KEGG   Adelges cooleyi (spruce gall adelgid): 126844288
Entry
126844288         CDS       T09500                                 
Name
(RefSeq) TAR DNA-binding protein 43-like
  KO
K23600  TAR DNA-binding protein 43
Organism
acoo  Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acoo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    126844288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoo03019]
    126844288
Messenger RNA biogenesis [BR:acoo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     126844288
SSDB
Motif
Pfam: RRM_1 TDP-43_N RRM_7 RRM_PARP14_3 Nup35_RRM_2 WD-like_fungi Itf52_C DUF1866
Other DBs
NCBI-GeneID: 126844288
NCBI-ProteinID: XP_050438326
LinkDB
Position
Unknown
AA seq 403 aa
MSFVQVSDTNDGDREIVDLPLEEDGTLLLSTLHAQYPDACGLKYVAPDNGRTRALRLAND
KLHPPNEEGWGDIVYFCSFNKDNGQKRKLNEEIESDVERAPKEQKSEATSTAWKNRDLLV
LGLPWKTTDEDLESYFSKYGELRMAQVKKSADGRSRGFGFIRFKEQESQVRSMLDSHVIN
GRRCEIKIPNIKDAFINEAPKKIFVGQLTESITQEDLEEYFKQFGDIVEVFVPRPFKGIA
FVSFTKSDSALTALDQDHTIKDVRLSVSVAMPKEKDQRFRRGRGSGGSSNYNSRMRGSRD
HYSSRGNYYDDGGWDDYDRGSYSDRYRDDNDRGSYSDRYRDDRYDRKPYSNDRSYGVWRK
NDYVDSSSSSQNKGGSSKIDPNLVAAVVEKTVRGVIGNMNNVM
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgtcgtttgtacaagtgtcggacacaaatgatggcgacagagaaattgtcgacttgcct
ttggaggaagatggtactctcttgttgtctactttgcacgctcagtatccagatgcgtgt
ggtctcaagtatgttgctccggacaatggcaggacacgagcattgcgtctagctaatgat
aaactacatccacccaacgaggaagggtggggcgacattgtttacttttgttctttcaat
aaagataacggacagaagagaaaattgaacgaagaaattgaaagtgatgttgagcgagca
cccaaagaacagaagtctgaggcgacatcaacagcttggaagaatcgtgatttacttgta
ctcggtttaccatggaaaacgactgatgaggacttagaaagttactttagtaaatacggt
gaactgcgcatggcacaagttaaaaaatctgctgatggccgatcaagaggatttgggttt
atacgtttcaaggaacaagagtcacaagtgcgatcaatgttagattcacatgtcattaat
ggaagacgatgtgaaataaaaattcctaatataaaggatgcatttataaatgaagctcct
aagaaaatatttgttggacaacttactgaaagtattacacaagaagatctcgaagaatac
tttaagcaatttggagatatagtggaagtttttgtaccacgtcctttcaaaggtattgct
tttgtgtcattcaccaaatctgactctgccctaacagccctcgatcaagatcacactatt
aaagatgttcgtctaagtgtttcggttgccatgcctaaagaaaaagaccaaaggttccgc
agaggtcgtggcagtggcggcagtagtaattacaatagccggatgaggggaagtcgtgat
cattatagtagccgaggcaattattatgatgacggtggatgggatgattatgaccgtggc
agctattctgatcgctacagggatgataatgaccgtggtagctattctgatcgctacagg
gatgatcgttatgacaggaagccgtacagtaacgatcggtcttacggagtttggcgcaaa
aatgattacgtcgattcatcttcttcgtctcaaaataaaggtggcagcagcaaaatcgat
ccaaatttagttgctgcagttgtagaaaaaacagtcagaggagtaattggaaatatgaat
aacgtaatgtga

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