Anaeromyxobacter dehalogenans 2CP-1: A2cp1_3243
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Entry
A2cp1_3243 CDS
T00833
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acp
Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2cp1_3243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acp03019
]
A2cp1_3243
03009 Ribosome biogenesis [BR:
acp03009
]
A2cp1_3243
Enzymes [BR:
acp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A2cp1_3243
Messenger RNA biogenesis [BR:
acp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A2cp1_3243
Ribosome biogenesis [BR:
acp03009
]
Prokaryotic type
rRNA helicases
A2cp1_3243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACL66577
UniProt:
B8JGU0
LinkDB
All DBs
Position
3601486..3603183
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AA seq
565 aa
AA seq
DB search
MTFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLG
GSLLGDAPAFGPAGAPAGLVVAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREAR
ALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADEMLDMGFRDELEAILAAAPEG
RRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL
RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLV
ATDVAARGLDLPGLDLVLHADLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERM
LRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATDDERAAAARLLSGRDPVLVAA
ALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW
LLPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRET
RSPGEHRAHAGGERAPRARRPVTRT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttcaccgagctcggcgcccaccctgccctcgcccgcgcgctggagcgccgcggc
tacaccgagccgacgaccgtgcaggaggcggtgttcacgcccgcgctccgcggccgcgac
ctgctcgtctcgtccgcgaccggctcgggcaagacggtcgcctacggcctcgtgctgggc
ggctcgctgctcggcgacgcccccgcgttcggccccgccggcgcccccgccggcctggtg
gtcgcccccacccgcgagctcgccatgcaggtgcagcgcgagctggcctggctgctcgcc
gaggccgaggggcgggtcgtggcctgcgtgggcggcatggacgcgcggcgcgaggcgcgc
gcgctgtcggacggcgcccacctggtggtggggacgcccggccgcctgctcgaccaccac
cgccgcggcgcgctcgacctgtccgagctgcgcgcgctggtgctggacgaggcggacgag
atgctggacatgggcttccgcgacgagctggaggccatcctcgccgccgcgcccgagggg
cgccgcaccatcctcttctccgccacgctcccgaagcccatcgtcgagctggcccgccgc
tacaccagcgatccggcgcgcgtcgccgccacgcccgccggcgaggcgcacgcggacatc
acgtaccgcgcccacgtggtcgcgccgagcgagcgcgagctggcggtggtcaacgtgctg
cgcgcgctggagccgccgcgggcgctggtgttccgcgccacccgcgaggccgcccaccac
accgcctccagcctgtccgagcgcggcttcgcggccgtccccatctccggcgagctgacc
caggccgagcggaaccgcgcgctcgtcgccctgcgcgacggccgcgcgcgcgtgctggtc
gcgaccgacgtcgccgcgcgcgggctcgacctgcccggcctcgacctcgtgctccacgcc
gacctcccccgcgatccggcggcgctgcagcaccggagcggccgcaccggacgcgccggg
cgcaagggcctggccgtgctgctggcggcgccgcccgagcgctacaagctggagcggatg
ctccgggacgccggcgtgcgggtcgagtgggcccccgtccccgccgccgaggccatccgc
gcgtccgacgaggcgcgcctcgccggcgaggtggacgcgctgtcggaggacgcgaccgac
gacgagcgcgccgccgccgcccggctgctgtcgggccgcgatccggtgctcgtcgccgcc
gcgctggtccgctccacgcgcgcccggctgccctcgcccgaggaccttcccgagaccgtc
cacgccgcccgccaggccccctcgccccgcggcgagcgcgcgccgcggcgcggcccgccc
gccgaggtggcctggttccggatcaacctcgggcgcgagaagaaggccgatccgaagtgg
ctgctgccgctcctgtgccggcgaggcggcgtgacccgcgacgagatcggcaagatcgtg
atcggcgccaccgagacgcggttcgaggtggcccgcgccgccgcggcgcggttcggcgcg
acggcgcggcggccggatccgcgcgcgcccggcgtccgcatcgagccggtgcgcgagacg
cggtcccccggcgagcaccgcgcgcacgcgggcggcgagcgcgcgccgcgcgcgcgccgg
cccgtcactcggacctga
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