Acinetobacter sp. WCHAc010052: CDG61_16000
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Entry
CDG61_16000 CDS
T11375
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acwc Acinetobacter sp. WCHAc010052
Pathway
acwc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acwc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDG61_16000 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acwc03021
]
CDG61_16000 (rpoB)
03400 DNA repair and recombination proteins [BR:
acwc03400
]
CDG61_16000 (rpoB)
Enzymes [BR:
acwc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDG61_16000 (rpoB)
Transcription machinery [BR:
acwc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDG61_16000 (rpoB)
DNA repair and recombination proteins [BR:
acwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDG61_16000 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AXY61377
LinkDB
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Position
complement(3279319..3283407)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPSVMDAPYLLAIQVDSYRTFLQGGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYSNEQILEMFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIVDNDGKAIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AEDITLHNGDVIAANTVLSHEIMVKIAEGGIKQFNILFTNDIDRGPFIADSLRADTTSGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSTERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNSDITDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RKVVDGRVTEDVEYLSAIEEVGTVIAQADSGVDKDGNLTEEFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMEANVAHD
SGVCVIAKRGGRIEFVDASRVVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQKVLV
SLGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGIEKDERAQAIEKS
QLDSYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGTTRRGDKLTEDLLSGLELVDLLE
VQPVDEGIAERLTQIQVFLKEKSIEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDIHGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEKIDKMLQQQRTVIELREFLDKIYNKVGGEQEDLDSLTDDEILVLSGNLRKGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccgagc
gtcatggacgctccgtacttgctcgcgattcaagttgactcgtacagaacgttcttacaa
ggcggcaaaacaccaaaaaatcgcgaagatatcggtcttcaagctgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aagcctgagtttgacgttcgcgaatgtattcttcgtggctcaacttatgcagcaccaatg
cgcgtaaaaattcgtctgatcattaaagatcgcgaaaccaagtcgattaaagacgtacgc
gagcaggaagtgtacatgggtgaaatgccactcatgactgagaatggtacttttgtgatc
aacggtactgagcgtgtaatcgtatctcagttacaccgttcaccaggtgtgttcttcgat
catgacaaaggcaaaacgcattccagcggtaaagtgctttattcagcacgtatcattcct
taccgtggttcatggttagactttgagtttgatgccaaagatttggtatacgttcgtatt
gaccgtcgtcgtaaactgcttgcaactgttgttttacgtgcgctgggttacagcaacgaa
cagatcctggaaatgttctacgagaaagtacctgtttacctggatatgggcagctaccag
attgacctggtgcctgaacgtcttcgcggtgaaatggcgcagtttgatattgttgacaac
gatggtaaagcgatcgttgaacaaggtaaacgtattaatgcacgtcatgtacgtcagatg
gaagctgctggtttaactaagctttctgtacctgatgaatacctgtatgagcgtattaca
gctgaggatatcactttacataatggtgatgtgattgctgccaatactgtgcttagccat
gaaatcatggtgaaaatcgcagaaggcggaatcaagcagttcaatatcctgtttaccaat
gacattgaccgtggtccgttcattgcagactctttacgtgcagacacaacatctggtcgt
gaagaagcacttgtagaaatctacaaagtgatgcgtccaggtgagccaccgactaaagaa
gcagctgaaaatctgttcaataacttattcttctcaactgagcgttatgacttatcgcca
gtgggtcgtatgaagttcaaccgtcgcttgggtcgtccatacgaagtgggtacagatcag
aagtcacgtgaagttgaaggtattctgtctaattcagatatcacagacgtactgaagaca
ctggttgaaatccgtaacggtaaaggcgaagtcgatgatatcgatcacctgggtaaccgt
cgtgtgcgttcagttggtgaaatgacagaaaaccagttccgtgtaggtctggttcgtgtt
gaacgtgcggtaaaagagcgtttatcacaggctgaaacagataacctgtctccacaggat
ctgatcaatgcaaaacctgtagcagctgcaatcaaagaattctttggttcaagccagttg
tctcagttcatggatcagaataatccgctgtctgaaattacacacaaacgtcgtgtatca
gcgctcggtcctggtggtctgacacgtgaacgtgcaggctttgaagtgcgtgacgtacat
cagactcactacggtcgtgtatgtccgattgagactcctgaaggtccaaacattggtttg
attaactcactttcagtttatgcgaaatgtaataacttcggtttcctggaaactccatac
cgtaaagttgttgatggtcgtgtaactgaagatgttgaatatttatctgcgattgaagaa
gtgggtactgtgattgcacaggccgattctggcgtggataaagacggcaacttaacagaa
gaattcgtatcagtacgtcaccagggtgacttcgtacgtatgcctcctgaaaaagtaacg
catatggatgtatctgctcagcaggttgtatctgttgctgcgtcactgattccgttcctt
gaacacgatgatgccaaccgtgcattgatgggttcaaacatgcagcgtcaggctgttcct
acattgcttgcagacaaaccactggttggtactggtatggaagcaaacgtagcgcacgac
tctggtgtatgtgtgattgcgaaacgtggcggacgtatcgagtttgttgatgcttcccgt
gtggttatccgtgttaatgaagacgaaatgatcgctggtgaggcaggtgtggatatctac
aacctgattaaatacacccgttcgaaccagaacacctgtatcaaccagaaagtgcttgta
agcctgggtgataaagtaggtcgtggtgatgttcttgcagatggcccatcgactgacggt
ggtgaacttgcacttggtcagaacatgcgcgtcgcgttcatgacctggaacggttataac
tacgaagattcgatcttattatctgagcgtgtgcttcaggaagaccgtctgacttcgatt
catattcaggaactgtcatgtgtagcacgtgataccaagttaggtgcagaagaaattact
gccgatattcctaacgtgggtgaagctgcgctgtctaagctggatgaatcaggtattgtt
tacattggtgcagaagtaactgcgggtgacatccttgttggtaaggtaacacctaaaggc
gaaacgcaattaacaccggaagaaaaactgcttcgtgcaatcttcggtgaaaaagcagct
gatgttaaagactcgtctttacgcgttccatcaggtactaaaggtactgttattgatgtt
caggtgtttacacgtgacggcatcgaaaaagatgaacgtgctcaggcaattgaaaaatct
cagcttgattcttaccgtaaagatctgaaagaagaatataaaatcttcgaagaagctgct
cgtgaacgtattgttcgcttgttgaaaggtcaggaatccaacggtggtggtacaacacgt
cgtggtgacaaactgactgaagatctgttgtcaggtcttgagttggttgatctgcttgaa
gtacagcctgtagatgaaggtattgcagagcgtctgactcagatccaggtattcctgaaa
gaaaagagcattgaaattgatgagaagtttgccgagaaaaaacgcaaactttctacaggt
gatgaactgacaactggcgtactgaaagttgttaaagtttatttagctgttaaacgtcgt
attcagcctggtgataaaatggcgggtcgtcacgggaacaagggtgttgtatccaacatt
ctgcctgtagaagatatgccgcatgatatccatggtgtgcctgttgatatcgtgttgaac
ccactgggtgtaccatcacgtatgaacgtgggtcagattctcgaaactcacctgggtatg
gcagcaaaaggtctgggcgaaaaaattgacaagatgttgcagcagcagcgtactgttatt
gaattacgtgaattcctggacaagatctataacaaagttggtggcgagcaggaagacctg
gacagcctgactgatgatgagatcctggttctgtctggtaacctgcgtaaaggtgttcca
ttagcgactccggtatttgatggtgctgaagaaagtcagatcaaagatctgcttgaactt
gcagacatttcacgtacaggtcagaccgtactgtatgatggacgtacaggtgaacgtttc
gaccgtcctgtaactgtcggttatatgtacatgctgaaactgaaccacctggttgatgac
aagatgcatgcgcgttctacaggttcttattcacttgttacgcaacagccactgggtggt
aaagctcagtttggtggtcagcgtttcggtgagatggaagtctgggcacttgaagcatac
ggtgcagcttatacactgcaggaaatgctgactgtgaagtcggatgacgttgaaggtcgt
acccgcatctataagaacattgtagatggcaaccattatatggatccgggcatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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