Actinoplanes sp. N902-109: L083_4416
Help
Entry
L083_4416 CDS
T02655
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L083_4416 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actn03019
]
L083_4416 (recQ2)
03400 DNA repair and recombination proteins [BR:
actn03400
]
L083_4416 (recQ2)
Enzymes [BR:
actn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L083_4416 (recQ2)
Messenger RNA biogenesis [BR:
actn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L083_4416 (recQ2)
DNA repair and recombination proteins [BR:
actn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L083_4416 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
AGL17926
LinkDB
All DBs
Position
5129816..5131645
Genome browser
AA seq
609 aa
AA seq
DB search
MTSAPAYDVLQRTFGYSAFRGEQEQIVEHVINGGDALVLMPTGGGKSLCYQIPALVRPGT
GVVISPLIALMQDQVDALRTLGVRAGFLNSTQDPDERRLTEQLFLAGELDLLYVAPEGLG
VPSTQRLLDRGRIALFAIDEAHCVAQWGHDFRPDYLNLSMLHERWPDVPRIALTATATSA
TREEIATRLDLAGARHFTASFDRPNIQYRIVPKQEPKRQLLDLLRTEHVGDAGIVYCLSR
ASVEKIADFLVQNGIPALPYHAGLDARVRAANQSRFLREDGLVMVATIAFGMGIDKPDVR
FVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQRKMIETSDGDLAHRRNLA
AHLDAMLALCETVQCRRAQLLAYFGQPGDNSCGNCDTCLTPPESWDGTVPAQKLLSTVLR
LQRERGQKFGAGQSIDILLGKTTEKVTQFRHDELSVFGIGAELREQEWRGVVRQLLAQGL
LAVEGEYGVLVLTDASAEVLRRERQVMMRREPERPARAPRARRATTGATAAATPDLDPAG
AQVFERLRSWRAAAAKEGGVPAYVIFHDATLKQIAALRPGSLAELSTVNGVGENKLAKYG
QQVLEALTS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccgccccggcctatgacgtcctgcagcgcaccttcggctactccgcgttccgc
ggcgagcaggagcagatcgtcgagcacgtgatcaacggcggcgacgcgctggtgctgatg
cccaccggcggtggcaagtcgctgtgctaccagatccccgccctggtccgcccgggcacc
ggcgtggtgatctcccccctgatcgcgctgatgcaggaccaggtcgacgcgctgcgcacg
ctgggtgtgcgggccgggttcctcaactcgacccaggaccccgacgagcgccggctcacc
gagcagctgttcctggccggcgagctcgacctgctgtacgtggcacccgagggcctgggc
gtgccgtccacccagcggctgctcgaccggggcaggatcgcgctgttcgccatcgacgag
gcgcactgcgtcgcccagtgggggcacgacttccgccccgactacctgaacctgtcgatg
ctgcacgagcggtggccggacgtgccgcgcatcgcgctcaccgcgaccgccaccagcgcc
acccgcgaggagatcgccacccgcctcgacctggccggcgcgcggcacttcaccgccagc
ttcgaccgccccaacatccagtaccggatcgtgcccaagcaggagcccaagcgccagctg
ctcgacctgctgcgcaccgagcacgtgggcgacgccggcatcgtctactgcctgtcgcgt
gcctcggtcgagaagatcgccgacttcctcgtgcagaacggcatccccgcgctgccctat
cacgccggtctcgacgcgcgcgtccgggcggccaaccagagtcgcttcctgcgcgaggac
gggctggtcatggtggccaccatcgcgttcggcatgggcatcgacaagcccgacgtgcgc
ttcgtcgcccacctcgacctgcccaagtccgtcgagggttactaccaggagaccggtcgc
gccgggcgcgacggccagccctcaaccgcctggctcgcgtacggactgcaggacgtggtg
cagcaacgcaagatgatcgagacctccgacggcgatctggcgcaccgccgcaacctggcc
gcccatctcgacgcgatgctggcgctctgcgagaccgtccagtgccggcgcgcccagctg
ctggcctatttcggtcagccgggcgacaactcctgcggcaactgcgacacctgcctgacc
ccgccggagtcgtgggacggcaccgtgccggcccagaagctgctctccaccgtgctgcgc
ctgcagcgtgaacgcggccagaagttcggtgccgggcagtccatcgacatcctgctcggc
aagaccaccgagaaggtcacccagttccgccacgacgagctgtcggtcttcggcatcggc
gccgagctgcgcgagcaggagtggcgcggggtggtccgccagctgctcgcccagggtctg
ctcgccgtcgagggcgagtacggcgtgctggtgctcaccgacgccagcgccgaggtgttg
cgccgcgagcgccaggtcatgatgcgccgcgagcccgaacgcccggcccgggccccgcgc
gcccgccgcgccacgaccggcgccaccgcagccgccacccccgacctcgacccggccggc
gcccaggtgttcgaacgcctgcgctcgtggcgcgccgccgcggccaaggagggcggcgtc
ccggcgtacgtcatcttccacgacgccaccctcaaacagatcgcggcgctgcgccccggt
tcgctcgccgagctgtccacggtcaacggcgtgggcgagaacaagctggccaaatacggt
cagcaggtgctggaggcgctcacctcctga
DBGET
integrated database retrieval system
