Anaeromyxobacter dehalogenans 2CP-1: A2cp1_2359
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Entry
A2cp1_2359 CDS
T00833
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acp
Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A2cp1_2359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acp03021
]
A2cp1_2359
03400 DNA repair and recombination proteins [BR:
acp03400
]
A2cp1_2359
Enzymes [BR:
acp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A2cp1_2359
Transcription machinery [BR:
acp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A2cp1_2359
DNA repair and recombination proteins [BR:
acp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A2cp1_2359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACL65697
UniProt:
B8JB70
LinkDB
All DBs
Position
complement(2615824..2620092)
Genome browser
AA seq
1422 aa
AA seq
DB search
MATTIQNNFRIRRNFGKINKIAEIPNLIAIQKFSYDKFLQADVPPEKRDDTGLQGVFKSV
FPIKDFNETSSLEFVSYHLEKPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTENGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDILYVRIDRRRKLPATVLLRALGATPDTAKKDPVEFHGSAEEI
LKYYYDTETIRIEGKGKYEKDLVPDLLKGQRATRDIRDPKSNEVIVKKNRKYTESAIKKL
VAAKMKSLPVEPEEVYTKISAEDVVDETTGEVLLEVNEEVTEAKVEELRKRNINEFKVLF
IDNLNILPALRDTLMQDKISTPEEAIMEIYRRLRPGDPPTPETATNLFVNLFFNAERYDL
SKVGRLKLNYKFGIEEPLENTVLTKRDILEVVRFLIDLKNGKPNKDVDDIDHLGNRRVRA
VGELLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFM
DQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHSTHYGRICPIETPEGPNIGLIASL
STYARVNEYGFVETPYRKVEKGRVTDEVTFYSALEEEKHIIAQANAPVDKKGNFTEAKVW
CRKEGEYIYVRPDEVDLMDVSPNQLVSVAASLVPFLENDDANRALMGSNMQRQAVPLLRT
QAPLVGTGIEAIVARDSGVTTVAKRDGVVQSVDASRIVVKADVPTSATDVANEVDIYNLI
KYQRSNQNTCINQKPIVKPGERVKKGDVIADGPATEMGELALGQNVVVAFMPWQGYNFED
SILLSERLIKEDVFTSVHIEEFECVARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIG
AEVKPGDILVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVSGTVINAKVF
SRKGVEKDERAKAIEEMEEAKLLKDQNDEIKIIQDSAFQKIRRLLLGKEVTARLVDDKGE
QLLKKGDVLDDALLDTVPQRYWGEIAVAGDVQDLARKIIENFEEQKELVKLLFGEKIGRL
KKGDELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRVLPEEDLPYLEDGTPVDI
VLNPLGVPSRMNVGQILETHLGWAARNVGLRLQEMIEKEWGADPLRKKLKAAFAGTEGGP
VGERLAALIEDVPEKELPKLVQKLRRGMHVATPVFDGAREDEMKALMEEGSATLQSILFD
GRTGEPFDQDVTVGVMYMLKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEME
VWAMEAYGAAYSLQEFLTVKSDDVVGRTRMYEAIVKGENTLESGLPESFNVLIKELQSLA
LDVELLETPEAQAAREAAERDLGGGPLGAPRGAVASGEKSSA
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacgattcagaacaacttccggatccggcggaacttcgggaagatcaacaag
atcgccgagatccccaacctcatcgccatccagaaattctcctacgacaagttcttgcag
gccgacgtcccgccggagaagcgggacgacaccggccttcagggtgtcttcaagtcggtc
ttccccatcaaggacttcaacgagaccagctcgctcgagttcgtgagctaccacctcgag
aagcccaagtacgacgtggacgagtgccaccagcgcgggatgacctactccgcgccgatc
aaggtggtcgtccgcctggtcgtctgggacaaggacgaggagaccggcgcccagtcgatc
cgcgacgtcaaggagcaggaggtctacttcggcgagatcccgctcatgacggagaacggg
accttcatcatcaacgggaccgagcgcgtcgtcgtcagccagctccaccgctccccgggc
gcgttcttcgaccacgacaagggcaagagccactcgtccggcaagctgctctacaacgcc
cggatcatcccgtaccgcggctcgtggatcgacttcgagttcgatcacaaggacatcctc
tacgtccgcatcgaccggcgccgcaagctgccggccacggtgctgctgcgcgcgctcggc
gcgacgccggacacggccaagaaggacccggtggagttccacgggtcggccgaggagatc
ctcaagtactactacgacaccgagacgatccggatcgaggggaagggcaagtacgagaag
gacctcgtgcccgacctgctcaagggccagcgcgccacgcgcgacatccgcgatcccaag
tcgaacgaggtgatcgtcaagaagaaccgcaagtacaccgagagcgcgatcaagaagctg
gtcgccgcgaagatgaagtcgctcccggtggagccggaggaggtctacacgaagatctcc
gccgaggacgtggtcgacgagaccaccggcgaggtgctcctcgaggtgaacgaggaggtc
accgaggccaaggtcgaggagctgcgcaagcgcaacatcaacgagttcaaggttctcttc
atcgacaacctgaacatcctgcccgcgctccgcgacacgctcatgcaggacaagatctcc
acgcccgaggaggcgatcatggagatctaccgccgcctccgccccggcgatccgccgacg
ccggagaccgcgacgaacctcttcgtgaacctgttcttcaacgccgagcgctacgacctg
tcgaaggtcggccgcctcaagctgaactacaagttcggcatcgaggagccgctcgagaac
acggtcctcaccaagcgcgacatcctcgaggtcgtccgcttcctcatcgacctcaagaac
ggcaagccgaacaaggacgtcgacgacatcgaccacctcggcaaccgccgcgtccgcgcg
gtgggcgagctgctcgagaaccagtaccgcatcggcctggtgcgcatggagcgggcgatc
aaggagcgcatgagcctccaggagatcgagacgctcatgccccacgacctgatcaacgcg
aagccggtgaccgcggtgatcaaggagttcttcgggtcgagccagctctcgcagttcatg
gaccagacgaacccgctctccgaggtcacgcacaagcggcgcctctcggccctcgggcct
ggcggcctgacccgcgagcgcgccggcttcgaggtgcgcgacgtccactccacgcactac
ggccgcatctgccccatcgagacgccggaaggcccgaacatcggcctgatcgcgtcgctg
tccacctacgcccgcgtcaacgagtacggcttcgtcgagacgccgtaccgcaaggtggag
aagggccgggtgaccgacgaggtgaccttctactccgcgctcgaggaggagaagcacatc
atcgcccaggcgaacgcgccggtggacaagaagggcaacttcaccgaggcgaaggtctgg
tgccgcaaggagggcgagtacatctacgtccgcccggacgaggtggacctgatggacgtg
agcccgaaccagctcgtgtccgtggccgcctccctggtgccgttcctcgagaacgacgac
gcgaaccgcgcgctgatgggctccaacatgcagcgccaggccgtgccgctgctccgcacg
caggcgccgctggtgggcaccgggatcgaggccatcgtggcccgcgactccggcgtgacc
accgtcgcgaagcgcgacggcgtggtccagtcggtggacgcctcgcgcatcgtggtgaag
gccgacgtgccgacctcggcgaccgacgtcgcgaacgaggtcgacatctacaacctcatc
aagtaccagcgctccaaccagaacacctgcatcaaccagaagcccatcgtgaagccgggc
gagcgggtgaagaagggcgacgtcatcgccgatggcccggccaccgagatgggcgagctc
gcgctcggccagaacgtggtggtcgcgttcatgccgtggcagggctacaacttcgaggac
tccatcctcctctccgagcgcctcatcaaggaggacgtgttcacgtcggtgcacatcgag
gagttcgagtgcgtcgcgcgcgacaccaagctcggcaaggaggagatcacccgggacatc
ccgaacgtcggcgaggaggccctcaaggacctcgacgagtccggcatcatccgcatcggc
gccgaggtgaagcccggtgacatcctggtcggcaagatcacgccgaagggcgagacccag
ctctcgccggaggagaagctcctccgcgccatcttcggcgagaaggccggcgacgtccgc
gacagctcgctgcgcgtgccgccgggcgtctcgggcacggtgatcaacgccaaggtcttc
agccgcaagggcgtcgagaaggacgagcgcgccaaggccatcgaggagatggaggaggcg
aagctcctcaaggaccagaacgacgagatcaagatcatccaggactcggcgttccagaag
atccgccgcctgctcctcggcaaggaggtcacggcccgcctggtcgacgacaagggcgag
cagctcctgaagaagggcgacgtcctcgacgacgcgctgctcgacaccgtcccgcagcgc
tactggggcgagatcgccgtcgccggcgacgtgcaggacctggcgcggaagatcatcgag
aacttcgaggagcagaaggagctcgtgaagctgctcttcggcgagaagatcggccgcctg
aagaagggcgacgagctgccgccgggcgtgatcaagatggtgaaggtgtacgtcgccatc
aagcgcaagctggccgtcggcgacaagatggccggccgccacggcaacaagggcgtggtc
tcgcgcgtgctgcccgaggaggacctgccgtacctcgaggacggcaccccggtcgacatc
gtgctcaacccgctcggcgtgccgtcgcgcatgaacgtcgggcagatcctcgagacgcac
ctgggctgggccgcgcgcaacgtcggcctccggctgcaggagatgatcgagaaggagtgg
ggcgccgacccgctgcggaagaagctgaaggcggcgttcgccgggaccgagggcggcccc
gtcggcgagcggctcgccgcgctcatcgaggacgtgccggagaaggagctgccgaagctc
gtgcagaagctccgccgcggcatgcacgtcgcgacgccggtgttcgacggcgcccgcgag
gacgagatgaaggccctcatggaggagggctccgcgacgctccagtccatcctgttcgac
ggccgcaccggcgagcccttcgaccaggacgtgacggtcggcgtcatgtacatgctgaag
ctccaccacctcgtggacgagaagatccacgcccggagcatcgggccgtactcgctcgtc
acgcagcagccgctgggcggcaaggcccagttcggcggccagcgcctgggcgagatggag
gtctgggcgatggaggcctacggcgcggcctactcgctccaggagttcctcacggtgaag
tccgacgacgtggtcggccgcacccgcatgtacgaggcgatcgtcaagggcgagaacacg
ctcgagtccgggctgcccgagtcgttcaacgtgctgatcaaggagctccagagcctcgcg
ctcgacgtggagctgctcgagacgccggaggcgcaggcggcgcgcgaggccgccgagcgc
gacctcggcggcggcccgctgggcgcgccgcgcggcgcggtcgcgtcgggagagaagagc
agcgcgtag
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integrated database retrieval system
