Anser cygnoides (swan goose): 106040776
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Entry
106040776 CDS
T04896
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106040776 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106040776 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106040776 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acyg00535
]
106040776 (COL9A3)
Proteoglycans [BR:
acyg00535
]
Extracellular matrix (ECM) proteoglycans
Others
106040776 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106040776
NCBI-ProteinID:
XP_047930703
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Position
16:complement(3113865..3152904)
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AA seq
675 aa
AA seq
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MTVFPTLGLLFLCQLLATTSAQRVGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGQAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPYGLPGFPGPPGPPGPPGLPGIFPDGGGDIQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAG
DRGDIGFRGPPGIPGPPGKAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGIPG
KDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSG
EPGIPGDVGIPGERGLPGPRGATGPLGLQGPMGAPGVRGFQGPKGASGEPGLPGPTGIRG
EFGDRGPTGVTGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNG
TAGVPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGINGPDGDQGLQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAIGAQGTPGICDT
SACMGAVGASTSKKS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactgtattccccactcttgggctcctcttcctttgtcagctattagccaccacctca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagacggcgagccgggccctcctggtttgccaggcccaccagggccaaag
ggtgcaccaggaaagcctggagcagctggtgaagctgggttgcctggccttcctggagta
gatggtttaacaggaactgatggcccacctggcccaaatgggcctccgggagaccgtggt
gcattaggacctgccgggccgcctggacaagctggcaaaggactaccaggacctccagga
cctccaggacccagtgggcttccaggtggaaatggatttcggggtcctcccggaccttat
ggtctgccaggattcccagggcctcctggaccacccggacctcccggtcttccaggcatc
tttcctgatggcggtggggacatccagtgcccagctctgtgcccaccgggtcctccaggt
cctccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgaaata
ggaaaagaaggagagaagggcaaccctggcccgccaggtcctccaggcattcctggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggtccaatgggtccagctggc
gacaggggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggagaccaaggaaacaaaggacctcaaggattcagaggacccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggcacgtggactcataggagaacccggcatacctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggacttcctggactgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggcgatgtcggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggcccgcttggtctccaaggcccgatgggagcccctggtgtcagaggtttc
cagggtcctaaaggtgccagcggggaacctggccttcctggtccaactggaattcgtgga
gagtttggtgacaggggccctaccggtgttactggtcccaaaggtaaccagggcattgct
ggagcagatggcctcccgggtgacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtcccaaaggtgtccagggacctaacggg
acagctggagttccagggattccaggacacccagggcccatgggccatcaaggggagcaa
ggcgttcctggcatcacaggaaaacctgggcctcctggcaaagaggccagtgaacaacac
ataagagaactctgtggggagatgataaatgatcaaattgcccagttagctgctaacctg
aggaagcccttgtctccgggaatgacaggtcggcctggcccggctgggcctccggggcct
cctggggctacgggaagcgttgggcatcccggtgctcgtgggcctcctggctacagaggg
ccaacaggagagctcggggatcctggtcccagaggtgacactggcgaaaagggagataaa
ggacccgttggacaaggcatcaatggacccgatggtgatcaaggacttcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgtgacggtgctcagggtgaacccggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgcgacaca
tcggcttgcatgggagctgttggagcatcgacttccaaaaaatcataa
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