Actinomyces sp. oral taxon 897: C3V41_09425
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Entry
C3V41_09425 CDS
T05399
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acto
Actinomyces sp. oral taxon 897
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acto03032
]
C3V41_09425 (gyrB)
03400 DNA repair and recombination proteins [BR:
acto03400
]
C3V41_09425 (gyrB)
Enzymes [BR:
acto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C3V41_09425 (gyrB)
DNA replication proteins [BR:
acto03032
]
Prokaryotic type
DNA Topoisomerases
C3V41_09425 (gyrB)
DNA repair and recombination proteins [BR:
acto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V41_09425 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Pox_A30L_A26L
Motif
Other DBs
NCBI-ProteinID:
AVM62223
UniProt:
A0A2S0LPM9
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All DBs
Position
2361434..2363590
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AA seq
718 aa
AA seq
DB search
MVRPGPAAGTHLRARGPRARNAPQRPDAPDVRSNEHVAEDIAVTPDPTNGAADYGASDIT
VLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGFCDHIEVTLLADGGVRVS
DNGRGIPVDEHPTEHRPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVDT
LVRRQGYAWRMSFADGGRPVTELVRGEETSSTGTTQTFYPDPAIFETTVFDFETLRRRFQ
QMAFLNKGLRITLTDERPTAVDAGDEITGDEAGPADDPVPGHREVSYRYDHGLRDYVHFL
NTSKKVELIHPDIIDFEAEQQLDERRSISLEIAMQWTSAYSESVHTYANTINTTEGGSHE
EGFRTALTTLVNKYAREKGLLKDKDDNLTGDDIREGLTAVISVKLSEPQFEGQTKTKLGN
TEARTFVQQTVYAQLGDWLDSHPADAKAVIVKAGQAAAARLAARKAREATRRKGVLESAS
MPGKLRDCSSRDATRSEIFIVEGDSAGGSAVGGRDPEFQAIMPIRGKILNVEKARLDRAL
SSETIRNLITAFGTGIGEDFDLSRLRYHKIVIMADADVDGQHIATLLLTLLFRYMRPIIE
HGHAYIAMPPLYRLKWTGTDHEFAYSDAERDQLLEAGRAAGRRLPKDGGIQRYKGLGEMN
DHELWETTMDPARRILKKVTLDEAADADETFAVLMGDDVEQRRSFIQRNAADVRFLDI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcccaggacccgccgcaggtacccacctacgtgcgcgcggcccgagggccagg
aacgccccgcagcgtcctgacgcgcccgacgtgaggagcaacgaacacgtggctgaggac
attgctgtgacccctgaccccaccaacggggccgctgactacggtgccagcgacatcacc
gtcctcgaggggctggaggccgtccgcaagcggcccggcatgtacatcggctccaccggg
gagcgcgggctgcaccacctcgtctacgaggtcgtggacaactccgtggacgaggccctc
gcgggcttctgcgaccacatcgaggtcaccctcctggccgacggcggggtgcgcgtgagc
gacaacggccgcggcatcccggtggacgagcaccccacggagcacaggcccaccgtcgag
gtggtcatgaccatcctccacgccggcggcaagttcggcggcggcggctacgccgtctcc
ggcggcctgcacggtgtgggcatctccgtggtcaacgccctgtccacccgggtggacacc
ctggtgcgccgccagggctacgcctggcgcatgtcgttcgccgacggcggccgccccgtc
accgagctcgtcaggggcgaggagacctcgtccaccggcaccacccagaccttctacccc
gacccggctatcttcgagaccacggtgttcgacttcgagaccctgcgccgccggttccag
cagatggccttcctcaacaagggcctgcgcatcaccctgaccgacgagcgccccaccgcc
gtggacgccggtgacgagatcaccggtgacgaggccggccccgccgacgacccggtcccc
gggcaccgggaggtctcctaccgctacgaccacggcctgcgggactacgtgcacttcctc
aacacctccaagaaggtggagctcatccaccccgacattatcgacttcgaggccgagcag
cagctggacgagagacgctccatcagcctggagatcgccatgcagtggacgagcgcctac
tccgagtcggtgcacacctacgccaacaccattaacaccaccgagggcggcagccacgag
gaggggttccgcacggccctgaccaccctggtcaacaagtacgcccgggagaagggcctg
ctcaaggacaaggacgacaacctcaccggtgacgacatccgtgagggactgaccgcggtc
atatccgtcaagctctccgagccccagttcgaggggcagaccaagaccaagctcggcaac
accgaggcccgcacattcgtccagcagaccgtctacgcccagctcggcgactggctcgac
tcccacccggccgacgccaaggccgtcattgtcaaggccggtcaggccgccgccgcccgc
ctggcggcccgcaaggcgcgcgaggccacccgccgcaagggcgtcctggagtccgcctcc
atgcccggcaagctgcgtgactgctccagccgcgacgccacccgcagcgagatctttatc
gtggagggcgactccgccggcggctccgccgtgggcggtcgcgacccggagttccaggcc
attatgcctatccgcggcaagatcctgaacgtggagaaggcgcgcctggaccgcgccctg
tcgtccgagacgatccgcaacctcattaccgccttcggtaccggtatcggcgaggacttc
gacctctccaggctgcgctaccacaagatcgtcattatggccgacgccgacgtcgacggc
cagcacattgccaccctcctgctgaccctgctcttccgctacatgcgccccattatcgag
cacggccacgcctacatcgccatgcccccgctgtaccgcctcaagtggaccggcaccgac
cacgagttcgcctactccgacgccgagcgcgaccagctcctggaggcgggccgggcggcc
gggcggcgcctgcccaaggacggcggtatccagcgctacaaggggctgggggagatgaac
gaccacgagctgtgggagaccaccatggacccggcgcgccgcatcctcaagaaggtgacc
ctggacgaggccgctgacgctgacgagaccttcgccgtcctcatgggcgacgacgtcgag
cagcgccgctcctttatccagcgcaacgccgcagacgtccgcttcctcgatatctga
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