Alternaria dauci: 96080436
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Entry
96080436 CDS
T10615
Symbol
ACET3X_000114
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96080436 (ACET3X_000114)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96080436 (ACET3X_000114)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
96080436 (ACET3X_000114)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
96080436 (ACET3X_000114)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Prion
Motif
Other DBs
NCBI-GeneID:
96080436
NCBI-ProteinID:
XP_069310356
LinkDB
All DBs
Position
1:complement(join(402815..402877,402939..408841,408910..409225,409286..409870))
Genome browser
AA seq
2288 aa
AA seq
DB search
MSQQHPWGAPRPNQSTRLTPISTAIAHEQRSTTASTPSPATANFPSLPPASSSRLARSRQ
SSAASSTSSPFSPQAGQQLPASQLLSSRGSSRTIAPQAASHLASSAAAATNGHGAQSSSG
GGASKLVRASPSLSASSTTGSPSTATATNNPSGPSSQSLSRIVIAQVFLLLSQVGPLKDD
KDRAKWDTQTEQIRKLVDSHGMEVFSKYFRRVLQNNAATIFGTGARNADSNGSYQILLTE
VHKIRKEPEQADKIAESISSSEGDLFRDFDLQTFVSHFKLDSVAKTMLALACRKTDLRTK
ADAVLSTVGDDLLMAVAQPTQPEDMSHEYLAVLVERLLQDPPQGWDEEKKMSLAYAVQMR
YQQTHQQIPGIVESKLILVELTDGSRNPLVKLVKQAGPQGTATVEACKEVLASAETRDIS
YQQVAAVLLYLALSTGYNAKNFVAALREHRTGQRIDWQDVVLAFDRDHLRIEKHQFLAIY
NALLPVAQDTDKFDIQALWGGQWQHDLTQLYFVVAFLSSTRQELDVTQIPRLRTSYSLKM
FENASDDAKSFAEEAVKHPFVSLDATAALFNMIFQTSETYHTAQLMGIPDLVINPHTAEF
LVAAAAVPKPWGALQEQALKQLFDPYFTKQLPIYNFVLYGLWKHDSQWLTDRFVDAYNAD
SMTLSLVLEHAETNNWLEQLIRSNTDISLDLAAQAHARGKFELGTWLEQTFEQAGPLFRR
ILTNFLSARAAEEMQRARDDHQPLNLPLAVKTVYPLLWFLAQCGLPEPELLPLQRNCIQA
YPRLINYGEGVDDIIDANGQNGNSLPEEADKKMQEHFKNMYSGESDVRDIISALKKYKES
RDPADQDLFACMIHGLFDEYNCFGEYPLEALATTAVLFGGIINFNLLSRIALQVALAMVL
EAVQEYRPEDSMYKFGLQALIHFSNRLHEWPNYCDQLLIVPGLQGTEIFAKAEEVVGQQV
GEINGDGHNGIGLTNGNGVDDALHQEPAIPKFSCLYVDPPLRPELYEDPDEDVQDKVLFV
LNNVSERNLRDKISDLTEAVEERHHQWFANYLVEERAKMQPNFQQLYLDMLDLFNDKTLW
AEVLRETYASVIRMLNTDSTLGSTERGHLKNLGSWLGSLTIARDQPIKFRNISFKDLLHE
GYDTDRLLLVIPFTCKVLVQAAKSSIFRPPNPWIMEMLGVLMELYHFADLKLNQKFEIEV
LCKGLELDHKDIEPTNSIRGRPPTDEEFLGSMVPEGLEAFSDLSIMGLNRGARGPNERFS
SAAITAALPDFTNQLQYPPSGNSAVPPAALKKIFLTAVNQAIQEIIAPVVERSVTIAAIS
TSQLINKDFAMEPDEEKFRNAAHTVVKALSGALALVTCKEPLRMSIQNHIRVTARDLPDQ
ALPEGHIIMFVNDNLDLVCNTVEQAAEMSSLAEIDMQIEEAVRIRRMFRSSRPNEPFKDA
NISPWAFYIPEPYKQMPGGLNREQLAIYEDFGRQSRGAPHTNNTSQDGGRQLPDVLQDQF
AAVPNLPTPGAAPAEPRQPAQQARLQSLQAPHAPLTQQQANGYMDAPGLERGQRSVEDLL
LELNRAIKEAPEERISELQPGSSNVHQVFDQLITSIEYAGPNKETWAFRIAGQVTNHLFS
DSLSRLEVEVMAHLLSHLCQLSVQTSRQVLMWLATLHDDDRIFKSTVMVALMEVSLMDMH
RLNTTIAKAIQERRVAAVEMLSSLMEELLLNEHPSAFRADFAMSIDALTTWLAEDPSFEL
GKRVLGNLQVPSNELMPTPPGSGHKDQLEYVFDEWVHLQMETIPKKTVGAFIYQLHQQKV
METQESSVAFIRACIDSSVAAYEQEHSAPFGNGNEDIATVKIDALGRLVVDLVVYQGEQD
GAVKESKARYLDQILVVVVLVLCNHHSTRGDAFNQKVFFRLFSAILFHLNDAVKEESLAD
QKADIFLAVARALLVLQPSHLQRFTFSWLALVAHRIFVPAMLEEGQGDKRWEVYAQLIET
LLIFTGKLIKPTGETVMAEQFYRGVLRVLLVIHHDFPEFLVENHFRFCNSIPMHCTQLRN
LIVSAYPSTILEMPDPFTAGLKADRLEHDLQAPVIRADIAQLLSDAGIKDALDSLLKGSE
LKNKDVDKVCQAVYYAEPQPAAFELVSTTANPALIHAITLYIGIATLGTGSASVPIFDAE
SPATKVIERLVKDFHPEARFHFISAIANQLRFPNTHTHFYSYTLLHLFGPPNDDSLALEI
QETITRVLLERLLVHRPHPWGLIITLLEILKNPTYTFWELPFVKAAPEVERLLNALFTHA
QASPRPLA
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaacacccctggggcgccccgagaccaaaccaaagcacacgcctcacgccc
atctcgactgcaattgcccacgagcagcgctccacgacggccagcacgccctcgcccgcc
acggcaaacttcccctcgctgccgcccgcgtcttcatcgcgcctcgcccgcagccgccag
tcgtcggctgcctcgtcgacgtcgtcgcccttttcgccccaggcaggacagcagctcccc
gccagccagctgctgtcctcgagagggtcgtccaggaccatagcgccccaagctgcctcg
cacttggcttcctccgccgcagccgctaccaacggccacggcgcacagtcaagtagcggc
ggaggagcctccaagcttgtccgcgcctcgccttcgctctccgcctcgagcaccacgggc
tcgcccagcaccgccacggccaccaacaacccctcgggcccctcgtcccagagcctctcg
cgcattgtcattgcccaggtcttcctgctgctcagccaggtcgggcccctcaaggacgac
aaggaccgcgccaagtgggacacgcaaaccgagcagattaggaagctcgtcgactcgcac
ggcatggaggtcttttcaaaatacttccgccgcgtgctgcagaacaatgccgccaccatc
ttcggcaccggcgcccgcaacgccgacagcaacggcagctaccagatcctcctcaccgag
gtgcacaagatacggaaggagcccgagcaggcagacaagattgcagagtcgataagctcc
agcgagggcgacctgttccgcgactttgacctgcagactttcgtatcccacttcaagctc
gactcggtagcaaagacgatgctcgccctcgcctgcagaaagacagatctccgaaccaaa
gctgatgccgtactgtccaccgtaggcgacgacctgctcatggccgtcgcgcagcccacc
cagccagaggatatgagccacgaatacctcgccgtcctcgtcgaacgcttgctgcaagat
ccgccacagggctgggacgaagagaagaagatgagcctcgcgtatgccgtccagatgcga
taccagcagacacaccaacagatccccggcatcgtcgagtcgaagctgatactcgtcgag
ctcacggatgggtcgcggaaccctctggtcaagttggtaaaacaggccggccctcaaggc
acagctaccgtcgaggcatgcaaagaggtgctcgcttcggccgagacacgcgacatcagc
taccagcaagttgccgcagtgctcctctacctcgccctctctaccggatacaacgcaaag
aactttgtcgccgcgctacgcgaacaccggaccggacagcggatagactggcaggacgtc
gtgctggctttcgaccgggaccatctgcgcatcgagaagcaccagttcctggctatatac
aacgcgctgctccccgttgcccaagacacggacaagttcgacatacaagccctatgggga
ggacaatggcagcacgacttgacgcaattgtacttcgtagtcgctttcctgtcctccaca
cggcaagagctggacgtgacgcagatccccaggttacgcacctcctactcgttaaagatg
ttcgaaaacgcgtccgacgatgccaaatccttcgcagaggaagcagtcaaacaccccttt
gtctcgctcgacgcgaccgccgctctcttcaacatgattttccagacatctgagacctac
catacggcacagctgatgggcatacccgacttggtcatcaatccacacacagccgagttc
cttgtagcggcagcggcagtcccaaagccgtggggtgcattgcaagagcaggcattgaaa
cagctgttcgatccatacttcaccaagcagctgcctatatacaatttcgtcctctacggt
ctatggaaacacgactcccaatggcttacagatcgatttgtcgacgcctacaacgccgac
tcaatgactctcagtctggtacttgagcacgccgagacgaacaactggttggagcaactg
attcgcagtaacactgacatcagtttggatttggctgcacaagcgcacgcgcgtggcaag
ttcgagcttggtacctggctggagcagacgttcgagcaggctggaccgctattccgtcgc
attctgactaactttttgagtgcgcgggctgcagaagagatgcaacgagcacgagacgac
catcaacctctcaacctacccctcgctgtcaagacggtatacccactgctctggttcctt
gcacagtgcggtctgcctgagccggaactactgcccttgcaacggaattgcatacaggcg
tacccgcgcttgatcaactatggtgaaggcgtggatgatattatcgacgccaacggccag
aacggaaactcgcttccggaagaggcagataagaagatgcaagagcatttcaaaaacatg
tacagcggcgaaagtgatgtaagggacatcatctcggcgctcaagaagtacaaggagtcg
cgtgatcccgcggaccaagatctgttcgcatgcatgatccacggcctcttcgacgagtac
aactgcttcggggaatatcctctagaagccttggctacgactgctgtgcttttcggaggt
atcatcaacttcaacctcttgtcccgaattgcacttcaggtcgcgctcgccatggttcta
gaagctgttcaggaataccgacctgaagacagcatgtacaagttcggcctccaagctctt
atacacttctcgaaccggctgcacgagtggcccaactactgcgaccagctcctcattgtt
cctgggctccaagggacggagatttttgctaaagctgaagaagttgtaggccagcaagtc
ggcgaaatcaacggcgacggccacaacggcataggattaactaacggtaatggtgtcgat
gatgcccttcaccaggagccggccatacccaagttcagctgcctctacgtcgatcccccg
ctccgcccagagctgtacgaggacccagacgaagacgtccaggacaaagttctgtttgta
ctgaacaacgtctccgagcgcaacttgcgcgataagattagcgatctcaccgaagccgtc
gaagagaggcatcaccaatggttcgcaaactatcttgtcgaggagcgcgctaaaatgcag
cctaacttccagcaactttacctcgacatgcttgacctcttcaacgacaagaccctatgg
gctgaggtgctccgtgaaacgtacgcgagcgtcattcgtatgctcaatactgactccacc
ttgggttctacggagcgtggccatcttaagaatctgggctcttggcttggttccttaaca
attgcccgagaccagccgatcaagttccgcaacatttcgttcaaagacttgctacacgag
ggttacgatactgaccgccttcttcttgtgatccccttcacttgcaaggtgcttgtacag
gctgccaagtcttccatcttcaggcctcccaatccttggatcatggagatgctaggagtc
ctcatggaactttaccactttgcagacctgaagttgaaccagaagttcgagatcgaagtt
ctctgtaaaggcctggagcttgaccacaaggacattgagcccacaaacagtatccgagga
cgaccgccaacggatgaagagttcctcggatccatggttcctgaaggactggaagcgttt
agtgatctttccatcatgggcctgaatcgtggcgcccggggtccgaacgaacgattctca
tcagcggcaatcacggcagctctgcccgacttcaccaaccagcttcagtacccgccatct
ggaaacagtgcggttcctccagcggcactgaagaagattttccttactgccgtcaatcaa
gccatccaggagattatcgccccggtagtagagcgctctgtcactattgctgccatctcg
acatcgcagttgatcaacaaggactttgctatggagcccgacgaggagaagtttcgcaac
gcagcacacactgttgtcaaggctctttctggtgccttggcccttgttacttgcaaggaa
ccattacgcatgagtattcaaaaccacatccgtgtaacagctagagacctccccgaccaa
gcgctgccagaaggacatatcatcatgtttgtcaacgacaatcttgaccttgtctgcaac
acggttgagcaggccgctgaaatgtcgtcccttgcagagattgacatgcagattgaggaa
gcagtccgtattcgccgaatgttccgcagctctcgtccaaatgagccattcaaggatgca
aacatcagcccctgggcattctatatccctgaaccgtacaagcagatgcctggtggtctg
aatcgtgagcagttggccatctacgaagactttggtaggcagtcgcgaggtgctccgcac
acgaacaacacgtcccaagatggtggacgtcagcttccagacgtcctccaagaccagttc
gcagcggtgccgaaccttcccaccccaggtgctgcgccagcagagccacgccaaccagca
cagcaagcccggctacagagtcttcaagcccctcatgcacccttgacacaacaacaagct
aacggctatatggatgctccaggcttggagcgtggtcagcgtagtgttgaggatcttctc
ctcgaactgaatcgcgctatcaaggaggcgccagaggaacgtatcagcgaacttcagcct
ggtagcagcaatgttcaccaggttttcgaccagctcatcacgagcatcgagtacgcgggc
cctaacaaggaaacctgggctttccgcattgcaggccaagtcactaaccatctcttttcc
gactctttgagccgcttggaagttgaggtcatggcgcatctgctaagtcatctctgccaa
ttgtccgtccagacttctcggcaggtactcatgtggttggcgactctacacgacgacgat
aggatcttcaagtctacggtcatggttgctttgatggaggtcagcctgatggatatgcac
cgcctgaacacgactattgccaaggccattcaagaacgacgcgtcgctgcagtagagatg
ctgtctagcttgatggaggagctcctcctgaacgaacacccaagtgcgttccgtgccgac
ttcgccatgtccatcgacgctctcaccacctggctagcagaggacccatccttcgagctt
ggaaaacgtgtactcggcaatctacaggtaccatccaatgagctcatgcctacgccacca
ggatccggacacaaggaccaactcgagtatgtcttcgatgagtgggtgcatctccagatg
gaaaccattccaaagaaaacagttggcgcattcatctaccagctccaccagcaaaaggtt
atggaaactcaagaatcatccgttgcatttattcgcgcctgcatcgactcttccgtcgcc
gcatacgaacaagagcactccgcgccgttcggtaacggtaacgaagacattgcgaccgtt
aagatcgatgcacttggtcggctggtcgtggaccttgtcgtctaccaaggcgagcaagac
ggagctgtcaaggaaagcaaggctaggtacttggatcaaatacttgtcgtagtcgtgctt
gttctctgcaaccaccacagcacacgaggcgatgcattcaaccagaaggtcttcttcagg
ttgttctctgccatccttttccacctcaacgacgcggtaaaggaagagtctctcgcagac
cagaaggccgatattttccttgctgttgccagggctctgttggttcttcagccctcgcac
cttcagcggttcacattctcatggctagcgctagttgctcatcgcatcttcgtacctgct
atgctggaagagggccaaggagacaagcgatgggaagtctatgcccagcttatcgagacg
ctcttgatcttcacgggcaagctcatcaagcctactggagagacggtcatggctgaacag
ttctaccgtggtgttctgcgagttctgctagtgatacaccacgacttccccgagttccta
gtcgagaaccacttccggttctgcaacagcattcctatgcactgcacacaactgcgcaat
ctcatcgtcagcgcctacccttccaccattcttgagatgccagatccgttcacggctgga
ctcaaagccgaccgactggagcatgaccttcaagcgccggttatccgtgccgatatcgcg
cagttgctttcagatgcaggaatcaaggatgctctagacagcctcctcaagggctcagag
ttgaagaacaaggatgttgacaaggtgtgccaagcagtctattacgcagagcctcagcca
gcagcgtttgagctcgtttctacgacagcgaacccagcgttgatacatgcaattactctg
tacattggcatcgcgactctaggcaccgggtcggctagcgttccgatctttgatgcagag
agcccagctaccaaggtcatcgagaggcttgtcaaggacttccacccagaggccaggttc
catttcatcagcgccatcgcgaaccagctccgcttcccaaacacgcatacccatttctac
agctatacgctactccacctcttcggacctcctaacgacgattcgctcgcattggagatc
caagagaccattactcgcgtgctattagagcgcctgctagtccaccgtccacacccctgg
ggactcattatcacgctgttggagatcttgaagaacccaacctacacgttctgggaattg
ccgtttgtcaaagcagctcctgaagttgagcggttgcttaatgcactgtttacgcatgca
caggcgagtccgcgtccgctggcttag
DBGET
integrated database retrieval system
