Anopheles coluzzii: 120958962
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Entry
120958962 CDS
T07312
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120958962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120958962
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120958962
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120958962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
120958962
NCBI-ProteinID:
XP_040237992
UniProt:
A0A6E8VWT9
LinkDB
All DBs
Position
3:complement(24566207..24580060)
Genome browser
AA seq
2498 aa
AA seq
DB search
MNQEPFTYALSQIAHLVSNVNKKNSPATARQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
THSAARGYCQARLLATELASLTNKPQLVANVCFAVDNPFPQQKSLKPTSNLLAQISKTLS
CTPIQETALSIALLHSEQPEIVRFAEAHLKNCLTELIESYIDSDSGSNNVEGSLNDVSPE
FLQQILSLISYGRHTALGLTDQTYERFRSQLCRDFPRDRVPLILAPLLYAESSEISAEIL
KLNTHSILQSSIMKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGRDITPQDVAKIVSSMC
LTHESLSESSINLPTPSAFWPQGSGDPSGQKGKDGNGGSSASEVTTWKPEVLVQALKEVV
PALNWKEVCVALDHPEFLLKDRAGLSLLLTIVKMGMQASNMGQTFPVECLYQRWTNVEGQ
LSIISLILKNSDLYSFADHIYTSVSLDLLKTPPETDSKEVACWMSLHLVDVLLYIADHAN
LSEKVMKIFKVPGSLCPDVLFLALLQINPPMTTARQELFTNLVPIFLGNHPNAGTILHHA
WNHSTFNVTLRPIILHAMSDWYMVGEGDQSRLSRILDVAQDLKALSNLLNIRTYMFIIDL
ACLASRREYLKLEKWLADKIRDHGEPFVKTILKFLQRRCPQILGGKYSEEQIPKSSQLPP
ETLITILNCLQACIASCTPEVADMIHSMMQYGMLLNSKSRAQQQQQQQQAPQQQQQPPPP
GVLRSHRGLEAFGANAMGSQLLPPMVDSLNSLTANIGGLSIGGPGGGNSAFSFNNIIATP
PSPSRLLPSSSPFPMMPLPPGAAAAAQAGTLSRLQQTPNDKLGAAAAAGAAGIPTQALAP
FTADAPLPVSKEVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHENDVYQCM
LRNLFEEYKFFPQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKPEGTKM
YYFGITALDRFKNKLHLYPKYCEYVHSIAHFSEFPAHLIEYIEYGSQGQEPPNKTLGPGP
LPPSILQFMPSGAAGRGGPVGNPLYRSNSVTGTSNLTLAGVSTSASAAAAAAAAAAAAAA
AAGGAGAGTPGKINLSAQLIPPGAAGGGAAGASGGAGAGVAGSSGNSGGTGGSSGGGQPP
RVKSIANATNIDTLLVATQDREEKIIAPPDAIQDKTAFIFNNLSQINLQQKCEEIKEILQ
KDYYTWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEINRLVTKETFRNIRVLLRSDKGI
ANFSDRSLLKNLGHWLGMMTLGRNKPILHLDIDVKSLLVEAYNKGQQELLYVVPFVAKVL
ESCAKSKVFKPPNPWTMSIMNVLAELHQEPDLKLNLKFEIEVLCKNLNIDVSDLKPAIYL
KDPERAQNIEYQLSQPKPPKETAAAAVMGGAGVAGLGVGGNVGGGGGGGGGGGVVAVVPQ
LPPGAGPDDMGSSGPSSSPANVAMDPALAATGPPEPRFHYSDINIANPSLNAQHIVYHPT
VAILHTQTHLKVIVKSCLERTISEWISLIVDRSVKIASKTTEQIVRKDFALDSDETRMRR
SAHNMARSLVAGMAMITCRDQMVQTIQNNIKVAFAAAVGSAQKEAIIEHAAQQLAMDNIE
LVTAFIQKTAIEKVAIEMDKILAEDFQLRKLARQEGRRYWDAAVLSYHAERMPERIKLNV
GGVSPSQLAVYEEFSRNIPGFLPITERDAAQFAPKMAEMLPFVATPDEIGAIYDELASKM
DTFIKTTRLVPILQLHTNNMEQLLECLIHAHRSLDNLTGCTLLNKAVEGLLEGLINIPDQ
IEHVKLYRDIHLRVMRLMQDHRLFGPMWTNKAITRYMLECREELRYNVEAVDLLITSNFV
NMQQFDMMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHNSAITENDLAGTIEMLHRLTAH
PRAPEGLTHLIEMLRANHDPNSFLMDRAIVGPTSYIHAGVAQARSDIDDSPGFLERAEFL
LKDWVTIALSPNTCRDPLKGFSVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLTYRNMN
EPNAKTKIFQFIDAYVRLIALLVKHSGESGSTNTKLNLLNKILGIIIGILLHDQEVHTTA
FQQVGYHRIFAMLFLELTTHDPILENISISVITAFCHTFHILRPSAAPGFCYSWLELIAH
RVFIGRVLAQIPQQKGWHMYSQLLIDLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLLH
DFPEFLCDYHFAFCDVIPSNCIQMRNLILSPYPRNMRLPDPFTPNLKVDMLNDIGGSPRI
SINYASSIQPVSFKKDLDSYLKARAPVTFLSELRSNLQISNEVGSRYNIPLMNALVLYVG
TQAIAHIRSKNLGPTMSTIIHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHY
FSCCILYLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFV
HCAPEIERLFESVAKSCMVTSKSQQQIQNVEPDITECS
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcgctcacttagtgtcgaacgtg
aacaagaaaaactccccggccacagcacgtcagctagcgcagctggtgaaggacttcgga
ctagaggccgaccgtcacttgctgcgttgtctgttctcctcgatcgacttcggggacgcc
acacattccgccgccaggggttattgccaggctcgcttactggccacggaactcgcgagc
ctgacaaataaaccgcagctggtcgccaacgtttgcttcgccgtcgacaatccgttcccg
cagcaaaagtccctgaagccgacgtcgaacctgctggcacagatctcgaaaacgctctcc
tgtacaccgatccaggaaacggcgctttcgatcgctttgctgcactcggaacagccggag
atagtgcggtttgcggaagcgcatcttaagaactgtctcaccgagctaatcgagagctac
atcgactctgactcgggtagcaacaacgtagagggcagccttaacgacgtatcgcccgag
tttctgcagcagatactgtcgctcatctcgtacggccggcacaccgccctcgggcttacc
gaccaaacgtacgagcgcttccggagccagctgtgccgcgactttccgcgcgaccgcgta
ccgctcatcctagcgccgctgctgtacgcggagagttcggaaatttcggccgaaatattg
aagctcaacacgcacagcatcctgcaatcgtcgatcatgaaaacgtcctggaccaatctg
gtcgtggaggtgggctactcgttcaccgcgacgctcgacgactgccggaaccatctgctg
aaggtgggcgggcgcgacatcacaccgcaggatgtggcgaagattgtgtcgtccatgtgc
ctgacgcacgagtcgctgtccgagagtagcattaatctgccgacgccgagcgccttctgg
ccgcagggcagtggcgatccgtccggccagaagggcaaggatggcaatggggggtcgtcc
gcgtcggaagtcaccacctggaagccggaggtgctggtgcaggcgctgaaggaggtagtg
cctgcccttaactggaaggaggtgtgcgttgcgctggaccatccggagtttctgctgaag
gaccgggccgggctgtcgctgctgctgacgatcgtgaagatgggcatgcaggcgagcaac
atgggccaaaccttcccggtggagtgtctgtatcagcggtggacgaacgtcgagggtcag
ctgtcgatcatttcgctgatactgaaaaactccgacctgtactcgttcgccgaccacatc
tacacgagcgtgtcgctcgatctgctgaagacgccgccggagacggacagcaaggaggtg
gcctgctggatgtcgctccacctggtggacgtgctgctgtacatcgcggaccatgcgaac
ctgagcgagaaggtgatgaagattttcaaggtgcccggttcgctctgcccggacgtgctg
tttctggcgctgctgcagatcaacccgccgatgacgacggcccggcaggagctgttcacc
aatctggtgccgatctttctcggcaaccatccgaacgcgggcacgatactgcaccacgcc
tggaaccattccacgttcaacgtgacgctgcgcccgatcatcctgcacgccatgtccgac
tggtacatggtcggggagggcgaccagtcgcggctgtcccgcatcctcgatgtggcgcag
gacctgaaggcgctgtccaatctgctcaacattcgcacgtacatgttcatcatcgatctg
gcctgtctggcgtcgcgccgcgaatacctcaagctggagaagtggctggcggacaagata
cgcgaccacggcgaaccgttcgtgaagacgatactgaagtttctgcagcgccgctgcccg
caaatcctgggcggcaagtacagcgaggagcagatcccgaagtcgtcccagctgccgccc
gaaacgctcatcaccatactgaactgtttgcaggcgtgcatcgcgagctgtacgcccgag
gtggcggacatgatccacagcatgatgcagtacggtatgctactcaattcgaagtcgcgc
gcccaacagcagcaacagcagcagcaggcaccccagcagcagcagcagccgccgccgccc
ggtgtgctccggtcgcaccgcggcctggaagcgttcggggccaatgcgatgggcagccag
ctgctgcccccgatggtggactcgctcaacagcctgacggcgaacattggcggccttagc
atcggtggccccggcggcggcaacagtgcgttcagcttcaacaacatcattgcgacgcca
ccgtcgccctcgcgcctgctgccctcgagcagcccgttcccgatgatgccgctgccgccc
ggtgcggccgccgctgcccaggccggcacgctcagccggctgcagcaaacgccgaacgat
aagctcggggcggcggcggccgccggcgccgccggcattcccacccaggcgctcgccccg
ttcacggccgacgcaccgctgcccgtctcgaaggaggtggaggacgaggcgaacagctac
ttccaacgcatctacaacctgccgccgcatccgacgctgtcgatcgacgaggtgctggac
atgctgcagcgctacaaggactcgccgaaccggcacgagaacgacgtgtaccagtgcatg
ctgcgcaacctgttcgaggagtacaagtttttcccccagtacccggacaaggagctgcag
acgacggcccagctgttcggcggcatggtggagcgcaatctcgtcaccacgtacgtggcg
ctcgggctggcgctgcgctgcgtgctcgatgcgctgaaaaagccggaaggcacgaagatg
tactacttcggcattaccgcgctggaccggttcaagaacaagctgcacctgtacccgaag
tactgcgagtatgtgcactcgatcgcgcactttagcgagttcccggcgcacctgatcgag
tacatcgagtacgggtcgcagggccaggagccgccgaacaaaacgctcggcccgggaccg
ctgccaccgtcgattttgcagttcatgccgagcggcgcggccggtcggggtggaccggtg
ggtaatccgctgtaccggagcaactccgtcaccggcacgagcaatcttacgctggccggt
gtgtctacgtccgcttcggctgcggctgcagccgcagctgccgcagccgccgccgctgct
gctgccggtggtgccggtgcgggtacgcctggaaagatcaatctttccgcccagttaatc
cctcccggtgctgccggcggtggagcggcaggtgctagtggtggggcgggtgcaggtgtt
gccggctcaagcggtaacagtggtggcactggtggaagcagcggtggtggacaaccgccg
cgcgtcaaatcgattgcaaacgcaaccaacatcgacacgctgctggtggcgacgcaggac
cgggaggagaagatcattgcgccgccggacgccatccaggacaagacggcgttcatcttc
aacaacctgagccagatcaatctgcagcagaagtgtgaggagatcaaggagatactgcag
aaggattactacacctggctggcgcagtatctcgtgctgaagcgtgcctcgatcgaggtg
aacttccacgtgctgtactcgaactttctcgatgcgctcaagataccggaaatcaaccgg
ctggtgacgaaggaaacgttccgcaacatacgcgtgctgctgcggtcggacaagggcatt
gcgaacttttccgaccgctcgctgctgaagaatctcggtcactggctgggcatgatgacg
ctcgggcgcaacaagccgatcctgcacctggacatcgacgtgaagtcgctgctggtggag
gcgtacaacaagggccagcaggagctgctgtacgtcgtgccgttcgtggcgaaggtgctg
gaatcgtgcgcgaagagcaaggtgttcaagccaccgaacccgtggacgatgtcgatcatg
aacgtgctggcggagctgcaccaggagccggacctgaagctgaacctgaagttcgagatc
gaggtgctgtgcaagaacctcaacattgacgtcagcgacctgaagccggccatctacctg
aaggacccggagcgggcgcaaaacatcgagtatcagctgtcgcagccgaaaccaccgaag
gagacggccgccgcggcggtgatgggtggtgcgggcgtagccggactcggtgtcgggggt
aatgtgggcggcggtggtggaggtggtggtggcggcggtgttgttgccgtcgtgccgcag
cttcctcccggggccggcccggacgatatgggctcgagcggaccgtccagctcgccggca
aacgtggcgatggatccggcgctggcagcgaccggtccacccgaaccacgcttccactac
tccgacattaacattgcgaatccgagcctgaacgcgcagcacatcgtttaccatccgacg
gtggcgatcctgcacacccaaacgcacctgaaggtgatcgtgaagagctgcctggagcgc
accatctccgagtggatctcgctgatcgtggatcgcagcgtgaagattgcgtccaaaacg
accgaacagatcgtgcgcaaggatttcgcgctcgactcggacgagacgcggatgcgccgg
tcggcccacaatatggcgcgcagtctggtggcgggcatggcgatgatcacgtgccgcgac
cagatggtgcagacgattcagaacaacatcaaggtggcgttcgcggccgcggtcggtagc
gcgcagaaggaagcgatcattgagcacgccgcccagcagctggcgatggacaacattgag
ctggtgacggcgttcatccagaagacggccatcgagaaggtggcgatcgagatggacaag
atactggcggaggactttcagctgcgcaagctggcgcggcaggagggccggcgctactgg
gacgcggccgtactgtcgtaccatgcggaacggatgcccgagcgcatcaagctgaatgtg
ggcggcgtgtcgccgagccagctggccgtgtacgaggagttttcgcgcaacattcccggc
ttcctgccgattacggagcgcgatgcggcccagtttgcccccaagatggcggagatgctg
ccattcgttgctacgccggacgagatcggtgcgatctacgatgagctggcgagcaagatg
gatacgttcatcaaaacgacgcgtctcgtgccgatattgcagcttcacaccaacaacatg
gagcagctgctggagtgtttgattcacgcgcaccgttcgctcgacaatctgaccggctgc
acgctgctgaacaaggcggtcgagggcctgctggagggtttgatcaacatcccggaccag
atcgagcacgtcaagctgtaccgggacatccatctgcgcgtgatgcgcctgatgcaggac
catcgcctgttcggtccgatgtggacgaacaaagcgatcacgcgctacatgctggagtgc
cgggaggagctgcgctacaacgtggaagcggtcgatctgctgattacgtccaactttgtt
aacatgcagcagttcgacatgatgctggtgcagctgatggacaatgggaacaattacgtg
gcggtcgtgttcgcgatgcagctgctgcagacgttcttcatcgacgagcggcacaattcg
gccatcacggagaacgatctggccggcacgatcgagatgctgcaccggctgacggcgcac
ccgcgcgcaccggaaggtttgacgcatctgatcgagatgctgcgcgccaatcacgatccg
aactcgttcctgatggatcgtgccatcgttgggccgacctcgtacatccacgcgggtgta
gcccaggcacggtcggacattgacgattcacccggttttctcgagcgggccgagttcctg
ctcaaggactgggtcacgattgcactgtcgcccaacacgtgccgcgatccgctcaagggt
ttcagcgtgtttgtgggcaagatgaacgcgcacggcatactgaagggtgatgagccgctg
acgcgcttcttccgcttcgccacgcagtactgcatcgatctaacgtatcgcaacatgaac
gagccgaacgcgaaaacgaaaatcttccagtttatcgacgcgtacgttcggctgattgcg
ctgctggtaaagcactccggcgagagtggcagcaccaacacgaagctgaatctgctgaat
aagattctcggtatcatcatcggcatactgctgcacgatcaggaggtacacacgaccgcg
ttccagcaggtcggctaccatcgcatcttcgccatgctcttcctcgagctgaccacgcac
gatccgatcctggagaacatcagcatcagcgtgatcacggcgttctgccacacgttccac
atactgcgcccgtccgcggcgcccggcttctgctactcctggctcgagctgattgcgcac
cgcgtcttcatcgggcgcgtactcgcccagatcccgcagcagaagggctggcacatgtac
tcgcagctcctgatcgacctgttcaagtatctggccccgttcctgcgcaatgccgagcta
gccaagccggtgcagcatctgtacaagggtacgctgcgcgtgctgctggtgctgctgcac
gattttcccgagtttttgtgcgactaccatttcgcgttctgcgacgtcatcccgtcaaac
tgcatccagatgcgcaacctgatcctgtcgccgtacccgcgcaacatgcgcctgcccgat
ccgttcacgccgaacctgaaggtcgatatgctgaatgacattggaggatcgccacggatt
tccatcaactacgcgtcctccattcagccggtaagcttcaagaaggatctcgactcgtac
ctaaaggcccgcgcaccggtcaccttcctgtcggagttgcgctccaatctgcagatctcg
aacgaggtcggctcgcgctacaatattccgctgatgaacgcgctggtgctgtacgttggc
acccaagcaattgctcatattcgatcgaaaaatttgggcccaacaatgtccacgatcata
cacagcgcgcacatggatatcttccaaaacctggcggtcgatctggacacggagggacgc
tacctgttcctgaacgcgatcgccaaccagctgcgctatccgaacagccacacgcactac
ttcagctgctgcatactgtacctgttcgcagaggcaaattcggaagccattcaggaacaa
atcacgcgcgttttgctcgagcgcctgatcgtcaatcgtccgcatccgtggggtctgctg
atcacgttcatcgagctgatcaagaatccgatctacaagttctgggatcacgatttcgtg
cactgtgcgccagaaattgaacgacttttcgaatcggtggcaaagtcgtgcatggtcacg
agcaagagccagcagcaaattcaaaacgttgagccggatatcaccgagtgcagctaa
DBGET
integrated database retrieval system
