Crystallibacter crystallopoietes: AC20117_01670
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Entry
AC20117_01670 CDS
T05322
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acry
Crystallibacter crystallopoietes
Pathway
acry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AC20117_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acry03021
]
AC20117_01670
03400 DNA repair and recombination proteins [BR:
acry03400
]
AC20117_01670
Enzymes [BR:
acry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AC20117_01670
Transcription machinery [BR:
acry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AC20117_01670
DNA repair and recombination proteins [BR:
acry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AC20117_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AUI49717
UniProt:
A0A1H1EZF4
LinkDB
All DBs
Position
complement(354440..357958)
Genome browser
AA seq
1172 aa
AA seq
DB search
MVASSTSNTDTANSLLDASSNDGATRRISFAKIHEPLDVPNLLALQTHSFDWLVGNERWK
TRLQQALAEGQKGMATTSGLADIFEEISPIEDFQGTMSLSFSEPEFADPKYTMAECKDRD
ATYSAPLYVKAEFMNNNTGEIKQQTVFMGDFPLMTDKGTFVINGTERVVVSQLVRSPGAY
FERSADKTSDKDIFTAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTEG
QILETFGEYDSIRATLEKDTTETQEDALLDIYRKLRPGEPPTVEAAQSLLDNLYFNPKRY
DLAKVGRYKINRKLGIDKPLDDPDASVLNNDDIVAMIKFLVALHAGEKSIPGKRDGEDHE
IRVEVDDIDHFGNRRIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRP
VVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGR
MCPIETPEGPNIGLIGSLASYGRINAFGFIETPYRKVVDGLVTDQIDYLTADDEIEAVIA
QANAPLDEDNRFSEELVLCRERGGGGEPILTEPAEIDYMDVSPRQMVSVATALIPFLEHD
DANRALMGANMQRQAVPLLRSEAPLVGTGMERYAAVDAGDSVVAAKAGVVTEVSADMVTT
LNDDGTETHYPIMKFARSNQGNAYNQRVLVAEGQRVEVKSIIADGPSTDQGELALGKNLL
VAFMSWEGHNYEDAIILSQRIVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEV
LSQLDERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVP
HGESGTVIGVRIFERDNDDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILP
IEDMPFMEDGTPVDIVLNPLGVPGRMNVGQVLEIHLGWAAKQGWTIEGDPEWVKNLPNLP
REIGSTTVATPVFDGASEYEITGLLDSTNVTRDGERLIGSSGKARLFDGRSGEPFPDPIS
VGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYT
LQELLTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSTDGTT
IEMRDSDEEVFRAAEELGIDLSRAEPSSVEEV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcacctctaatactgataccgctaacagcctgcttgacgcttcatcg
aacgatggcgccacccgcaggatctcattcgctaagattcacgaacctctggacgttccc
aatcttctcgccctgcagacccacagcttcgattggctggtcggcaacgagcgctggaag
acccgccttcagcaggcgctggccgaaggccagaagggcatggccaccacgtcgggtctg
gcggacatcttcgaagagatctccccgatcgaggacttccagggcaccatgtccctgagc
ttctccgagccggagttcgctgacccgaagtacacgatggcggagtgcaaggaccgcgac
gccacctattccgctccgctgtacgtcaaggcggagttcatgaacaacaacacgggcgaa
atcaagcagcagaccgtgttcatgggcgacttcccgctgatgaccgacaagggcaccttc
gtcatcaacggcaccgagcgtgttgtcgtctcccagctggtccgttccccgggcgcctac
ttcgagcgttccgccgacaagaccagtgacaaggacatcttcaccgccaagatcatcccg
tcccgcggtgcctggttcgagctggagatcgacaagcgcgaccaggtcggcgtacgcctc
gaccgcaagcgcaagcagtccgtcaccgtcctgctgaaggcccttggctggaccgaaggc
cagatcctggagaccttcggcgagtacgactccatccgcgccaccctggagaaggacacc
accgagacccaggaagacgcactcctggacatctaccgcaagctccgtccgggcgagccg
cccacggtggaagctgcccagtccctgctggacaacctctacttcaacccgaagcgctac
gatctggccaaggttggccgctataagatcaaccgcaagctgggcatcgacaagccgctg
gatgatccggacgcatcggttctgaacaatgacgacattgtcgccatgatcaagttcctc
gtagccctgcacgccggcgagaagtccatcccgggtaagcgcgacggcgaggaccacgag
atccgcgtcgaggtcgacgacatcgaccacttcggcaaccgccgcatccgcgccgtcggt
gaactgatcgagaaccaggtccgcaccggtctttcccgtatggagcgtgtcgtccgcgag
cggatgaccacccaggacgtggaggccatcactccgcagaccctgatcaacatccgtccg
gttgtggcagccatcaaggagttcttcggaacctcccagctgtcccagttcatggaccag
aacaacccgctggccggcctgacgcacaagcggcgtctgtccgcgctgggcccgggcggt
ctgtcccgtgaccgtgcaggcatggaagtccgtgacgtccacccgtcgcactacggacgt
atgtgccccatcgaaacccctgaaggcccgaacatcggcctgatcggttcgctggcttcc
tacggccgcatcaacgccttcggcttcatcgagaccccgtaccgcaaggtcgtggacggc
ctggtcaccgaccagatcgactacctcaccgcggatgacgagatcgaggccgtaatcgcc
caggcgaacgcgccgctggatgaggacaaccgcttctccgaagagctggtcctctgccgc
gaacgcggtggcggtggcgagccgatcctgaccgagccggccgagatcgactacatggac
gtttccccgcgccagatggtgtccgtggcaaccgccctgatcccgttcctcgagcacgac
gacgccaaccgcgccctcatgggtgcgaacatgcagcgccaggctgtgccgctactgcgt
tcggaggctccgctggttggtaccggcatggagcgctacgccgctgttgacgccggcgac
tccgtggttgccgccaaggccggtgtggtcaccgaggtttcggccgacatggtcaccacc
ttgaatgacgacggcaccgaaacgcactacccgatcatgaagttcgcgcgctccaaccag
ggcaacgcctacaaccagcgcgtgctggttgccgaaggccagcgggttgaggtcaagagc
atcatcgccgacggtccctccacggaccagggcgaactggctctgggcaagaacctgctc
gttgcgttcatgtcctgggaaggccacaactacgaggatgcgatcatcctgagccagcgc
atcgtctccgacgacgtgctgacctccatccacatcgaggagcacgaggttgatgcccgc
gacaccaagcttggtgccgaggaaatcacccgcgacatccccaacgtgagcgaagaggtc
ctctcccagctggacgagcgcggcatcatccacatcggtgccgaggtcgaagcaggagac
atcctggttggccgtgtgaccccgaagggtgaaaccgagctgaccccggaagagcgcctg
ctgcgcgccatcttcggtgagaagtcgcgcgaagtccgcgacacctcgctgaaggttccg
cacggcgagtccggtacggtcatcggcgtgcgcatcttcgagcgcgacaacgacgacgaa
ctgcccccgggcgtgaaccagctcgtccgcgtctacgtggcacagaagcgtaagatcacc
gacggcgacaagctcgccggccgccacggtaacaagggcgtcatctccaagatcctgccg
atcgaggacatgccgttcatggaagacggcactccggtcgacatcgtcctgaacccgctg
ggtgttccgggccgtatgaacgtcggccaggtactggaaatccaccttggctgggccgcc
aagcagggctggaccatcgaaggggacccggaatgggtcaagaacctgccgaacctgccc
cgcgaaatcggttccaccaccgtggccaccccggtcttcgacggtgcttccgagtatgag
atcaccggtctgctggactcgaccaatgtgacccgcgacggcgaacgcctgatcggttcc
tccggcaaggcgcgtctgttcgacggccgctccggcgagccgttcccggacccgatctcc
gtgggctacatgtacatcctgaagctgcaccaccttgtcgatgacaagatccacgcacgc
tccaccggtccgtactccatgatcacccagcagccgcttggtggtaaggcccagttcggt
ggccagcgcttcggtgagatggaagtgtgggcgctggaagcctacggtgctgcgtacacc
ctgcaggaactgctgaccatcaagtccgatgacatccacggccgcgtcaaggtctacgaa
gccatcgtcaagggcgagaacatccctgaaccgggtgttccggagtccttcaaggtcttg
atcaaggaaatgcagtcgctgtgcctgaacgtggaagtcctttccaccgacggcaccacg
attgaaatgcgtgactcggatgaagaagtcttccgggccgcggaggaactgggtatcgat
ctgtcccgcgcagagcccagctccgtcgaagaggtctag
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