Actinoplanes sp. SE50: ACWT_8145
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Entry
ACWT_8145 CDS
T05392
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acts
Actinoplanes sp. SE50
Pathway
acts03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACWT_8145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acts03400
]
ACWT_8145
Enzymes [BR:
acts01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACWT_8145
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACWT_8145
DNA repair and recombination proteins [BR:
acts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACWT_8145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
Ribosomal_S13
zf-TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ATO87560
LinkDB
All DBs
Position
9117015..9117812
Genome browser
AA seq
265 aa
AA seq
DB search
MQRLEVASFSALKTYDPAPSALTGLPITSAGRHGKFLDIGIGLDVHLVVHLARAGWLHYR
DTFKSPAPLKPGSGPIAIRLRLDDGSGFDLTEAGTQKSLAAYLVRDPQTEVPGVSRLGPD
ALAVTRDEFARLIRSRNGQVKGVLTDQEVLAGIGNAYSDEILHVAKMSPFALTGKLTEEQ
LTTLYEAMREVETDAVQRSVGQKAAELKGEKRAGMRVHARTGLPCPVCGDTVREVSFADK
SLQYCATCQTGGKPLADRRLSKLVR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgcctcgaggtcgcctcgttcagcgcgctgaagacgtacgatccggcgccctcc
gccctgaccggcctgccgatcacctcggccggccggcacggcaagttcctggacatcggc
atcggcctggacgtgcacctggtcgtgcacctggcccgggccggctggctgcactaccgc
gacacgttcaagtcgccggccccgctcaaaccgggcagcgggccgatcgcgatccggctg
cggctcgacgacggctccggcttcgacctgaccgaggccggcacccagaagtcgctcgcg
gcctacctggtccgcgacccgcagaccgaggttccgggggtgtcccggctcggcccggac
gcgctcgcggtcacccgcgacgagttcgcccggctgatccggtcacgcaacggccaggtc
aagggcgtgctcaccgatcaggaggtgctcgccgggatcggtaatgcgtactccgacgag
atcctgcatgtggcgaagatgtcaccgttcgcgttgaccgggaagctcaccgaggagcag
ctcaccacgttgtacgaagcgatgcgcgaagtggagaccgacgccgtgcaacgatccgtc
ggacagaaggcggccgagctcaagggcgagaaacgggccggcatgcgggtgcacgcccgg
accggcctgccgtgcccggtttgcggcgacaccgtgcgcgaggtctcgttcgccgacaag
agcctgcagtactgcgcgacgtgccagaccggcggcaaaccgctcgccgaccgccgcctg
tccaagttggtgcggtga
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