Amycolatopsis cynarae: ORV05_30285
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Entry
ORV05_30285 CDS
T09969
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ORV05_30285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyn03021
]
ORV05_30285
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_30285
Enzymes [BR:
acyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ORV05_30285
Transcription machinery [BR:
acyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ORV05_30285
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ORV05_30285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WAL65160
UniProt:
A0ABY7AYS4
LinkDB
All DBs
Position
complement(6292443..6295943)
Genome browser
AA seq
1166 aa
AA seq
DB search
MAVSPANQATAATTSAASTSNPSGIPGAPKRVSFAKIREPLTTPNLLDVQIQSFQWFTGD
EKWFERRVEEGEENPVGGLEEVLNEISPIEDFQGSMSLSFSDPRFDEVKASVEECKDKDM
TYAAPLFVTAEFVNNNTGEIKSQTVFMGDFPVMTDKGTFIINGTERVVVSQLVRSPGVYF
DQAIDKTTDKDVFSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQ
IRERFSFSETLLATLEKDHTPGVDEALLDIYRKLRPGEPPTKENAQALLENLFFKDKRYD
LAKVGRYKVNKKLGLDLPYETGTLTEEDIVTTIEYLVRLHAGEDKMGQDDRVIPVEVDDI
DHFGNRRLRTVGELIQNQIRVGLSRMERVVKERMTTQDVEAITPQTLINIRPVVAAIKEF
FGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETPE
GPNIGLIGSLCSYARVNPFGFIETPYRKVVEGKVTNQIDYLTADEEDRFVKAQANAPLTE
DGYFAEDRVLVRRKGGEVELIDPMDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGAN
MQRQAVPLLRNQSPLVGTGMELRAAIDAGDVLVAEQAGVVEELSADLITIMHDDGTRKSY
GLYKFRRTNHGTCFNHRPIVNEGDRVEKGQVIADGPSTENGEMALGKNLLVAVMPWEGHN
YEDAIILSERLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLADLDERGII
RIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGI
RVFSREDDDELPPGVNELVRVYVAQKRKIQPGDKLAGRHGNKGVIGKILPVEDMPFMEDG
TPVDIVLNTHGVPRRMNIGQILELHLGWLASQGWKVEGSPEWARNLPEELYDVDPGTNTA
TPVFDGAKEEELTGLLSSTLPNRDGERLVGPNGKAVLLDGRSGEPFPYPVAVGYMYILKL
HHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKS
DDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDSDDE
DLERAAANLGINLSRNESPSVDDVVQ
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctctcccgcgaaccaggccactgctgcgaccacctcggctgcttccacctcg
aacccctcgggcatcccgggagcccccaagcgggtctccttcgcgaagatccgggaaccg
ctgaccacgcccaatctgctcgacgtgcagatccagtcgttccagtggttcaccggtgac
gagaagtggttcgagcgccgcgtcgaggaaggcgaagagaacccggtcggcggcctcgaa
gaagtcctcaacgagatctcgcccatcgaggacttccagggctcgatgtcgctgtccttc
tccgacccgcgcttcgacgaggtgaaggcctccgtcgaggagtgcaaggacaaggacatg
acctacgcggctccgctgttcgtcacggcggagttcgtcaacaacaacaccggtgagatc
aagagccagacggtcttcatgggcgacttccccgtgatgaccgacaagggcacgttcatc
atcaacggcaccgagcgtgtcgtggtgtcccagctggtccgttcgccgggtgtctacttc
gaccaggcgatcgacaagaccaccgacaaggacgtcttcagcgtcaagatcatcccgagc
cgtggggcgtggctcgagttcgacgtcgacaagcgtgacaccgtcggggtgcggatcgac
cgcaagcgccgccagccggtcaccgtgctgttgaaggcgctcggctggaccaccgagcag
atccgcgagcggttctccttctcggaaaccctgctcgcgacgctcgagaaggaccacacc
ccgggtgtcgacgaggcgctgctcgacatctaccgcaagctgcgtccgggcgagccgccg
acgaaggagaacgcgcaggccctcctggagaacctgttcttcaaggacaagcgctacgac
ctggcgaaggtgggccgctacaaggtcaacaagaagctgggcctcgacctcccgtacgag
accggcacgctgaccgaagaagacatcgtcaccaccatcgagtacctggtccggctgcac
gccggcgaggacaaaatgggccaagatgaccgtgtcatcccggtcgaggtggacgacatc
gaccacttcggcaaccggcgcctgcgcaccgtgggcgagctgatccagaaccagatccgg
gtcggcctctcccgcatggagcgcgtggtcaaggagcggatgaccacccaggacgtcgag
gccatcacgccgcagaccctgatcaacatccgcccggtggtggccgcgatcaaggagttc
ttcggcacctcccagctgtcgcagttcatggaccagaacaacccgctgtcgggcctgacc
cacaagcgccgcctgtcggcgctgggccccggtggtctgtcccgtgagcgcgccggcatg
gaggtccgcgacgtgcacccgagccactacggccggatgtgcccgatcgagaccccggaa
ggcccgaacatcggcctcatcggttcgctgtgctcctacgcccgagtcaacccgttcggc
ttcatcgagacgccgtaccggaaggtcgtcgagggcaaggtcaccaaccagatcgactac
ctgaccgccgacgaggaggaccgcttcgtcaaggcgcaggccaacgcgccgctgaccgag
gacggctacttcgccgaggaccgcgtgctggtccgccggaagggcggcgaggtcgagttg
atcgacccgatggacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcg
accgccatgatcccgttcctcgagcacgacgacgcgaaccgcgcgctgatgggtgccaac
atgcagcgccaggccgtgccgctgctgcgcaaccagtcgccgctggtcgggaccggtatg
gagctgcgggccgcgatcgacgcgggcgacgtgctcgtcgccgagcaggccggtgtggtc
gaagagctgtcggccgatctgatcacgatcatgcacgacgacggcacccgcaagagctac
gggctgtacaagttccgccgcaccaaccacggcacctgcttcaaccaccggccgatcgtc
aacgagggcgaccgggtggaaaagggccaggtcatcgcggacggtccgtccaccgagaac
ggtgagatggcgctcggcaagaacctgctcgtggcggtcatgccgtgggaaggccacaac
tacgaagacgcgatcatcctctccgagcggctcgtgcaggacgacgtgctcacctcgatc
cacatcgaggagcacgagatcgacgcacgggacaccaagctcggtgccgaggagatcacc
cgggacatcccgaacgtctccgaagaggtactggccgacctggacgagcgcggcatcatc
cgcatcggtgccgaggtccgcgacggcgacatcctggtcggcaaggtcacgccgaagggc
gagaccgagctgaccccggaggagcgcctgctccgcgcgatcttcggcgagaaggcccgc
gaggtccgcgacacctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcatc
cgggtgttctcgcgtgaggacgacgacgagctgcccccgggcgtcaacgagctggtccgc
gtctacgtggcccagaagcggaagatccagccgggcgacaagctcgccggccggcacggc
aacaagggtgtcatcggcaagatcctgccggtcgaggacatgccgttcatggaggacggc
accccggtcgacatcgtgctgaacacccacggtgtgccgcgtcgtatgaacatcggccag
atcctcgaactgcaccttggctggctggcctcacagggctggaaggtcgagggcagcccc
gagtgggcgaggaacctgcccgaggagctctacgacgtcgaccccggcacgaacaccgcc
acgccggtgttcgacggcgccaaggaggaggagctcacgggtctgctgtcgtcgaccctg
cccaaccgcgacggtgagcggctggtcgggccgaacggcaaggcggtgctgctcgacggc
cgctccggcgagccgttcccgtaccccgtggccgtcggctacatgtacatcctcaagctg
caccacctggtcgacgacaagatccacgcccggtcgaccggcccgtactcgatgatcacg
cagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgaaatggagtgc
tgggcgatgcaggcctacggtgcggcctacacgctgcaggaactgctcaccatcaagtcg
gacgacgtggtgggccgcgtgaaggtgtacgaagccatcgtcaagggcgagaacatcccg
gacccgggcatcccggagtcgttcaaggtgttgttgaaggagctgcagtcgctctgcctc
aacgtggaggtcctgtcctccgacggtgcggcgatcgagatgcgcgactccgacgacgag
gacctcgaacgcgccgccgccaacctcggcatcaacctgtcccgcaacgagtcgccctcg
gtggacgacgtcgtgcaatga
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