgtgttggagttggcccaggag
ctggctgagaagtccattgagatgcgagcttacgctggcctgggccacgcagctagatgt
atgcaagatctggagagggctaagcagtaccatgaagaacagttgcacattgctgagagc
ctgcaggaccgagctgctgaaggcagagcctcctccaatctaggaatcattcaccagatg
aaaggtgactacgacactgcgctgcggctgcacaagacacacctgtccatagctcaggag
ctgagcgattacgcggcccaaggccgggcctacggcaacatgggcaacgcttacaacgcc
ctcggcatgtacgaccaggctgtcaagtaccatcggcaggagctgcagatttccatggaa
gtcaacgaccgtgcttctcaggcatccacacacgggaacttggcggttgcctatcaggca
ctgggtgcccatgaccgtgctctgcagcactaccaaaatcatctcaacattgctcgggag
ctgcgggacatccagagtgaagcgcgagccctcagcaatttgggcaacttccactgctcg
cgaggagagtacgtgcaggcggccccgtactatgagcagtacctgcgcttgtccccggag
ctgcaggacatggaaggggaggggaaagtttgccataaccttggctatgcccattattgc
ctcgggaactatgaggaagctgttaagtactacgagcaggatcttgccttagcaaaggat
cttcatgacaagctgagccaagccaaagcctattgcaacctgggcctggccttcaaagcc
ttgatggacttcagcaaagcagaggagtgtcaaaagtacctgttgtccctggcacagtct
ctgaacaattcccaggccaaattccgagctctggggaacttgggggatatttttgtctgt
aaaagagatgtacacggtgcaataaaattttatgagcagcagttgagcttagcccatcat
gttaaagacaggagactggaagccaatgcctatgcagccctgggctctgcatacaggatg
gtacagaagtgtgacaaggctttaggttaccacacgcaggagctggaggtgtaccaggag
ctgggggatatgtcgggtgaatgcagagcacatggtcaccttgctgcagtgtatatgtca
cttgggaagtacaccatggccttcaagtgctacgaagagcagctggagctggggcagaag
ttgaaggaccccagcatcgaagcccaggtctacggtaacatgggcattaccaagatgaac
atgaatgtcatggaggaagcaattggctactttgaacagcagctggccatgctgcagcag
ctcagtgggaatgaatccgtgttagatcggggccgagcgtatgggaacctgggagattgt
tatgaggctctgggagattttgaggaagctataaagtattacgaacagtacctgtctgtg
gctcaaagcctgaaccgcatgcaagatcaggcaaaggcctaccgaggcttgggcagtggg
cacagggctatgggaagtttacagcaggctctggtgtgctttgagaagaggcttgtagtg
gcacatgaactgggggaggcatttaacaaagcccaggcctacggggagctgggaggcctg
cacagccagctgggcaactacgagcaagccatctcgtgcctggagcggcagctgaacatc
gcccgggagatgaaggaccgagccctggagagcgatgctgcctgtggccttggcggggtc
taccagcagatgggcgagtacgagaccgccctgcagtaccaccagctggacctgcagatc
gccgaggagaccaacaaccccgccggccagggccgggcctacggcaacctgggccttacc
tacgagtccttgggcacctacgagagggcagtggtttatcaggaacagcacctcagcatt
gcagcacaaatgaacgaccttgtagccaaaacggtgtcttacagcagcctggggaggact
catcatgctttacagaactactctcaagctgtgatgtacctgcaggaaggactgaggctg
gcagagcagctgggacgcagagaagatgaagcaaaaatccgtcatggcctcggcctctcc
ctctgggcaagtgggaacctggaggagtcccagcaccagctgtaccgggcctctgcactg
tttgaaaccatccgacatgaggtgcagctgagcacggattacaagctgtcactcttcgac
ctgcagacgtcctcctatcaggccctgcagcgagtgcttgtcagtctgggtcaccatgat
gaggcattggcagtagcagagagaggacgaacaagggcttttgctgacctgctcgtggaa
cgtcagactgggcagcaggactcagatccctattctcccgtgacccttgaccaggtcctg
gagactgtgaatggccagaggggacttgttctttactactcactggctgcaggttatctg
tacagctggctgctggctcctggggcaggaattctgaaattccatgagtattatctgggt
gacagcctgacagaaaatgctggggacttccatgaagccaacagcgtggccctgcagaca
ctgacaaactcggcactggagcagcacatctccagcgtgcgggaggctctgggagtggat
tcctactacaccagagcctgtgctagcagtgagacagagagtgaagctggggatatcatg
gaccagcagtttgaggagatgaataacaagctgaactccatgactgatccaaccggcttc
ctgaggatggttagcaggaacaacctattaaacaggagctgccagagcatgaccagcctg
ttcagcagtaccatgtctcctgttaaggatggaacatcatcacttccaaggaggcagact
tctttcaccaaacccccactccgtgctctctatgacttgctgataggacccatggaagga
ggtttgatgcattccagtgggcctgttggccgccaccgtcagctgatcctggttctggag
ggagaactgtacctcattccttttgctctcctgaagggcagttcctccaatgagtacctc
tatgagcgcttcagcctcattgcagtgccgtccatccagtcactgaatcccagctccaag
tcccatgtgaggaagaatactcctgcttactccagttctacctcaatggcagctgttata
ggaaatcccaaactcccttcagcagttatggacaggtggctgtggggacctatgccctct
gcagaagaggaagcatatatggtatctgagttacttggctgccagcccctagtcggcagc
tcatcaacaaaagagagagtcatgagtgccctcactcaggcagaatgtgtccattttgca
acccacgtctcctggaaactggctgctttggtcctgacacccaacactgacagcaatcca
gccagcagcaagagttctttcgggaacccctacacaatcccagaatctcttaggatgcag
gatgatgccagtgatgtggagagcatctcagactgccctcctcttcaggagttcctgctt
acagcagctgatgtgctggatctgcgtcttcctgtcaagctagtggttcttggctcttac
caagagtccaacagcaaagtcacttctgatggagtcattggcttgacaagagcattcctg
gctgctggggctcaatgtgtccttgtgtcactctggcccattcctgtggctgcttccaaa
atgtttgtgcacgccttctattcctctctgttaaacgggatgaaagccagcgcagccctc
ggagaagcaatgaaaaccgtgcagagcagcaagcagttctcccatccagccaactgggca
ggcttcatgcttattgggagtgatatgaagctgaacagcccttcttcgctggtaggacag
gccctgactgagatcctgcagcaccctgaaagggcccgggatgctctgcgtgtcctgctt
catctggtggagaaatcattgcagcgaatccagaacgggcagcacaactccatgtacacc
tcccagcagagtgtggagaataaagttggtggcattccaggctggcaggcgctcctcacg
gcggtgggatttcggttggacccacctgccagtggcctcccagcagcagtgttcttccca
acctcagaccctggggaccggctgcagcagtgcagcaccaccatccagtccctcctaggt
ttgcctaaccctgcacttcaggcactttgtaaacttatcacagcttcagaaacaggagag
cagcttatcaacaggctgcatcaagtcctggttcaacttcaggcaggcgagaaggagcaa
gatttcccctctgcaccaatccaggtctccatcagtgtccagctctggaggctgcctggc
tgtcatgagtttctggcagctctaggttttgacctttgtgaagttggccaagaggaggtc
attctgaaaactgggaaacaagctaccaggaggaccatgcactttgctctacaatccttg
ctggcactttttgattctacagagctgcccaagcgccttagcctggacagttcctcatca
ctggagtcactggcttctgctcagtctgtttccaaccctgtaccccagtatcaaaaccct
ccattctctcctacctgtccagaaagcattgcctcagatgccatttctgtgtacagcttg
agctccattgcttcttccatgagctttgtttccaagccagaaaacatgctggatggggca
ggacacagaggacgccaggattatgagaggcccaagaatatctatccacacaggtctgca
gctcagagccagctgtcaccacaagccactgcagccagcaaagatgaggaagagtatgaa
ggtttctctataatcagcaacgaacctttggccaattaccaagaaaacacaaaaccaagg
tcttcccctgatcacaaacagcccaaaactagtcagaatggaggcattaaggtgtccgtc
aactccaaagggagcataagtactccaaattctcctgttaaaatgactctcatccccagc
ccaaattcacctttccaaaaagttgggaaacttgcaagttctgatactggggaatctgac
cagtctagcactgagactgacagcaccgtcaaatcccaggaggacagtaatccaaagctt
gatccgcaagagttggcccaaaaaattctggaggaaactcagagtcacctcattgctgtt
gaacgccttcagagaagcagcagccagatcagcaagagcaacagttcggacgatggcgct
gccagcccggccggcgtgtccgcgttccgctcctcggagaccagcgccttcagccggccc
gtcagctccagccagaggaatcaatcttcacctcttgcaattaaaccaaagcctccaacg
aggagttcatcccttcagaaggtgagctctggctataacagccccacaacatcggagatg
tcaaacagagaaggcacaggccagtacagtgggcagccatctccaggctgtgattcacat
gggtccctaactgagcagcctccctttaaactcaagtaccccagctctccttatagtgct
catatttctaaatcacccagaaatatctctcccagctcagggcatcagtctcctggtggc
agcactccttctcctgctctttcctattcctcagctggttctgctcgctcaagcccagct
gatgccccagacatagacaaattaaaattggctgccatcgatgaaaaagtgcaagcaatt
cacaacttaaagatgttctggcaaagcactccccaccactccactggcccaataaagatt
ctccgaggagctcctggaacaatgacttctaagaaagatgtcctcagcttgctcaattta
tctccacggcacagcaaagaagaaagtgcagagaagctggaactgaaggacctgtctatt
gggcaacaccttgctgcttcgccacagaagatccctccaaatggacacagacgccctgaa
accacaaatgccatgacaccagctcattcctcacctggcaatactctgggagccgtgcgt
cccctgagactgccagctggtaatgggtataaatttttgtcaccaggaagatttttccct
tcctccaaatgttga
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