Alternaria dauci: 96081375
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Entry
96081375 CDS
T10615
Symbol
ACET3X_001053
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
96081375 (ACET3X_001053)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96081375 (ACET3X_001053)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
96081375 (ACET3X_001053)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_12
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_11
E_motif
DUF7523
Motif
Other DBs
NCBI-GeneID:
96081375
NCBI-ProteinID:
XP_069311295
LinkDB
All DBs
Position
1:3367860..3371291
Genome browser
AA seq
1143 aa
AA seq
DB search
MASHADSAHDLLDLDISTLRQFLELFPNEGLSKVITGWLSSGISKYPLTEEGDSREGPDL
SEGGVALTQDVPVSQEDCLVLMTEGLGEAARSPLAHCLLGDYYLFLEEYESAVETTRKGL
KYAVAEAKKTDLSFQKTRDALSSTLATALVYYQAPRNHLEAKGIFESILKRKPQFTSALI
GIGLVLEEEEEYEQAFQFLEKALQQDPSNGRIGAESAWCQALAGDYKTGLERLQGYLDYP
QLDASKQRGRELRAQTLYRIGVCLWELDPSKAARKDRQRTYAKLLAAIKANSNYAPAYTL
LGIFYEDYNKDRKRARQCFQKAFELSPSEVVAAERLARLFANQGEWDIVEVVSQRVVDSG
KARQTPGSKRKGVSWPFSALGVVQMNKQEYQKSIVSFLSALRISPDDYYSYVGLGESYHN
SGRYNSASRAFNYAENPTDGVVLKRSDEEGWFTKYMLANVNRELSEFDEALAGYEAVLAS
RPKEVGVSIALLQTLVEKGWHCVETGFFGEAANSATRGIEVALTITEYKPDAFNLWKAVG
DACSLFTWVQEKLKQFPVELVEKVLRSKSDMKIDFDEHKDIDGLGQDALAALSTDEHTIL
AKVLKAAILAQKRAISSCAHDIHAQAVAWYNLGWTEYRAHVCLEQEGIEGFKLTTYLRAA
MRCFKRAIELEAGNSEFWNSLGVITTTLNPKVAQHAFVRSLHLNERSVHTWTNLGALYLL
QNDHELAHTAFSRAQSQDPDYSLAWVGEGIIALLTGDSNEALSHFTHAFELSESSLLLTK
RQYAVSAFDFLVSSPSSSSNITNLIQPLFALQQLNIQVPYDISHKHLAALFLERVGDYDA
AVTALQAVNETVEQEYEKSESLTSLARVAQAKTDLSRNLLAIGSYGSAVEEAETALDLLS
EVESDADQSVLSKDHIIKSKLSARLTAGLAHYFSGSFDAAIPYFRTSLEATGANPDIICI
LAEVLWAKGGETEKQVARDQLFAAIEKHEGHVGLLTLIGAMTVLDDDLETMEAIKDDLDR
LRTNKELSDEQLARVEKVVEAISVSLGGEEQELDEARRSVMLAPWKHTGWSELADAAGGD
VFASTLAKETAMRNAPPNGTLSAVGLAGAMGSTGDVRDAQRAIMLAPWCTDGWSALAECV
QSA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacacgcggacagtgcgcacgacctgctggatctcgacatatcgacattgcgg
caattccttgagctattccccaatgaaggcctatcaaaagttatcactggctggctgagc
agtggcatatcaaaatacccgcttacggaagagggcgactcaagagaaggacctgacctt
agtgaaggaggggtagctcttacccaagatgtgcccgtatcacaagaggactgcttggtg
ttgatgacggaagggcttggggaggctgcgaggtcaccactggcgcattgcttgctcgga
gactactacctgttcttggaagagtacgaaagcgcagtcgaaacgacaagaaaaggcctc
aagtacgcggttgccgaggcgaagaaaaccgacttgtccttccaaaagacgcgcgatgct
ttgagcagcacacttgctactgccctggtctattaccaggctccaagaaaccatctggag
gccaaaggcatcttcgaatccatcttgaagcgcaagccacagttcacttctgccctcatc
ggcatcggactggtcttggaagaagaagaggaatacgagcaagctttccaattccttgaa
aaggcgctgcagcaagatccctcaaacggccgcataggtgcagaatcagcctggtgtcaa
gcacttgcaggcgactacaagactggattagaaagactccaaggatatctcgactatccg
cagctcgatgcctccaagcaaagaggccgtgagctccgcgcgcagacactttataggata
ggtgtctgtttatgggagctcgacccatcaaaggctgcgaggaaggaccgccaaagaacg
tacgcgaagctacttgcggcgatcaaagcaaactcaaattatgctccagcgtacactctg
ctcggcattttctacgaagactacaacaaggaccgcaaaagagcacgacagtgctttcag
aaggcttttgagttatcgccctctgaggttgttgcagcagagcgcttagcacgccttttc
gccaatcaaggcgagtgggacatcgttgaggttgtctcccagcgagtagtggactctggt
aaagcgcgccagacgccaggctcaaaaagaaaaggcgttagctggcctttctccgcactg
ggtgtcgtgcagatgaacaagcaagagtaccaaaagagcatcgtgtcgttcttatccgcg
ctacgcatcagcccggatgactactactcctatgtcggcctcggtgagagctatcataac
tccggacgatacaactcagcatcacgcgcgttcaattacgcagaaaaccccacagatggt
gttgtgttgaagaggtcagatgaagagggatggtttacaaagtacatgcttgccaatgtc
aatcgcgagttgagtgagttcgacgaagccctcgcggggtacgaagcagtactagcctct
cgaccgaaagaagtcggcgtctcaatagcactcctacagacgcttgtagagaagggttgg
cattgcgttgagacgggctttttcggagaggctgccaacagcgccacccggggtatcgag
gttgcgctgacgataaccgagtacaaaccggatgctttcaacctttggaaagctgtcggt
gatgcatgcagtttgttcacctgggtccaggaaaagctcaagcaattccctgtggagttg
gtcgagaaggtgctgcgcagcaagtcggacatgaagatcgattttgacgagcacaaggac
atcgatgggctcggtcaggatgctttagctgcactttccacagacgaacacactatcctc
gcaaaggtgctcaaagccgcgatacttgcacaaaagcgagcaatatctagttgtgcgcat
gacatacacgcacaagctgtggcgtggtacaacctaggatggactgagtacagagcgcac
gtctgcttagagcaggaaggcattgaaggtttcaaattaacgacatacctccgagcagct
atgagatgtttcaaacgcgctatcgaactcgaggccggcaattctgagttctggaactcg
cttggtgtcattacaacgacattgaaccctaaggtcgcgcaacatgcttttgttcgctcc
ttgcatctgaacgaacgcagtgtgcacacttggacgaaccttggagcgctttacctgcta
caaaatgatcacgagcttgcgcacaccgccttttcacgagcgcaatcacaagatcccgac
tattcgttggcctgggtgggcgaaggtatcattgcattgcttaccggagactccaacgag
gcgctttcccatttcacccacgcattcgagctctcagagtcatcattgctcttgaccaag
cgccaatatgccgtctcggctttcgacttccttgtttcttcgccttcgtcatctagcaac
atcacgaacctcatacaacctctgttcgcgctccaacagctcaatatacaggtaccttac
gacatttcgcacaagcacctcgcggcactattcctagagcgggtcggcgactacgatgca
gcagtaactgctcttcaagccgtaaacgagaccgtcgagcaagaatacgagaagtcagag
tcgctgacatcactggcccgtgttgcacaagccaagacagacctgtctcgaaatctcctc
gccatcggatcttatggttcagctgtggaagaagctgagacggcattggatctgctctcg
gaggtagaaagcgatgcagaccagtctgtgttgtccaaggatcatatcataaagagtaag
ctatcagctcgtcttacagctggtctagcacactacttcagcggctcctttgatgccgcc
ataccctatttccgaacgtcgctcgaggcaaccggagccaacccagacatcatttgcatc
ctcgccgaagtgctctgggccaagggtggagagaccgagaagcaagtggcccgcgaccaa
ctctttgccgctatagagaagcacgaaggccatgtcggcttgttgacactcatcggtgcc
atgacagtgcttgatgatgacttggaaaccatggaagccatcaaagacgatctggaccga
cttcgcacgaacaaggagctcagtgacgagcagcttgcacgggtggagaaggttgttgaa
gccatctcagttagtttgggtggcgaggaacaagaactggacgaggctcgacgcagtgtc
atgcttgcgccttggaagcacactggttggagtgagcttgctgacgctgctggaggtgac
gtttttgccagtacacttgcaaaggaaactgcgatgcgcaacgcaccgccgaacggtact
ttgagtgctgttggcttggcgggtgctatgggaagtactggcgatgtacgagatgctcag
agggcaattatgctagcaccctggtgcacagatggctggagtgccttggccgagtgtgtt
caaagtgcttga
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