Anolis carolinensis (green anole): 100558915 Help Entry 100558915         CDS       T01608                                  Symbol col6a1 Name (RefSeq) collagen type VI alpha 1 chain   KO K06238   collagen type VI alpha Organism acs  Anolis carolinensis (green anole) Pathway acs04510   Focal adhesion acs04512   ECM-receptor interaction acs04518   Integrin signaling acs04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:acs00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100558915 (col6a1)    04518 Integrin signaling     100558915 (col6a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100558915 (col6a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100558915 (col6a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:acs04147]     100558915 (col6a1)    00536 Glycosaminoglycan binding proteins [BR:acs00536]     100558915 (col6a1) Exosome [BR:acs04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100558915 (col6a1) Glycosaminoglycan binding proteins [BR:acs00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100558915 (col6a1)  Hyaluronan   Extracellular matrix or blood plasma proteins    100558915 (col6a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 DUF1194 vWA-TerF-like Ku_N Motif Other DBs NCBI-GeneID:  100558915 NCBI-ProteinID:  XP_008112767 Ensembl:  ENSACAG00000004735 LinkDB All DBs Position 1:complement(123274555..123333371) Genome browser AA seq 1017 aa AA seqDB search MRLAYFFFTLLLQDCFLLRRVLAQGSDVSSNVVTFQDCPVDLFFVLDTSESVALREKPFG ALVDNIKQFTTQFIDKLNERYYRCDRNLMWNAGALHYSDEVQLISGLTSMRTGRSGLKDQ VSKVVSIGKGTYTDCAIKRGIEELLIGGSHHKENKYMIVVTDGHPLEGYKEPCGGLEDAA NEAKHQGIKVFSVAISPNHLESRLSVIATDQAYRRNFTATGPSLRARDIDNTIDTIIDMI TKNVEHECCSYECQPARGPPGPAGDPGYEGERGKPGLPGIKGDAGEPGNQGDPGPVGYQG MKGDKGDRGDKGSRGSKGSKGEKGKRGIDGIDGKKGEQGFHGLPGCKGSPGFDGLQGPPG SKGDPGPYGPKGGKGEPGVDGRPGRRGNTGNPGEKGPPGSPGAPGKKGEIGDEGNLGPDG TSGEKGSNGERGAPGTPGNRGTRGGKGDPGPQGEQGREGPYGPPGEPGEAGPPGPKGYRG DEGPSGPEGPKGLPGPPGLPGDTGPMGDRGEDGPPGNGTDGFPGVPGYPGSRGDPGVNGT KGHPGPKGDEGEIGDPGRESNATGTVGMKGAKGYRGPEGPPGPPGPVGPPGPDECEILDI IMKMCSCCECKCGPVDVLFVLDSSESIGLQNFMIAKDFIIKVIDRLLRDEHVTFTPGESH VGVVQYSHDKTQELVALGDANIDNIGALKEAVKNLRWIAGGTYTGEALQFTRDNLAQRFT SEKRVAIVITDGRSDILRDQTPLSALCGFNTQVVPLGIGDIFQGPPNPEQLSTISCGGVS IQRENFAELLDDTFLQSVVSEVCKDKKCPDYTCPISFSGPTDITLVVDSSTSVGSRNFNT TKKFVKRLAERFLSAAKPTEDAVRVSVVQYSGRTQQKLEVPFEQNYTVIADSVDKMQFIN DATDVNAALNYVTSLFRRSSRSGAKKRMLIFSDGNSQGITQSAIERAVQEARQAGIEIYV LVVGTQANEPNVRVLVTGKTAEYDVAFGERHLFRVPDYESLLRGVFYQTVSRKISVD NT seq 3054 nt NT seq  +upstreamnt  +downstreamnt atgaggttagcatactttttctttactttgctacttcaggactgttttctgttaagaagg gtgctcgctcaagggtcagatgtatccagcaacgtggtaacttttcaagattgccctgta gatctgtttttcgtcctggacacgtctgagagtgttgccttaagagaaaagccttttggg gcactggttgacaatatcaagcagttcaccacacaattcatcgataagctaaatgaaaga tattatcgttgtgaccggaatctcatgtggaatgctggagccttacattacagcgatgaa gtgcagctgatcagtgggcttacctccatgcgcactgggcggtctggcttgaaggaccaa gtatccaaagtagtctccatagggaaaggcacttacacagattgtgctatcaagagaggg attgaagagttgctcattggaggatcccatcacaaggaaaataaatacatgattgtggtg acagatggacatcccttggaaggttacaaagagccctgtgggggattggaagatgccgcc aatgaagcaaagcatcagggaatcaaagtgttctctgttgccatatccccaaaccatctg gaatccaggctaagtgtaattgccacagaccaagcctatcgccgcaatttcacagcaact ggaccaagtttacgcgcacgtgacattgacaacacaattgacacaatcattgacatgatt acaaagaacgtggagcatgagtgctgttcatatgaatgccagcctgctcgaggccctcca ggaccagctggggatccaggatatgagggtgaaagagggaagcctggcctacctggaata aaaggagatgctggagagcctggaaatcaaggagacccagggcctgttggttaccaagga atgaagggagacaaaggtgatcgaggtgacaagggctcaagaggttccaaaggaagcaag ggagaaaagggcaagcgtggcattgacggcattgatggcaagaagggagaacaaggattt catggattaccagggtgcaaaggatccccaggatttgatggcttacaaggaccacctgga tcaaaaggagaccctggtccttatgggcccaaaggaggaaagggagagcctggagttgat ggaagaccaggcaggcgtggaaatactggaaaccctggagaaaagggtcctcctgggtct cctggagctcctggaaagaaaggagaaattggagatgagggaaatcttggcccagatggc acctcaggagaaaagggcagcaatggagaaaggggggcaccaggtactcctggtaatcgt ggaacaagaggaggcaagggtgatccaggcccacagggtgagcaaggccgtgaaggacct tatggaccacctggagaaccaggtgaagcagggccacctggacctaaagggtacagagga gatgaaggaccttctgggccagagggccctaaaggactgcccgggccacctggattacct ggagacactggcccaatgggtgaccgaggagaagatggcccaccaggaaatggcacagat ggttttcctggagtcccaggctatcctggcagcagaggtgatcctggtgtgaatggtacc aaagggcatcctggtccaaaaggcgatgaaggagagattggagatcctgggagagaaagc aatgcaactgggaccgttggcatgaaaggagccaaaggatacagaggaccagaaggccct ccaggacctccaggacccgtaggccctcctggaccagatgaatgtgaaattttagacatc atcatgaaaatgtgttcttgctgtgaatgcaagtgtggtcctgttgatgttctgtttgta ctggacagttcagagagtattggcctgcagaacttcatgattgccaaggatttcattatt aaggtcatcgaccggttgctcagggatgaacatgtgacgttcactccaggggaatcccat gttggtgttgtgcagtacagccatgataaaactcaagagcttgtggccttgggagatgcc aatattgataacattggagcactcaaggaggctgtgaaaaacttgcgctggattgctgga ggcacctatactggggaggctcttcagttcaccagggacaatctggctcagcgctttact tctgaaaaaagagtggccatcgtcatcaccgatgggaggtctgacatccttcgggaccaa acaccattgagtgctctctgtggattcaatacccaggtggttcccctgggcattggggat attttccaaggtcctccaaaccctgagcagttatcaacaatttcctgtggtggtgtgtca attcaacgagaaaactttgctgagctcctggatgacactttcctacagagtgttgtctcc gaagtctgcaaagacaagaaatgcccagactacacatgtccaatctcttttagtgggcca acagacatcacactcgttgtggatagttctaccagtgtgggcagccggaatttcaatacc accaagaagtttgtgaaacgccttgcagaacgattcctttcagcagccaaacctactgaa gacgctgtgcgtgtctctgtcgtccaatacagtggaagaacccaacagaaactggaagtt ccatttgagcagaactacacagtgattgctgatagtgttgacaaaatgcaatttattaat gatgctacagatgtgaatgcagctttgaactatgtgaccagcctcttccgccgatcctct cgctctggtgctaaaaagaggatgctcattttctcagatggcaattctcaaggcatcacc cagagtgccattgagcgggcagttcaagaagcccggcaggcaggcattgaaatctatgta ctggtggtcggcactcaagccaatgagcccaatgtgcgtgtgcttgtcaccggaaaaact gctgagtatgacgtggcctttggtgagcggcaccttttccgggtgcctgactatgagtca ctgctacggggcgtattctaccaaactgtctccagaaaaatatctgtagactga

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