Anopheles coluzzii: 120948853
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Entry
120948853 CDS
T07312
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
acoz
Anopheles coluzzii
Pathway
acoz03013
Nucleocytoplasmic transport
acoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120948853
09122 Translation
03013 Nucleocytoplasmic transport
120948853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120948853
03041 Spliceosome [BR:
acoz03041
]
120948853
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120948853
Spliceosome [BR:
acoz03041
]
Complex C
Other components
EJC/TREX
120948853
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120948853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
120948853
NCBI-ProteinID:
XP_040221574
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All DBs
Position
2:complement(48613354..48615699)
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AA seq
710 aa
AA seq
DB search
MSSNSSNFLVLLKTFTESLERAFAANDIEVLKADYDAARASDNDKKTALHQAFRDMLLTK
TEDIPAIERFISFAVNSCRKDMTVATMPVVLLGDIFDAVTLDRAEQIFTYVENNVAIWKE
ECFFTACKHNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIISEFNLEN
ITEYGMDGNEMAVDQLSGGADPEVDGEPAEENKLKIDYNLYCKFWALQDFFRNPNQCYNK
VQWKTFETHAKSVLSAFSSFKLEEHRASSTSSGPATKPSDVGGSATAAAAAANNCPMEED
QIRESGHFFAKFLTNPKLLSLQLSDSNFRRSVLVQFLILFQYLNSTVKFKAETHVLTQAQ
SDWLKETETQVYQLIEESPPNGKKFANTARHMLLREELWNSWKNEGCKEFKRPEAALEDT
SSSTAAVAGGAAAGGAATSAGSGRPPAKRPRKPLGDLIRDATKQGKFYMGNSEITRLWNL
CPDNLQACKGTDRNFLPSLETYLENPKEKQDPSFEWRALRLLARQSPHFFTLFNSPSYKV
ADYLESVRKKIQKDKLDIKLEHAIQEETAPTNAEQPEAEGEGLVGEEEHEQMDTELLKTE
QLTPEDKNTHKTLAVTKAQLSELAPSIGRDWKKLATKLGYSADEIQYFESEHATVADQCC
HLLTLWFDDDMDASLDNLAYILEGLDMIPAADAVKQMIALLSDKVEEVSE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaattcatccaattttctcgtgttactaaaaacgtttactgaatcgctggag
cgtgcatttgcggcgaatgacatagaggtgctgaaagccgattacgatgctgcgcgggcc
agcgacaacgacaaaaagacggcgctgcatcaagcgttccgcgacatgctgctcacgaag
acggaggacattccagcgatcgagcggttcatcagttttgcggtgaactcctgccgcaag
gatatgaccgtcgccacgatgccggtcgtgctgctcggggacatcttcgacgcggtcacg
ctagatcgggccgagcagatcttcacgtacgtggaaaacaatgtggccatctggaaggag
gagtgcttcttcaccgcctgcaaacacaatctgcttcgcatgtgcaacgatctgctgcgc
cggctttcccgctcccagaacacggtcttctgcggtcggatactgctgtttttggccaag
tttttcccattctcggagcgcagtgggctgaacatcatctcggagttcaacctggaaaac
atcaccgagtacggcatggacggaaacgagatggccgtggaccagctgtccggaggcgcg
gatccggaggtggacggagagccagcggaggaaaacaagctgaagattgactacaatttg
tactgcaagttttgggcgctgcaagactttttccgcaatccgaaccagtgctacaacaag
gttcagtggaaaacgtttgaaacgcatgccaaaagtgtgctgtcggcgtttagcagcttc
aagctggaggagcaccgtgcttcgtctaccagcagcggccctgccacgaagccgtcagat
gtaggaggctctgccactgccgccgccgccgccgcaaacaactgcccgatggaggaggat
cagattcgggagtcgggacactttttcgccaaatttctcaccaacccgaaactgctttcg
ctgcagctttccgattccaacttccggcgctcggtgctggtgcagttcctgatactgttc
cagtacctcaactccacggtaaagttcaaggcggagacgcacgtcctgacacaggcgcag
agcgattggttgaaggaaacggaaacgcaggtctaccagctgatcgaggaatcgcccccg
aatgggaagaagttcgctaacacggcgcgccacatgctgttgcgcgaggagctgtggaat
agctggaagaacgagggctgcaaggagttcaagcgcccagaggccgcactcgaggacaca
agctcgtcgactgctgcggtggccggtggtgccgcggcgggcggtgctgctacctcggca
ggaagtggtcgtccaccggcaaagcgaccgcgcaaaccgctgggcgatctgatccgcgat
gcgaccaagcagggcaaattctacatgggcaattcggagattacgcgcctgtggaacctt
tgtcccgacaacttgcaggcctgtaagggcacggatcgtaacttcctgccgtcgcttgag
acgtacctggagaatccgaaggaaaagcaggacccgtcgttcgagtggcgcgcgctgcgc
ttgctagcccgacagtcaccccacttctttacgctctttaactctccctcgtacaaggtg
gccgactatctggagagcgtgcggaagaagatccagaaggacaagctggacatcaagctg
gagcatgcgatccaggaggaaacggcaccgaccaacgccgaacagccagaggcggagggt
gagggtctcgtcggtgaggaggagcacgagcagatggatacggagctgctgaagacggag
cagcttacgccggaggacaaaaacacgcacaaaacgctcgccgtgacgaaggcgcagctg
tccgagttggcgccgagcatcgggcgggactggaagaagctggcgacgaagctcggctac
agcgcggatgagatacagtactttgagtcggagcacgcgaccgttgcggaccagtgctgc
cacctgctgacgctatggttcgacgacgatatggatgcaagtttagacaatttggcctac
atactggaaggcttggacatgataccagcggccgatgcagtgaaacagatgattgccctg
ctctcggacaaggtggaagaggtgtcggaataa
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