KEGG   Anser cygnoides (swan goose): 106032160
Entry
106032160         CDS       T04896                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03030  DNA replication
acyg03410  Base excision repair
acyg03420  Nucleotide excision repair
acyg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106032160 (RFC4)
   03410 Base excision repair
    106032160 (RFC4)
   03420 Nucleotide excision repair
    106032160 (RFC4)
   03430 Mismatch repair
    106032160 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acyg03032]
    106032160 (RFC4)
   03036 Chromosome and associated proteins [BR:acyg03036]
    106032160 (RFC4)
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106032160 (RFC4)
DNA replication proteins [BR:acyg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106032160 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    106032160 (RFC4)
Chromosome and associated proteins [BR:acyg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106032160 (RFC4)
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106032160 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    106032160 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_assoc_2 AAA_lid_RFC1 Rad17 AAA_16 AAA_30 AAA_22 AAA_11 SLFN-g3_helicase DUF815 Mg_chelatase AAA_28 AAA_14 AAA_24 RuvB_N AAA_19 TIP49_C AAA_5 DNA_pol3_gamma3 DNAX_ATPase_lid AAA_7 ResIII
Other DBs
NCBI-GeneID: 106032160
NCBI-ProteinID: XP_013030455
LinkDB
Position
9:complement(18048983..18060830)
AA seq 362 aa
MQAFLKGPSAISTKPPAARERGAAGSGGEGKKPRPVPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKACPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKENVKISSEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITENIVTEIAGVIPKETMDGLLSACQSGSFERLETVAKNLINEGYA
VGQLVNQLHDIVVESDDFSDKQKSIIVEKLAEVDKCLADGADEYLQLMSLCALVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctgaagggcccctccgccatcagcaccaagcccccggccgccagggag
aggggcgcggcggggagcggcggcgagggcaagaagccccggcccgtgccctgggtggag
aaatatcgccccaagaacgtggatgaagtcgccttccaggatgaagtcgtcgctgtgctg
aaaaagtccttggaaggcgccgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgctagagaactctatggtcctgaattattccga
caaagagtccttgagttaaatgcctccgatgagcgtggaatacaagtgatccgggaaaaa
gtgaaggcttttgctcagctaacagcatctggaagtcgttcagatggtaaagcttgtcct
ccttttaagattgtaatcctggatgaagcagactctatgacttcagcagcccaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgccttatttgtaactac
atcagcagaataattgaacctttaacgtctcgatgctccaaattccgcttcaaacctttg
tcagacaaaatccagcagcagcggctattggatgtttctgagaaggaaaatgtgaaaatc
agtagtgaggcagtctcttaccttgttaaagtgtcagaaggggacttaagaaaagccatc
acttttcttcaaagtgccactcgcttaatgggagggaaggagatcacagagaacatagtc
acggaaattgctggggtcatccctaaagaaacaatggatggactgctctctgcctgccag
agtggttcatttgagagactggaaacagtggcaaagaatctcataaatgaagggtatgct
gtcggtcagcttgtaaaccagcttcatgatattgttgtggagagcgacgatttcagcgac
aagcagaaatctatcatagttgagaagcttgcagaggtggacaaatgcctggcagacggt
gctgatgaatacttgcagttgatgagtctctgtgcccttgtgatgcagcagctaacacag
aacacctaa

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