KEGG   Anser cygnoides (swan goose): 106040776
Entry
106040776         CDS       T04896                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg04510  Focal adhesion
acyg04512  ECM-receptor interaction
acyg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106040776 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106040776 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106040776 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:acyg00535]
    106040776 (COL9A3)
Proteoglycans [BR:acyg00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   106040776 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 106040776
NCBI-ProteinID: XP_047930703
LinkDB
Position
16:complement(3113865..3152904)
AA seq 675 aa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NT seq 2028 nt   +upstreamnt  +downstreamnt
atgactgtattccccactcttgggctcctcttcctttgtcagctattagccaccacctca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagacggcgagccgggccctcctggtttgccaggcccaccagggccaaag
ggtgcaccaggaaagcctggagcagctggtgaagctgggttgcctggccttcctggagta
gatggtttaacaggaactgatggcccacctggcccaaatgggcctccgggagaccgtggt
gcattaggacctgccgggccgcctggacaagctggcaaaggactaccaggacctccagga
cctccaggacccagtgggcttccaggtggaaatggatttcggggtcctcccggaccttat
ggtctgccaggattcccagggcctcctggaccacccggacctcccggtcttccaggcatc
tttcctgatggcggtggggacatccagtgcccagctctgtgcccaccgggtcctccaggt
cctccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgaaata
ggaaaagaaggagagaagggcaaccctggcccgccaggtcctccaggcattcctggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggtccaatgggtccagctggc
gacaggggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggagaccaaggaaacaaaggacctcaaggattcagaggacccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggcacgtggactcataggagaacccggcatacctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggacttcctggactgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggcgatgtcggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggcccgcttggtctccaaggcccgatgggagcccctggtgtcagaggtttc
cagggtcctaaaggtgccagcggggaacctggccttcctggtccaactggaattcgtgga
gagtttggtgacaggggccctaccggtgttactggtcccaaaggtaaccagggcattgct
ggagcagatggcctcccgggtgacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtcccaaaggtgtccagggacctaacggg
acagctggagttccagggattccaggacacccagggcccatgggccatcaaggggagcaa
ggcgttcctggcatcacaggaaaacctgggcctcctggcaaagaggccagtgaacaacac
ataagagaactctgtggggagatgataaatgatcaaattgcccagttagctgctaacctg
aggaagcccttgtctccgggaatgacaggtcggcctggcccggctgggcctccggggcct
cctggggctacgggaagcgttgggcatcccggtgctcgtgggcctcctggctacagaggg
ccaacaggagagctcggggatcctggtcccagaggtgacactggcgaaaagggagataaa
ggacccgttggacaaggcatcaatggacccgatggtgatcaaggacttcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgtgacggtgctcagggtgaacccggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgcgacaca
tcggcttgcatgggagctgttggagcatcgacttccaaaaaatcataa

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