Anser cygnoides (swan goose): 106033175
Help
Entry
106033175 CDS
T04896
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106033175 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106033175 (CNOT1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106033175 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106033175 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106033175
NCBI-ProteinID:
XP_066860839
LinkDB
All DBs
Position
12:complement(12856908..12916907)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYACHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSSVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaacaggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacgaaaccaaactttatctcgacgctgtcctacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatatttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagttcatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcatttggggtgggacag
gaacaaattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgtcct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagacttcatgcaa
gaagttggctatggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgtccgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcagggttgacagatggtattccgttacaatctatttcggctcctggcagtgggatt
tggagtgacgggaaggataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccacccgggatttcagattcgtgacagcaagggcctgcatattgtggtgtttggc
atccagagaggcttgggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacgcttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggatttgatcgaatctctgttgcgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccggatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactcggccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgcatgactttctta
aagagaagatgtccatctatcttgggtggccttgctccggaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttcccaggagctgtcagagacgatactcaccatggtggctaactgcagtagcgtc
atgaacaaggctaggcagccgccacctggagtcatgccaaaaggacgcccacctagtgcg
agcagcttggatgccatctctcctgtacagatcgactcgcttgcaggcatggcatctctt
agtttaggtggctcggctgctcctcatacccagagcatgcaaggcttccctccgaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcgtttccccctctttccacccaa
aaccagacaacaggtttcagtggcattggaggactctcttcacaacttccagtaggtggt
cttactacgggtagcctgactggtataggaactggagccctgggccttcctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaaccagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttataaccatccacca
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaagattccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttacaggagtacatagaatacggacagcagtctagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccatcacaatcactcgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaataccaccaatattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaacatgactcagaaggtcgaagaactgaaggag
acagtgaaagaagagttcatgccttgggtatcgcagtatctcgtgatgaaaagagtcagt
attgagccaaattttcacagcttatattcaaacttccttgacactcttaagaatccagag
tttaataaaatggttctgaatgaaacttacagaaacatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgattacactggctaaaaataagcccatcttgcacacggatttggatgtgaaatcactg
ctactggaagcatatgttaagggacagcaggaattgctttatgtagtaccatttgttgcc
aaagtcttagaatccagtgtcaggagcgtggtcttcaggcctccaaacccgtggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgacctaaaattgaatctgaag
tttgagattgaagtgctctgcaagaatcttgcattagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctctccgctccaaag
aaagatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccgcagccccagtacagttatcac
gacatcaacgtctattctttaggagggttggctccacatattaccttaaatcctacgatc
ccgctgttccaggcccacccccagctgaagcagtgtgtgcggcaggctatcgagcgagca
gtgcaagagctcgtccatcccgtggttgatcggtccattaagattgccatgacgacgtgc
gaacagatagtcaggaaggactttgcgctggattcggaggagtcacggatgcgtgtggcc
gcacaccatatgatgcggaacctgactgccgggatggccatgataacctgcagggaacct
ttgctcatgagcatagctaccaacctgaagaacagctttgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgcccagctagcgcaggataactgc
gagctagcgtgctgctttatccagaagacagctgtggaaaaggcaggccctgaaatggac
aagaggctagcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcccgttgtgttaacttaccaagctgaacggatgccagaacagatcaggctaaag
gttggaggtgtggacccaaaacagctggctgtttacgaagagtttgcacgcaatgtccct
ggctttttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
caagcttgggctacagatgatgtggcacaaatctatgacaaatgtatgacagaactggag
caacacctgcagtccattccacataccctggccatgaatcctcaagctcaagcactgcgc
agcctcttggaggctgtagtagtggctcgtaactcccgtgatgctatcgctgcgcttggg
ctgctgcagaaggctgtagagggcttactggatgccaccagcggggcagatgcagacctc
ctgcttcgctaccgtgagtgtcatctgcttgtgctgaaggctctgcaggacggtcgtgca
tatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagggatgag
tacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgttaacatgcaa
cagtacgatcttcacttggctcagtcaatggagaatggcttgaactacatggctgtggcg
ttcgccatgcagttggtaaagatcctgttggtggacgagagaagcgttgcgcatgttaca
gaggcagacctgttccacacaattgagacacttatgaggattaatgctcattccagagga
aatgccccagaaggattaccccagctgatggaagtggtccgatcaaactatgaagccatg
attgaccgtgctcatggaggtcccaatttcatgatgcattctggaatttcccaagcctct
gagtatgatgatccgccaggcctgagggagaaggcagaatacttgctgagggagtgggtg
aacctctaccattcggctgcagcgggccgcgacagtaccaaagcattctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacggatgac
ctgatcacccgctttttccgtctttgcaccgaaatgtgtgttgaaatcagctatcgtgct
caggctgagcaacagcacaatcctgctgccaaccccactatgattcgagcgaagtgctat
cacaatttggatgcctttgtgcgacttattgcactgctggtgaagcactctggagaggca
accaacaccgttacaaagatcaacctcctgaacaaggtccttggtattgtggtgggagtt
cttctacaagaccatgatgttcggcagagtgagtttcagcagcttccttaccatcgcatc
ttcatcatgttgctgttggaattaaatgctcctgagcatgtgctggaaaccatcaacttc
cagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctccaggt
tttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctggca
catacaccacagcagaagggttggcctatgtatgcccagttactgatcgatctcttcaag
tacttggctcctttccttagaaatgtggaactcaccaaacctatgcaaattctttacaag
ggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctttgtgactac
cactatgggttctgtgatgtgatcccacccaactgtattcagctaaggaatttgatcctg
agtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggtggac
atgttaagtgaaattaatattgctccacgaatactcaccaatttcactggagtgatgccg
cctcagttcaagaaagacctggattcctatctcaaaacccgttctccagttacttttctg
tctgatttgcgcagcaacttacaagtatcaaatgaacctggcaaccgctacaacatccag
ctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacatccacaacaaa
ggcagcacaccgtctatgagcaccattacccactcagcacacatggacatcttccagaat
ttggctgtagacctggacactgaaggtcggtacctcttcttgaacgcaatcgccaaccag
ctgcgatatcccaacagtcacacccactacttcagttgcaccatgctttacctgtttgca
gaggccaacactgaggctatccaggagcagatcactagggttctcttggaacgactgatt
gtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaatccg
gcatttaaattctggaaccatgaatttgttcactgtgctccagaaattgagaagttgttc
cagtcggttgcacagtgctgcatggggcagaagcaggcccagcaagtgatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
