Anolis carolinensis (green anole): 100551800
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Entry
100551800 CDS
T01608
Symbol
scaf4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100551800 (scaf4)
03041 Spliceosome [BR:
acs03041
]
100551800 (scaf4)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100551800 (scaf4)
Spliceosome [BR:
acs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100551800 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
XMAP215_CLASP_TOG
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100551800
NCBI-ProteinID:
XP_008105815
Ensembl:
ENSACAG00000002569
UniProt:
G1KB24
LinkDB
All DBs
Position
3:145594233..145660485
Genome browser
AA seq
1140 aa
AA seq
DB search
MAPASASSASSSSPLPSLRGGARPGGLRYPRVQFAAWPPPSRRVGERDALYRSLTNETTP
PPPNGHVRAQALKRGRKRRPSRAFLLAFLPSPAAVVDPSPTDNMEAVNAFNQELFSLMEM
KPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQF
GTDKDVFGPRFCKNIIATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAG
ASSTASMTEDATNNEGSPPPTTAIPSELPQVSSNSVPAVPQLPSSDAFAAVAQLFQTTQG
QQLQQILQTFQQPPKPQSPVIDNNVMAQVHAITAQLQTTQPSEQKHDFSAPEQKTSFDKL
LDRFDYDDEPEAVEDPKKEESLSSSVSQPTFGFPSEGIQQPIYPQIPNIDQFQQRMLGIQ
QDAMLHQAPLPPNGQIPTYGLLPAPQFPPMAQTVIPPSSQVQQSFQPPFPVQSESHMQKT
HQQEMEMDHPPVQEVKRHDHRKSRSRSASRSPKRRRSRSSSRNRRSRHRRSRSRSRDRRR
HSPRTRSQERRERERERERRGKGLPPIKPETVSVCSTTLWLGQLDKRATQQDVGGLLEEF
GPIESINMIPPRGCAYIVMVQRQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQ
YWDVELGVTYVPWSKVKPEDLQSFCEGGMLDNETLSPEWKGIPKKPENQVAQNGGAGGGD
TAHNEQTLPVSKTVQMPVPIPTPMALPPPQVPQHQPGPPMVGTLQPPTFTPPLGIPPPGF
GPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPINPVSVPPVSVPPSAGVNIPNFTGSR
GGAEDEDGPEGYETAPPPTTSTSVPASVTQSTPLLGTPGTTPNPVIGLQTASTGLLGARP
GLIPLQRPPGMPPPHLQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPPGH
FARPGGPDDNNRDGRQFRNDRQPFTPNRDQERFGRRPFGNRIENERERFGNRNDDREHER
LGNRERRDWGRRSPERERHRDVEERNRRFSGQRDSRDRESRRDKDENRGKEKPELTDSVD
GVKNHESQSSKVEKTDTASELNKAESEPTGAKPAEELTSESTSSLEKSEKSTGSVVEGSR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgcctccgcctcttccgcctcttcctcctcccccctcccttctctgagggga
ggcgcgaggcccggaggtctgcgctatcccagggtgcagttcgcggcgtggcctccgccg
tcccgccgggtgggagagagagacgctctgtaccgctccctcaccaacgagacgacaccg
ccaccgccaaacggacatgttcgcgcccaggccttgaaacggggacggaagcgacgtcct
agccgcgctttccttctggccttccttccctcccccgccgccgttgtggacccctcgccg
accgacaacatggaggctgtgaacgccttcaaccaggagcttttctcactgatggagatg
aagcctcctatttcccgtgcaaagatgattctcatcactaaagctgccattaaagctatt
aagctttataagcatgttgtccagatcgttgagaagtttataaaaaaatgtaaaccagag
tataaagtccctggattatatgtaattgactcaattgttcgtcagtctcgccatcagttt
ggaacagacaaggatgtttttgggccaagattctgtaaaaatataattgccacattccag
tatttatatctttgtccatcagaagataagagtaagatagttcgtgtcctcaacctatgg
cagaaaaatggagtatttaaaatagaaattattcagcctcttctggacatggcagcagga
gctagcagtacagcttcaatgactgaagatgccactaataatgaaggttcaccacctcct
actacagcaattccatcagagcttccacaggtttcttctaattcagtacctgctgtgcca
caattgcccagttctgatgcttttgcagctgtagctcagttatttcaaactacacaagga
caacaactgcaacagattcttcagacttttcagcagccccctaaacctcagtctccagtg
atagataataatgtgatggctcaggtccacgctattactgctcagctgcagacaacacaa
ccgtcagaacaaaagcatgatttctcagccccagaacaaaagacatcctttgataagctg
ttggatcgatttgactatgatgatgagccagaagcagtggaagacccaaagaaagaagaa
tcattatcttcttcagtatctcaaccaacctttggatttccaagtgaaggcatacaacaa
ccaatttatcctcagatcccaaatatcgatcagttccagcagcgaatgttgggaatacag
caggatgcaatgctccaccaggccccacttcctccaaatggacaaataccaacctatgga
cttctgcctgcaccacaatttccacccatggctcagactgttataccaccttcgtcgcag
gtgcagcaatctttccagccgccttttccagtgcaaagtgagtcccacatgcagaaaaca
caccaacaggaaatggaaatggatcatcctcctgttcaagaggtaaagagacatgaccac
agaaagtcaagatctagatctgcatctaggtcacccaaaaggagaaggtcacgttctagt
tctcgaaatcgacgatcgcgccatcgtcgctctcgttctcgctctcgggataggcgtcgc
cattctcctaggacacggtcccaggaaaggcgggagagggagagggagagagagaggaga
gggaaaggtcttcccccaattaagccagaaaccgttagtgtttgcagtacaacactgtgg
ttaggtcagttggacaaacgagccacacagcaggatgtcggaggccttcttgaagagttt
ggtccaattgaatctataaatatgatacctccaagaggatgtgcttatattgtaatggtg
cagagacaggatgcaaaccgtgccctgcaaaaactaagccgtggaaattttaaagtgaat
cagaaatcaattaagattgcctgggctttgaataaaggaattaaaccagattataaacaa
tattgggatgtagaattaggtgttacttatgtaccatggagtaaagttaaacctgaagat
ttgcaaagtttttgtgaaggaggaatgctggacaacgaaacacttagtcctgaatggaaa
ggaattccaaaaaaaccagaaaaccaggtagcccaaaatggtggtgcaggaggtggagac
actgcacataatgaacaaacattgcctgtatctaaaactgttcaaatgcctgttccaata
cctacaccaatggcattgcctccaccacaggttccacaacatcagcctggccctccaatg
gttggtacgcttcagccacctacttttacccctccattaggaattccacctcctggattt
ggtcctggagttcctccaccaccacctccaccatttttgagacctggctttaatccaatg
catttaccaccagggtttctccctcctgggcctcctcctcctattaatcctgtttcagtt
cctcctgtctctgtccctccttctgcaggagtaaacatcccaaactttactggatctaga
ggaggtgctgaagatgaggatggccccgaaggatatgaaactgctccgccgcctacaacc
tcgactagcgtgccagcttctgtcacgcaatcaactccactccttggcaccccaggaacc
acgcctaatcctgtgattggacttcagacggcttccacaggccttttaggtgcacggcct
ggtttgatcccactccagcgacccccaggaatgccaccccctcacctgcagcgttttcca
atgatgccaccgcggcatatgcctccccacatgatgcacagaggcccacctccaggtccg
ggaggctttgggatgcccccacctcatgggatgaaaggccctttcccaccaccaggccac
tttgcaaggcctggtggacctgatgataataatagagatggaaggcagttcaggaatgat
aggcagccatttactccaaacagagaccaggaaagatttggaaggcgaccttttgggaat
cggatagaaaatgagcgtgaacgtttcggaaaccgcaatgacgacagagagcatgaacgc
cttggtaaccgtgaaaggagagattggggaagaagaagccccgaacgtgagagacaccga
gacgtggaggaaagaaatagacgtttcagcggacagagagattctagggatagggaatct
cgcagagacaaggacgaaaatcgagggaaagagaaacctgagttgacagacagcgtagat
ggtgtcaaaaaccatgaatcccagagtagtaaagtggaaaaaacagacactgcttcagaa
ctgaataaagcagagtctgaacccacaggggcaaaacctgcagaagagttaacatctgag
tctacctcatctcttgaaaaatctgaaaagtctactggctcagttgtagaaggttctcgc
tag
DBGET
integrated database retrieval system
