Anser cygnoides (swan goose): 106029326
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Entry
106029326 CDS
T04896
Symbol
SMC1A
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04110
Cell cycle
acyg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106029326 (SMC1A)
04114 Oocyte meiosis
106029326 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acyg03036
]
106029326 (SMC1A)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106029326 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
106029326 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_29
AAA_21
TPR_MLP1_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106029326
NCBI-ProteinID:
XP_066840935
LinkDB
All DBs
Position
29:complement(2412460..2432747)
Genome browser
AA seq
1232 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAASRAFVSMVYSEEGAEDRTFARVIVGSSSEYKINNRVVQLSEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEAEIEKLNK
ELGLKNREIDKDKKRMDRVEDELKDRKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKRLEGELTEEVELAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMDSIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKAKLVIDVIRYE
PPHXKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIXGGASDLKA
KARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQ
TKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKDLKEKMNQVEDEVFEEFC
REIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFERNQLREDQEKVLMWEQG
VRKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMDEIRKKLGGA
NKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGAAGEE
PVSSSQRTSSLYAREALIEIDYSDLPEELKDAQAEEEIRQEMNQLQQRLTEQQSVLQRIA
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQMKKERFDRFNACFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPHGQPLGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSAANFQAIVISLKEEFYTKAQSLI
GVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctcaagctcatcgagatcgagaacttcaaatcctacaagggccgccagatc
atcgggcccttccggcgcttcaccgccatcatcggccccaacggctccggcaaatccaac
ctgatggacgccatcagcttcgtgctgggcgagaagacctcgaacctgcgggtgaagacc
ctgcgggacctcatccacggcgcgcccgtgggcaagccggccgccagccgcgccttcgtc
agcatggtgtactccgaggagggcgccgaggaccgcaccttcgcccgggtcatcgtcggg
agctcgtcggagtacaagatcaacaaccgcgtggtgcagctgagcgagtacagcgaggag
ctggagaagctggggatcctcatcaaggccaggaacttcctcgtcttccagggcgcggtg
gagtcgatcgccatgaagaaccccaaggagcgcacggcgctcttcgaggagatcagccgc
tcgggggagctggcgcaggagtacgacaagcgcaagaaggagatggtgaaggcggaggag
gacacgcagttcaactaccaccgcaagaagaacatcgccgccgagcgcaaggaggccaag
caggagaaggaggaggcggaccggtaccagcggctgaaggacgaggtggtgcgggcgcag
gtgcagctgcagctcttcaagctgtaccacaacgaggcggagatcgagaagctcaacaag
gagctggggctgaagaaccgcgagatcgacaaggacaagaagcgcatggaccgcgtggag
gacgagctcaaggaccgcaagaaggagctgggcaagatgatgcgggagcagcagcagatc
gagaaggagatcaaggagaaggactcggagctgaaccagaagcggccgcagtacatcaag
gcgaaggagaacacctcgcacaagatcaagaagctggaggcggccaagaagtcgctgcag
aacgcccagaagcagtacaagaagcgcaagggcgacatggacgagctggagaaggagatg
ctctcggtggagaaagcccggcaggagttcgaggagcgcatggaggaggagagccagagc
cagggccgcgacctgacgctggaggagaaccaggtgaagaagtaccaccggctgaaggag
gaggccagcaagcgagccgccacgctggcccaggagctggagaaattcaaccgggaccaa
aaagccgaccaggatcggctggatttggaggagaggaagaaggtggagaccgaggccaag
atcaagcagaagctgcgggagatcgaggagaaccagaagcgcatcgagaagctggaggag
tacatcgccaccagcaagcagtccctggaggagcagaagcggctggagggcgagctgacg
gaggaggtggagctggccaagcgccgcatcgacgagatcaacaaggagctcaaccaggtg
atggagcagctcggggacgcccgcatcgaccgccaggagagcagccggcagcagcgcaag
gccgagatcatggacagcatcaagcgcctctaccccggctccgtgtacggccgcctcatc
gacctgtgccagccgacgcagaagaagtaccagatcgccgtcaccaaggtgctgggcaag
aacatggacgccatcatcgtggactcggagaagacggggcgcgactgcatccagtacatc
aaggagcagcggggggagcccgagaccttcctgcccctcgattacctggaggtgaagccg
acggacgagaagctgcgggagctgaaggcgaagctggtgatcgacgtgatccgctacgag
cccccacatnncaaaaaagccctgcagtacgcctgcggcaacgcgctggtctgcgacaac
gtggaggacgcccggcgcatcgccttcgggggacaccagcgccacaagacggtggcgttg
gacgggaccctcttccaaaaatcgggggtgatcntcgggggcgccagcgacctgaaggcc
aaagcccggcggtgggacgagaaggcggtggacaagctgaaggagaagaaggagaggctg
acggaggagctgaaggagcagatgaaggcgaagaggaaggaggccgagctgcggcaggtc
caatcccaagcccacggcctccagatgaggctcaagtactcgcagagtgacctggagcag
accaagacgcgccacctcgccctcaacctccaggagaagtcaaaactggagagcgaattg
gccaattttgggccgcgcatcaacgacatcaagaggatcatccagggccgggagcgggag
atgaaggacctgaaggagaagatgaaccaggtggaggacgaggtgtttgaggagttctgc
cgcgaaatcggggtgaggaacatccgcgagttcgaggaggagaaggtcaagaggcagaac
gagatcgccaagaagaggctggaattcgagaaccagaagacgcgcctgggcatccagctg
gacttcgagcgcaaccagctgcgggaggaccaggagaaggtgctgatgtgggagcaaggc
gtgcgcaaggacgaggccgagatcgagaagctgaagaaggaggagcagcggcacatgaag
atcatcgacgagacgatggcgcagctgcaggacctcaagaaccagcacttggccaagaag
tccgaggtcaacgacaagaaccacgagatggacgagatccgcaagaagctgggcggggcc
aacaaggagatgacgcacctgcagaaggaggtgacggccatcgagacgaagctggagcag
aagcgcagcgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaagctgccc
ctctccaagggcaccatggacgacatcagccaggaggagggcggcgcggccggggaggag
ccggtgagcagctcgcagcgcacctccagcctctacgcccgcgaggccctgatcgagatc
gactacagcgacctgcccgaggagctcaaggacgcgcaggcggaggaggagatccgccag
gagatgaaccagctgcagcagcggctgacggagcagcagagcgtcctgcagcgcatcgcc
gcccccaacatgaaggccatggagaagctggagagcgtccgcgacaagttccaggagacc
tccgacgagttcgaggcggcgcgcaagcgggccaagaaggcgaagcaggccttcgagcag
atgaagaaggagcgcttcgaccgcttcaacgcctgcttcgagtccgtcgccaccaacatc
gacgagatctacaaggccctgtcccgcaacagcagcgcccaggctttcctgggccccgag
aaccccgaggagccctacctggacggcatcaactacaactgcgtggccccgggcaagcgc
ttccgcccccatggacaacctctcgggggcgagaagacggtggccgccctcgccctcctc
ttcgccatccacagctataagccggccccgtttttcgtgctggacgagatcgacgccgcg
ctggacaacaccaacatcgggaaggtggccaactacatcaaggagcagtcggccgccaac
ttccaggccatcgtcatctccctcaaggaggaattttacaccaaggcccagagcctcatc
ggcgtctaccccgagcaaggcgactgcgtcatcagcaaggtgctgaccttcgacctcacc
aagtaccccgacgccaaccccaaccctaacgagcagtga
DBGET
integrated database retrieval system
