Athene cunicularia (burrowing owl): 113484266
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Entry
113484266 CDS
T05777
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113484266 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113484266 (CNOT1)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113484266 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113484266 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
113484266
NCBI-ProteinID:
XP_026712325
LinkDB
All DBs
Position
11
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIHNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgccatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtgcaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaggtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cactcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagcgatggagcacaagcccatacctggaatgtagaggtc
ttaattgatgttcttaaagagctgaatcctagtctggacttcaaagtagtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgt
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttacgccat
gagctcatctccacactcatgccaattttccttggtaaccatcccaactctgctatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggaacagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcacggggagcccttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagcctccacctggagtcatgccgaaaggacgcccacccagtgct
agcagcttggatgccatctctcctgtacagatcgattcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaggcattcccccctctttccacccaa
aaccagacaacaggtttcagtgggatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagtctgactggcataggaactggagccctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catcccaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggattccaat
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccactcctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccggcccactggagtc
agcttcaagaaagacgtaccgccttccattaatactaccaacattgatacactgttagta
gccactgatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagagttgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagcctaactttcacagcttatattcaaatttccttgacacacttaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgattacactggctaaaaataaacccatcttgcatacggatttggatgtgaaatcacta
ctactggaagcgtacgttaagggacagcaggaattgctttatgtagtaccatttgttgct
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccgtggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccaccaatcacaacaacaactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttaccac
gacatcaacgtctattctttaggagggttggctccacatattaccttaaatccaacaatc
ccactgttccaagcccacccgcagttgaagcagtgtgtgcggcaggcgatagagcgagca
gtgcaagagctcgtccacccggtggtcgatcgatccattaagattgccatgactacttgt
gagcagatagtcaggaaggactttgcgctggattcagaggagtcacggatgcgtgtggct
gcacaccatatgatgcggaacctgactgctgggatggccatgattacctgcagggaacct
ttgctgatgagcatagctaccaacttgaaaaacagttttgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgctcagttagcacaggacaactgt
gagctagcatgctgctttatccagaaaacggctgtggaaaaggcaggccctgagatggac
aagaggctcgcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtgttaacttaccaggctgagcggatgccagaacagatcaggttgaag
gttggaggtgtggacccaaaacagctggctgtttatgaggagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
cagcaagcttgggctacagatgatgtagcacaaatctatgacaaatgcatgacagaactg
gagcagcacctgcagtccatcccacacaccctggccatgaatcctcaagctcaagcattg
cgcagcctcttggaggctgtggtagtggctcgtaactcccgggatgctattgctgcactt
ggactactgcagaaggctgtagagggcttactggatgccaccagtggggcagacgctgac
cttctgcttcgctatcgtgagtgtcatctgcttgtgctgaaggctctgcaggatggccgt
gcatatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagagat
gagtacaagtacaatgtggaagctgtggagctgctaatccacaatcaccttgttaacatg
cagcagtatgaccttcacttggctcagtcaatggagaatggcttgaactacatggctgtg
gcatttgccatgcagttggtgaagatcctgttggtggatgagagaagtgttgcccacata
acagaggcagatctctttcacacaattgaaaccctcatgaggattaatgctcattccaga
ggaaatgccccggaaggattaccccagctgatggaagtggtccgatcaaactatgaagca
atgattgaccgtgctcacggaggtccaaatttcatgatgcattcgggaatttcccaagcc
tctgagtatgatgatccaccaggtctgagggagaaggcagaatacctgctgagggagtgg
gtgaacctctaccattcagcggcagcaggccgtgacagtaccaaagcattctctgcgttt
gttggacaggtagagcttttggaaagaaagatgcaccagcaaggaattctgaaaacagat
gacctgatcacccgctttttccgtctttgcacggaaatgtgtgttgaaatcagctatcgt
gctcaggctgagcaacagcataatcctgctgccaaccccactatgattcgagccaaatgc
taccacaacctggatgcctttgtgcgacttattgctctgcttgtgaagcactctggggag
gcaaccaacacagttacaaagatcaacctcctgaataaggttctaggtattgtggtggga
gttcttctgcaagaccatgatgttcggcagagtgagtttcagcaacttccttaccatcgc
atttttatcatgttgctgttggaactaaatgctcctgagcatgtgctggagaccatcaac
ttccagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcccagttattgatcgatcttttc
aagtacttggctcctttccttagaaatgtggaactcaccaaacctatgcaaattctttac
aagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctctgtgac
taccattacgggttctgtgatgtgatcccacctaactgtattcagctaaggaatctgatc
ctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggta
gacatgttaagtgagattaacattgctccaagaatactcacaaatttcactggagtgatg
ccacctcagttcaagaaagacttggattcctatctcaaaacccgttctccggtcactttt
ttgtctgacttgcgcagcaacctacaagtatcaaatgaacctggcaaccgctacaacatc
cagctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacattcacaac
aaaggcagcacaccctctatgagcaccattacccactcagctcacatggacatcttccag
aatttggcagtagacctggacactgaaggccggtaccttttcttgaatgctattgccaat
cagctgcgatatcccaacagtcacacccactacttcagttgcaccatgttgtacctgttt
gcagaggccaacactgaggctatccaggagcagatcactagggtactcttggaacgactg
attgtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaat
ccagcatttaagttctggaaccatgagtttgttcactgtgctccagaaattgagaagttg
ttccagtcagttgcacagtgctgcatggggcagaagcaggcccagcaagtaatggaaggg
actggtgccagttag
DBGET
integrated database retrieval system
