Aliarcobacter cryaerophilus: ACRYA_0442
Help
Entry
ACRYA_0442 CDS
T06825
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acre
Aliarcobacter cryaerophilus
Pathway
acre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACRYA_0442 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acre03021
]
ACRYA_0442 (rpoB)
03400 DNA repair and recombination proteins [BR:
acre03400
]
ACRYA_0442 (rpoB)
Enzymes [BR:
acre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACRYA_0442 (rpoB)
Transcription machinery [BR:
acre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACRYA_0442 (rpoB)
DNA repair and recombination proteins [BR:
acre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACRYA_0442 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AYJ79592
UniProt:
A0AAD0TS86
LinkDB
All DBs
Position
451434..455579
Genome browser
AA seq
1381 aa
AA seq
DB search
MLNSLKSGNRLRIDFAKNPQKIEIPNLLQLQQTSYDTFLMIDQKDRSGAGIEKVFKAIFP
IHDAQNRVTLDYLGSEVGKPRYDVRESMVRGLTYSIPLKINVRLTLWDLDEKTGEKIGVK
DIKEQSLFIREIPLMTERTSFIVNGVERVVVNQLHRSPGVIFKEDESNTTNNKLLYTGQI
IPDRGSWLYFEYDAKDVLYVRINKRRKVPITILFRALGYSKEDIVKLFYPVISIKIKNNK
FLTEFNPDDFMGRIDYDIKDDKGNLVIQAGKRLTARKAKALIEGGLKLIEYPLELLMDRH
TAGSIYDPQSGEVLFDALTSLDELKLKKLLDLGFETFDIANDLSSGADASIINAFKADAE
SLKLLKQTEQIEDENDLAAIRIYKVMRPGEPVTKEAAKEFIKKLFFDPERYDLTKVGRMK
MNHKLGVNVPEYVTTLTYEDVIKTVQYLIKVKAGHGHIDDRDHLGNRRIRAIGELLANEL
HAGLIKMQKTIRDKMTTLSGTLEDIMPHDLINSKMITSTITEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTYSKVN
ELGFIEAPYKKVVDGVVTNEISYYTATQEEGLVIAPGSTKLDENGKIIEPLVEVRLNGEI
ILMDKNKVDLIDISSQMVMGVAASLIPFLEHNDANRALMGSNMMRQAVPLIKPTAPIVGT
GLEKTVARDAWEAIKASRGGVVEKADSKNIYISGEDENGPFIDYYDVNKNVKTNNNTSFG
QRVAIKEGDIIEKGQVIADGPSMDKGELAVGINAMVAFMPWNGYNYEDAIILSERLIKKD
AFTSVHIYEKEIECRELKHGNEEITRDLPGVKEENLSHLDSSGIVKVGTYVTSGMILVGK
VTPKGEIKPTPEERLLRAIFGDKAGHVINKSLYCPTSMEGTVVDVKVFTKKGYEKCERAK
AEIELEKNELNQKHLDKLLMLDREEALKINNLLTKSKLDKELELDGTVYKKGDTLTVDTL
LSVNRFAMKKVVSSYSKEVEKAYNDTKEYFIRQKAELRKDHEEKLNVLEHDDILSSGVIK
QVKVYIATKRKIKVGDKMAGRHGNKGIVSNIVPKVDMPYLEDGTTVDIILNPLGVPSRMN
IGQIMEVHLGLVGRRLGKQIQQIYDAKKDEYIADLRAKMIEVAGVAKLMNAKSFIEKLSD
DELLDYARDWSKGVKFATQIFDGVEAYDFEKLFEMAKIDSDGKSILYDGKTGQKMKERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATAV
LKEMLTTKSDDVEGRTRAYRAIANGENVPPSGVPETFFVLTKELKALALDVEIFEEVENN
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactctttaaaatctggtaatagactaagaatagatttcgcaaaaaacccacaa
aaaattgaaattccaaatttattacaactgcaacaaacttcgtatgatactttcttgatg
attgatcaaaaagatagatctggtgctggtatagaaaaagtatttaaagcaatttttcca
attcatgatgctcaaaatagagtaactcttgattatttaggaagtgaagttggaaaacct
agatatgatgttagagaatcaatggttagaggattgacatattcaatccctcttaaaata
aatgtaagattaactctttgggatttagatgaaaaaactggagagaaaattggtgtaaaa
gatattaaagagcaatctttatttattagagaaattccacttatgacagaaagaacttca
tttattgtaaatggtgttgaaagagttgttgtaaaccaactacatagaagtccaggtgtt
atttttaaagaagacgaatcaaatactacaaacaataaacttctttacactggacaaatt
atcccagatagaggttcttggttatattttgagtatgatgcaaaagatgtattatatgta
agaattaataaaagaagaaaagttccaattactatactatttagagcattaggatactca
aaagaggatattgttaaactattttatcctgtaattagtattaaaattaaaaataataaa
tttttaacagagtttaatcctgatgactttatgggaagaattgactatgatataaaagat
gacaaaggaaatttagttattcaagctggaaagagattgactgctagaaaagctaaagct
ttaattgaaggtggattaaaactaattgaatatccacttgagcttttaatggatagacac
acagctggttctatttatgatccgcaatcaggagaagttttatttgatgctttaacaagt
cttgatgagttaaaacttaaaaaattattagatttaggattcgaaacatttgatattgca
aatgatttatcaagtggagcagatgcttcaattataaatgcatttaaagcagatgctgaa
agtttaaaattattaaaacaaactgaacaaattgaagatgaaaatgatttagctgcaatt
agaatttacaaagtaatgagaccaggtgagcctgtaacaaaagaggcagcaaaagagttt
attaaaaaactattctttgatcctgaaagatatgatttaacaaaagttggaagaatgaag
atgaatcataagttaggtgtaaatgtacctgagtatgttacaactttaacttatgaagat
gttattaaaactgttcaatacttaatcaaagttaaagcaggacatggtcatatagatgat
agagatcacttaggaaatagaagaattagagcaattggtgagttacttgcaaatgaatta
catgcaggtttaatcaaaatgcaaaaaactattagagataaaatgacaactctatcagga
actttagaagatatcatgcctcatgatttaatcaactcaaaaatgattacatcaacaatt
actgagttctttacaagtggacaattatcacaatttatggatcaaacaaatccattatca
gaagttactcataaaagaagattatcagctcttggagagggtggtcttgttaaagaaaga
gcgggatttgaagtaagggacgttcatccaactcactatggaagaatttgtccagttgag
actccagagggtcaaaatatcggtcttataaatactctttcaacttattcaaaagtaaat
gagctaggatttattgaagctccttataaaaaagtagttgatggtgttgttacaaatgaa
atttcatactacactgcaactcaagaagagggtcttgtaattgctcctggttcaacaaaa
cttgatgaaaatggaaaaattattgaaccacttgtagaagtaagattaaatggtgaaatc
attttaatggataaaaataaagttgatttaatagatatatcatctcaaatggtaatgggg
gttgcggcttctttaattccatttttagaacacaacgatgcaaatagagcattaatgggt
tcaaatatgatgagacaagctgttccattgattaaaccaacagctccaatagttggaact
ggtttagaaaaaacagttgcaagagatgcttgggaggctataaaagcttcaagaggcgga
gtagtagaaaaagcagattcaaaaaatatctatattagtggtgaagatgaaaatggacca
tttattgattattacgatgtaaataaaaatgtaaaaacaaacaataatacatcttttggg
caaagagttgcaattaaagagggtgatattattgaaaaaggtcaagtaattgcagatggt
ccatctatggataaaggtgaacttgcagttggaattaatgctatggttgcatttatgcca
tggaatggatacaactatgaggatgctattattttaagtgaaagacttattaaaaaagac
gcatttacatctgtacatatttatgaaaaagagattgagtgtagagagttaaaacatggt
aatgaagagataactagagatttaccaggtgttaaagaggaaaatttatcacatcttgat
agctctggaattgtaaaagttggaacttatgtaacttctggaatgattttagtaggaaaa
gtaactccaaaaggtgagattaaaccaactcctgaagagagacttttaagagcaattttt
ggtgataaagctggacatgttataaataaatctttatattgtccaacatcaatggaagga
acagttgttgatgttaaggttttcactaaaaaaggttatgagaagtgcgaaagagctaaa
gctgaaattgagctagaaaaaaatgaattaaatcaaaaacatcttgataaacttctaatg
ctagacagagaagaggctttaaaaataaataatcttctaacaaaatcaaaactagataaa
gagcttgagttagatggaactgtatataaaaaaggtgatacattaactgttgatactctt
ttaagtgtaaatagatttgctatgaaaaaagtagtatcttcttattcaaaagaggttgaa
aaagcttataatgatacaaaagagtactttattagacaaaaagctgaattaagaaaagat
catgaagagaaattgaatgttctagaacatgatgatattttatcaagtggtgttattaaa
caagttaaagtttatattgcaactaagagaaaaattaaagttggtgataaaatggctgga
cgacatggaaacaaaggtattgtttcaaatatcgttccaaaagttgatatgccatattta
gaagatggaacaactgttgatattattttaaatccacttggggttccttcaaggatgaat
attggtcaaattatggaagttcacttaggacttgtaggaagaagacttggaaaacaaatt
caacaaatctatgatgcaaaaaaagatgagtatattgctgatttaagagcaaaaatgatt
gaagttgctggagttgcaaaacttatgaatgctaaatcttttattgaaaaattaagtgat
gatgaacttcttgactatgctagagattggtcaaaaggtgttaaatttgcaacacaaatc
tttgatggtgttgaagcttatgactttgaaaaactgtttgaaatggcgaaaatagatagc
gatggaaaatctattttatacgatggaaaaacaggtcagaaaatgaaagaaagagtaaac
gttgggtatatgtatatgcttaaacttcaccacttagttgatgaaaaagttcatgctaga
agtacaggaccatactctttagtaactcaacaaccagttggtggaaaagctctatttggt
gggcaaagatttggagagatggaggtttgggcattagaagcttatggtgcaactgctgta
ctaaaagagatgcttacaactaaatcagatgatgttgaaggaagaacaagagcttataga
gcaattgcaaatggtgaaaatgttccgccttcaggagttcctgaaacattctttgtttta
acaaaagagttaaaagccttagctttagatgtagagatttttgaagaggtagaaaacaat
gagtaa
DBGET
integrated database retrieval system
