Alicyclobacillus curvatus: JZ785_16710
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Entry
JZ785_16710 CDS
T08166
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acur
Alicyclobacillus curvatus
Pathway
acur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JZ785_16710 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acur03021
]
JZ785_16710 (rpoB)
03400 DNA repair and recombination proteins [BR:
acur03400
]
JZ785_16710 (rpoB)
Enzymes [BR:
acur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JZ785_16710 (rpoB)
Transcription machinery [BR:
acur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JZ785_16710 (rpoB)
DNA repair and recombination proteins [BR:
acur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JZ785_16710 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
HupE_UreJ_2
Motif
Other DBs
NCBI-ProteinID:
QSO50561
LinkDB
All DBs
Position
complement(3505094..3508624)
Genome browser
AA seq
1176 aa
AA seq
DB search
MQGHMVKYGWRERRSYSRIREVLDLPNLIEIQQRSYEWFLREGLREMFDDISPISDFTGN
LVLEFVDYSLGEAKYDVEESKERDVTYSAPLRVKVRLLNKETGEVKEQEVFMGDFPLMTD
TGTFIINGAERVIVSQLVRSPSVYFNSKIDKNGKKTFAATVIPNRGAWLEFETDAKDVVY
VRIDRTRKLPITVLLRALGLGTDAEIINLLGEDEYLRNTLDKDTTDSTERALVEIYERLR
PGEPPTVENARVLLASRFFDPKRYDLANVGRYKINKKLHIKNRLLNQRLAETLVDVDTGE
IIAEAGQEIDRRLLDKIIPALEGNVGRFSVRATSDLTETDEIPLQIVKIFSPIEDGKILH
VIGNATIDRSVKHIMPADILSAVSYFFGLLHGVGSTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDPSGITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARINEYGF
IETPYRRVNPDTGEVTEHIDYLTADEEENYIVAQANAKLTEDSRLANEEVVARYRGDTLL
VPRERIDYMDVSPKQVVSVATAMIPFLENDDANRALMGSNMQRQAVPLLVPKAPVVGTGM
EHQSAKDSGVCIVAKRPGVVERVTAREIWVRTYHEVDGNRVKGDLDKYKLLKFMRSNQNT
CINQRPVVREGQEVVAGDILCDGPATEMGELALGRNVLVAFMTWEGYNYEDAILLSEKIV
KEDVYTSLHIEEYELEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEIRTGDIL
VGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGAGIVVDVKVFTRENGDELP
AGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFMEDGTPVEIVLNPLGV
PSRMNIGQVLETHLGMAARALGIHVATPVFDGAHAEDVFSTLDEAGYDPDGKHVLYDGRS
GEQFDNRVTVGYVYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMDV
KILSEDEQEIVMRESDEDDDTGEKLNLNLESREIGD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
ttgcagggacacatggttaagtatgggtggcgtgagcgccgctcctactcgcgcatccga
gaagtcctggaccttccgaatctgattgagatccaacagcgctcgtatgagtggtttttg
cgcgagggtctgcgtgagatgtttgacgacatttcaccgatttcggattttacaggaaac
ctggtgctggagtttgttgactacagccttggtgaagcgaagtatgacgtggaagagtcc
aaggaacgggatgtgacctattctgcgccgttgcgcgtaaaggtacgcctgttgaacaag
gaaacaggagaggttaaggagcaggaagtgttcatgggtgattttccgctcatgacggac
accggaacctttattatcaatggtgctgaacgcgtcattgtcagccagttggtgcgctct
ccaagtgtgtatttcaatagcaagattgacaaaaacggtaaaaaaaccttcgctgcaact
gtcattccgaatcgcggcgcgtggctggaattcgagacggatgcgaaggacgtcgtttac
gtcaggattgaccgtacgcgaaaactccccattaccgtgttgctccgtgcactcggcctt
ggtaccgatgcagagattattaatctgcttggggaagatgagtacctgcgcaacaccctt
gacaaggataccaccgattcaacagaacgcgcgcttgtagaaatctatgaacggttgcgt
cctggcgagccgccgacagtagaaaacgcacgggtgttacttgcatcccgattcttcgat
cccaagcgatacgacttagccaatgtcggacgctacaagattaacaagaaactgcatatc
aagaatcgacttttgaatcagcggttagctgaaactctggtcgacgttgatactggggaa
atcattgcggaggcaggtcaagagattgaccgtcgcttactggacaaaattatcccggca
cttgagggtaacgttggtcggttttctgttcgtgcaacgtcggatttgacggagacggac
gaaattccgcttcagatcgtgaaaatcttcagtccgattgaggatggcaagattctgcat
gtgattggcaatgctacgattgaccgttcggtcaagcatattatgccagctgacattctg
tccgctgtgagctatttcttcggtttattgcacggtgtgggttcgacggatgacattgat
cacctcggcaatcgccggttgcgttccgtgggtgaactcctgcagaaccagttccgcatt
ggtctgtcccgtatggaacgcgtggtgcgtgaacgcatgtccattcaagacccaagcggc
atcacaccacaggcacttatcaacatccgccctgtgatagcttcgattaaggagtttttt
ggttctagtcagttgtcccaatttatggaccaaacaaatccgcttgcggagttaacgcat
aagcgccgtctctcggctcttggaccaggagggctgactcgcgaacgtgcaggcttcgag
gttcgcgacgttcactattcccactatggtcggatgtgtccgattgaaacccctgaaggt
ccaaacattggacttatcaactcgctgtcctcgtacgcgagaattaacgaatacgggttt
attgagacaccgtatcggcgtgttaacccggatactggtgaggttactgaacatatcgac
tacctcactgcggacgaagaggaaaactatatcgtcgcccaggcaaatgctaaattaacg
gaagacagccgcctcgcgaacgaagaggttgtggcgcgctatcgcggcgatacgttattg
gttccgcgcgagcgtatcgactacatggacgtctcgccgaaacaagtcgtctctgtcgca
acggccatgattccattcttggaaaacgatgacgccaaccgtgcgttgatgggttcgaac
atgcaacgccaagcagttccgctgttggtgccgaaagctccggtcgttggcactgggatg
gagcaccagtctgcgaaggattctggtgtgtgtatcgtcgcaaaacgccccggtgttgtg
gaacgtgtgacggctcgggagatttgggttcgtacctatcacgaggtcgatggcaatcgc
gtaaaaggtgacctcgacaaatataagctcttgaagtttatgcgttccaaccagaacaca
tgtatcaaccagcgtcctgtcgtacgtgaaggccaggaggttgtcgcgggagacatcttg
tgtgacggcccggcaacggagatgggcgaactagcgcttgggcgcaacgttctcgtcgcc
ttcatgacctgggaagggtacaactacgaagatgccattctgctctctgagaagattgtc
aaagaggacgtctacacctctttgcacattgaagagtatgagttggaggcgcgggatacg
aaacttggacccgaagaaatcacgcgggatatccccaatgtcggggaagacgcgctgcgt
aacctcgacgagcgcggcatcatccggattggcgccgaaattcgaaccggtgatatcttg
gttggtaaggtcactccgaagggtgtcaccgagttgaccgctgaggagcgcttgctgcac
gcaatctttggtgagaaggcgcgagaggttcgcgatacgtcccttcgagttcctcatggt
ggcgctggtatcgttgtcgacgtgaaggtgtttacgcgggaaaatggcgacgaactgcct
gctggtgtgaatcagttggttcgagtctacattgcccagaaacgcaagatatccgaaggt
gacaagatggctggtcgccacggtaacaaaggtgttgtggctcgcatcctaccagaagaa
gacatgccgttcatggaagatggcacgcctgttgagattgtgctcaatccactcggtgtt
ccatcccgtatgaacattggacaggtgctggaaacacacttgggtatggctgcaagagca
cttggcattcacgtcgcaaccccagtatttgacggtgctcacgccgaagacgtcttttca
acgcttgacgaagcaggctatgacccggatggcaagcatgtactttacgatgggcgtagt
ggggagcagtttgataaccgcgtcaccgttggttacgtctatatgttgaaattgcaccat
ttggtcgatgacaagattcacgcacgttcgaccggaccgtactccctcgtcacacagcag
ccacttggtggtaaggcgcagtttggcgggcaaaggtttggagagatggaagtgtgggca
ctcgaagcttatggtgccgcctataccctgcaagaaattttgacggtcaagtcggacgat
gttgttgggcgtgtcaaaacgtacgaagcgattgttaaaggcgagaatgtaccggaacca
ggcgtgcctgaatcgtttaaggttcttatcaaggagctgcaaagccttggcatggacgtc
aaaatcctgagcgaagatgagcaggagattgtcatgcgggagagcgacgaagacgacgat
accggggagaaattgaacctaaaccttgagagccgggaaatcggggactga
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