Azotobacter chroococcum: Achr_35150
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Entry
Achr_35150 CDS
T03640
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Achr_35150 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acx03021
]
Achr_35150 (rpoB)
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_35150 (rpoB)
Enzymes [BR:
acx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Achr_35150 (rpoB)
Transcription machinery [BR:
acx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Achr_35150 (rpoB)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Achr_35150 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AJE22917
UniProt:
A0A0C4WVV1
LinkDB
All DBs
Position
complement(3905434..3909510)
Genome browser
AA seq
1358 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGASKDRLRDVGLHAAFKSV
FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDKESSNKAIKD
IKEQEVYMGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDAVFVRIDRRRKLPASVLLRALGYTTEEVLDIFYDTNVFHVTEQG
LSLELVPQRLRGEIAAFDIKDAAGKVIVEQGRRVTARHINQLEKAGIKELDVPLEYVTGR
TSAKAIVHPSTGEIIAECNTELTPELLVKIAKGQVVRIETLYTNDIDCGPFISDTLKIDS
TTNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFSAERYDLSAVGRMKFNRRIGREEIE
GAGVLSREDIVDVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVK
EGQVTDQIVFLSAIEEADHVIAQASATLDESGRLIDELVAVRHLNEFTVKAPEDVTLMDV
SPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRIVVRVNDDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGD
QVSRGDIMADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQE
LTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVMAGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALAIEKMQLDE
IRKDLNEEFRIVEGATFERLRAALVGAMCEGGAGLKKGTEISDEVLDGLEHGQWFKLRMA
DDALNEQLEKAQAYLSDRRQLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILETHLGLAAKG
LGEKINRMLEEQRKVAELRQFLAEVYNEIGGRKEEELDSLSDTEIVDLANNLRGGVPMAT
PVFDGAKESEIKAMLKLADLPESGQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMH
ARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKM
YKNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELETE
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgtatccgcaaggactttagcaagttgccggac
gtcatggatgtgccttatctcctggctatccagttggattcctatcgcgaattcctgcaa
gccggtgcgagcaaggacaggctccgcgacgttggtttgcatgcagccttcaagtccgtt
ttcccgatcatcagctattccggcaatgctgcactggaatacgttggctaccgtctgggc
gagccggccttcgacgtcaaggagtgcgtactgcgaggcgtgaccttcgccgtaccgctt
cgcgtgaaggtgcgcctgatcattttcgacaaggaatcttcgaacaaggcgatcaaggac
atcaaggagcaggaagtctacatgggggaaatccccctgatgaccgagaacggcaccttt
atcgtcaacggtaccgagcgcgtgatcgtttctcagctgcaccgttccccgggtgtgttc
tttgatcacgaccgcggcaagacccacagctccggcaagctgctgtattccgcacggatc
attccctaccgcggctcttggctcgacttcgagttcgatccgaaggatgcagtgttcgtc
cgtatcgaccgtcgccgcaagctgccggcctcggtgttgctgcgtgcgctgggatacacc
accgaagaagtgctggacatcttctacgacaccaatgtgttccatgtgacggagcagggc
ctcagcttggagctggtgccgcagcgtttgcgtggcgaaattgccgcgttcgacatcaag
gacgctgccggcaaggtcatcgtcgagcaggggcgacgcgtcaccgctcgtcacatcaat
cagctggaaaaagccggcatcaaggaactggatgttccgctggaatatgtcaccggccgc
acctcggccaaggccatcgtgcacccgtccaccggcgagatcatcgccgagtgcaacacc
gagctgacccccgagctgctggtgaagatcgccaagggccaggtcgtgcgcatcgagact
ctctacaccaacgacatcgattgcggcccgttcatttccgataccctgaagatcgactcg
accaccaatcagctggaagcattggtcgagatctaccgcatgatgcgcccgggcgagccg
ccgaccaaggatgccgccgagaccctgttcaacaacctgttcttcagcgccgagcgttac
gatctgtccgcggtggggcgcatgaagttcaaccgccgcatcggtcgcgaagagatcgag
ggggctggtgtgctgagccgcgaggatatcgtcgacgtgctcaagaccctggtcgacatc
cgcaacggcaagggcatcgtcgatgacatcgaccacctgggcaaccgtcgcgtgcgctgt
gtcggcgaaatggccgagaaccagttccgggtcggcttggtccgcgtcgagcgcgcggtc
aaggagcgcctgtcgatggccgaaagcgaaggcctgatgccgcaggatctgatcaacgcc
aagccggtggcggccgcggtcaaggagttcttcggctccagccagctgtcgcagttcatg
gaccagaacaacccgctgtcggaaatcacccacaagcgccgcgtttccgccctcggcccg
ggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtacacccgacccattat
ggccgcgtgtgcccgatcgaaacgcctgaaggtccgaacatcggcctgatcaactccctg
gctgcctatgcccgcaccaaccagtacggtttcctggagagcccgtaccgtgtggtcaag
gaggggcaggtcaccgaccagatcgtgttcctgtccgccatcgaggaagccgaccatgtg
attgcccaggcgtcggcgacgctggacgagagtggtcggctgatcgacgagctggtagct
gtccgccatctgaatgaattcaccgtcaaggcgccggaagacgtcacgctgatggatgtc
tcgccgcgtcaggtggtgtccgtcgccgcttcgctgattcccttcctcgagcacgacgac
gccaaccgtgcgctcatgggctccaacatgcagcgtcaggccgtgccgaccctgcgtgcc
gacaagccgctggtgggtaccgggatggagcgcaacgtggcgcgcgactccggcgtctgc
gtggtagcccgccgtggcggggtgatcgactcggtcgacgccagtcgcatcgtggtgcgc
gtcaatgacgacgaggtcgaaaccggcgaagccggtgtggatatctacaacctgaccaag
tacacccgttccaaccagaacacctgcatcaaccagcgtccgctggttagcaagggtgac
caggtctcgcgcggcgacatcatggccgatggtccgtccaccgacatgggcgagctggcc
ctggggcagaacatgcgcgtggcgttcatgccctggaacggcttcaacttcgaggactcc
atctgcctgtccgagcgcgtggtccaggaggaccgcttcaccaccatccacatccaggaa
ctgacctgtgtggcgcgcgataccaagctcggcccggaggagatcaccgcggatatcccg
aacgtcggtgaggctgcgctgaacaagctggacgaggccggtatcgtctacgtcggtgcc
gaggtcatggctggcgacatcctggtcggcaaggtcaccccgaagggcgagacccagctg
actccggaagagaagctgctgcgggcgatcttcggcgagaaggccagcgacgtgaaggac
acatccctgcgcgtgccgaccggcaccaagggcaccgtgatcgacgtccaggtgttcact
cgtgacggcgtcgagcgcgactcccgcgccctggccatcgagaaaatgcagctggacgag
atccgcaaggatctcaacgaggagttccgcatcgtcgagggggcaaccttcgagcgtctg
cgggccgctctggtcggcgccatgtgcgaaggcggggccggcctgaagaagggcaccgag
atcagcgacgaggtcctcgacggactcgagcatggccagtggttcaagctgcgcatggcc
gacgacgcgctcaacgagcagctggagaaggcccaggcctacctgtccgatcgtcgccag
ctgctcgacgacaagttcgaggacaagaagcgcaagctgcaacagggcgacgatctggca
ccgggtgtgctgaagatcgtcaaggtctacctggccatcaaacgccgcatccagccgggt
gacaagatggccggccgtcacggcaacaagggtgtggtgtcggtgatcatgccggtcgag
gacatgccccacgatgccaacggcactcccgtggacatcgtcctcaacccgctgggcgtg
ccgtcgcggatgaacgtcgggcagatcctcgaaacccacctggggctggcagccaagggc
ctgggcgagaagatcaaccggatgcttgaggagcagcgcaaggtcgccgagctgcgtcag
ttccttgccgaggtgtacaacgagatcggcgggcgcaaggaggaagagctggattctctg
agcgataccgagatcgtcgacctggcaaacaacctgcgcggcggcgtgccgatggctacg
ccggtgttcgatggcgccaaggaaagcgaaatcaaggccatgctgaagctggccgatctg
ccggaaagcggtcagatgcgcctgttcgatgggcggaccggcaaccagttcgagcgcccg
accaccgtcggttacatgtacatgctcaagctgaaccacctggtcgacgacaagatgcac
gcgcgctccaccggttcctacagcctggtgacccagcagccgctgggcggcaaggcgcag
ttcggcggtcagcgtttcggggagatggaggtctgggcgctggaagcctatggcgccgcc
tacaccctgcaggaaatgctcaccgtgaaatcggatgacgtgaatggccggaccaagatg
tacaagaacatcgtggacggcgatcaccgcatggaggccggcatgcccgagtccttcaac
gtgctgatcaaggaaatccgctcgctcggcatcgacatcgaactggaaaccgaataa
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integrated database retrieval system
