Adelges cooleyi (spruce gall adelgid): 126844288
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Entry
126844288 CDS
T09500
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126844288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126844288
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126844288
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
TDP-43_N
RRM_7
RRM_PARP14_3
Nup35_RRM_2
WD-like_fungi
Itf52_C
DUF1866
Motif
Other DBs
NCBI-GeneID:
126844288
NCBI-ProteinID:
XP_050438326
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSFVQVSDTNDGDREIVDLPLEEDGTLLLSTLHAQYPDACGLKYVAPDNGRTRALRLAND
KLHPPNEEGWGDIVYFCSFNKDNGQKRKLNEEIESDVERAPKEQKSEATSTAWKNRDLLV
LGLPWKTTDEDLESYFSKYGELRMAQVKKSADGRSRGFGFIRFKEQESQVRSMLDSHVIN
GRRCEIKIPNIKDAFINEAPKKIFVGQLTESITQEDLEEYFKQFGDIVEVFVPRPFKGIA
FVSFTKSDSALTALDQDHTIKDVRLSVSVAMPKEKDQRFRRGRGSGGSSNYNSRMRGSRD
HYSSRGNYYDDGGWDDYDRGSYSDRYRDDNDRGSYSDRYRDDRYDRKPYSNDRSYGVWRK
NDYVDSSSSSQNKGGSSKIDPNLVAAVVEKTVRGVIGNMNNVM
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgtacaagtgtcggacacaaatgatggcgacagagaaattgtcgacttgcct
ttggaggaagatggtactctcttgttgtctactttgcacgctcagtatccagatgcgtgt
ggtctcaagtatgttgctccggacaatggcaggacacgagcattgcgtctagctaatgat
aaactacatccacccaacgaggaagggtggggcgacattgtttacttttgttctttcaat
aaagataacggacagaagagaaaattgaacgaagaaattgaaagtgatgttgagcgagca
cccaaagaacagaagtctgaggcgacatcaacagcttggaagaatcgtgatttacttgta
ctcggtttaccatggaaaacgactgatgaggacttagaaagttactttagtaaatacggt
gaactgcgcatggcacaagttaaaaaatctgctgatggccgatcaagaggatttgggttt
atacgtttcaaggaacaagagtcacaagtgcgatcaatgttagattcacatgtcattaat
ggaagacgatgtgaaataaaaattcctaatataaaggatgcatttataaatgaagctcct
aagaaaatatttgttggacaacttactgaaagtattacacaagaagatctcgaagaatac
tttaagcaatttggagatatagtggaagtttttgtaccacgtcctttcaaaggtattgct
tttgtgtcattcaccaaatctgactctgccctaacagccctcgatcaagatcacactatt
aaagatgttcgtctaagtgtttcggttgccatgcctaaagaaaaagaccaaaggttccgc
agaggtcgtggcagtggcggcagtagtaattacaatagccggatgaggggaagtcgtgat
cattatagtagccgaggcaattattatgatgacggtggatgggatgattatgaccgtggc
agctattctgatcgctacagggatgataatgaccgtggtagctattctgatcgctacagg
gatgatcgttatgacaggaagccgtacagtaacgatcggtcttacggagtttggcgcaaa
aatgattacgtcgattcatcttcttcgtctcaaaataaaggtggcagcagcaaaatcgat
ccaaatttagttgctgcagttgtagaaaaaacagtcagaggagtaattggaaatatgaat
aacgtaatgtga
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