Alternaria dauci: 96081550
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Entry
96081550 CDS
T10615
Symbol
ACET3X_001228
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
adac Alternaria dauci
Pathway
adac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
96081550 (ACET3X_001228)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96081550 (ACET3X_001228)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
96081550 (ACET3X_001228)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
96081550
NCBI-ProteinID:
XP_069311470
LinkDB
All DBs
Position
1:join(3920857..3921527,3921577..3923980,3924033..3924359)
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AA seq
1133 aa
AA seq
DB search
MSLFGNLGGSQPASSGATGGGLFGATTGASGGTTPSLFGNLGGGTSNAQSGTTQAPSTGG
GLFSGLGGAKPAATTTSSSLFAGAASTSQPQTQAQPSSFGGLFNKPASQATTTNNTQQTS
GLGQSSLFGATSTQQQPQQQQQQQQQQQGASLSQANAGTGRSAHFDHLLERGRKRNAGEN
GGNNFDELPSLQLGLGDIARKVRNLGAGGPSADQVQDRSQDRAAHYLLSASGVKMGSTLR
DLNQFSSQAGLAAPGQAQNLFDNDVDGYISNLHSQSTLALIQEGLEQSKRDFDTFLEDNV
QIEWDKQRQRIYEHFGLGRQSEDMAASQSGAFGSTARGAFGRATGRKGRSMGPNSGASVN
GRSTFGASAAGPPVLGASQSVLGGRESTDKSVMGGQPASQDRYVRDKQEKYMDEVKKLNE
SRLRESSFSVLHAFSDVEKAAGTEYSEHFTNAYGALMSITGEKTELEASNPGSNQPRERS
FTKDYLDEQPNSAASVRMRKRILDGSRKFLESKFLEQVEDVLRRNPAEALVGGVPSMLNK
IRGFVRAKAAFKELGADSDLFQRIGEAGDEFPWIIIFFLLRGGLLTEAAEYVREKRNFFQ
NTDRNFQAAITQYATDPERRLNPDTQQKVAHTHAQRTRLKTPEDPYRMACYKIVGRCDMS
QRNLAPIKENMDDWVWLQFNLAREGNRAEENAGEIFGLEELRTTIKDIGQRHFMNDEAES
AGGYGIYFYLATLAGLFEPAINYLYTHNYVSAVHFAVALDYYGLLRVSDWTTAGGEIMTF
TTRQQPQLNFGRIIGHYTSDFRAARADAAADYLVLICMNADLPGEAGRQQAELCHEALRE
LVLETREFSTLLGDVKSNGETTPGLIQERVPLLKLDGEMGLLNTITSEAARMADDNGRIN
DAILLCHLAGEYDSVVTILNRALAEALSVELGQEPLRLEPLKPRLTPAESQQQQQQRSDL
TSSSLSMLGTDDPVELAQKVIALYDANSLWWRKVSQMNRDTVGILFQLNNAKKVIEAGDY
MAALGQIENLRILPLSAGGNVSDIRATANSFNSYPPEISRNIGNVLLWCIGCCSRHRGRL
LSGQFEDRMRKVLADQLLQKAKDLMVFAGLIKYKLPPRVFETLAREGQEVGAF
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttcggcaatcttggaggctcccagcccgcctcttctggcgcaacaggcgga
ggactgtttggggcaacaacgggcgcatcaggcggtactacaccaagcttgtttggcaat
ctgggcggaggcacttcgaatgcgcaatccggtacgacacaagcacccagcactggaggc
ggacttttcagtggcttgggcggagcaaagccggcagcaaccacgacatcctcctcgctg
ttcgctggcgccgcatcgacctcacagccgcaaacgcaagcgcaacccagcagcttcggc
ggactcttcaacaaaccggcatcgcaagcgacaacgaccaacaacacgcaacaaacgagc
ggccttggccaatcctccctcttcggcgctacctccacacagcagcagccccaacagcag
caacagcagcagcagcagcaacagggcgcgtcgctatcccaggcaaacgctggtaccggt
cgctctgcccactttgaccatctgctcgagcgaggacgaaagcgcaatgctggcgaaaat
ggcggtaacaactttgacgaactgccgtccctacagttgggactgggagacatcgcacgc
aaggtgcgcaatctgggtgctggaggtccctcggcagaccaggttcaggatcgctcccag
gatcgcgctgcacactacctgctttccgcctctggcgtgaagatgggcagcaccctccgc
gacctcaaccaattctcttctcaagccggtctggctgcacctggccaggcccagaacctc
ttcgataacgacgtagacggctacatctcgaacctgcactcccaatcaaccctagcactc
attcaagaaggattagagcaatctaaacgcgactttgacaccttcctcgaggacaacgtt
cagattgaatgggacaagcagagacagcggatatacgagcatttcggacttggtcgacag
agtgaagatatggccgcatcccaaagcggcgcattcggcagcacggcccgcggggctttt
ggacgcgcaacagggcgcaagggtcgttctatgggccctaacagcggtgcgtctgtcaac
ggaagatcgacttttggcgcgtctgctgccggcccgcctgtccttggtgcctctcaaagt
gtgcttggtgggcgcgaatctaccgataaatctgtcatgggtgggcaacctgcttctcag
gaccgatacgtgcgcgacaaacaggaaaagtacatggacgaggtcaagaagctcaacgag
tccaggctacgtgagagctccttctcagtactccatgcattctcagacgtagagaaggct
gcgggcaccgagtactcagagcactttacaaacgcgtacggggcgcttatgtcaatcacc
ggcgagaagaccgaactggaggcctccaaccctggctccaaccagccgagagagcgaagt
ttcaccaaagactacttggatgaacaaccaaactctgctgctagcgtgcgcatgcgcaaa
cgcatactcgatggctctcggaagtttttggaaagcaagttcctggagcaagtggaagat
gtgttgcggaggaaccctgcagaggcgcttgtcggtggagttccctccatgctcaacaag
atccgaggctttgtacgagcgaaagctgcattcaaggagctcggtgcagacagtgatctg
ttccagaggataggcgaagctggcgatgagtttccttggattataatattcttcctcctc
aggggtggtctcctcaccgaggctgctgaatatgtacgagagaagagaaacttcttccaa
aacaccgatagaaactttcaggcggcaatcactcagtacgccaccgatcccgagcgaagg
ttgaacccagatacgcaacaaaaggttgcgcatacgcatgcccagaggactcgcttgaag
acgccggaagacccctaccggatggcctgttacaagatcgtcggccggtgtgacatgagc
caacgcaatctagcgccgatcaaagagaacatggacgactgggtatggctgcaattcaat
ctggcccgtgaaggcaaccgcgctgaagagaatgctggcgagatcttcggcttggaagaa
ctgcgaacaaccatcaaggatatcggtcagcgtcacttcatgaacgacgaagccgagtct
gcgggtggttatggaatctacttttatctcgccacccttgctggtctgtttgagccagcg
atcaactacctctacacccacaactacgtctctgcagttcatttcgccgttgctctggac
tactacggcctactgcgcgtgtcggactggacgactgcaggcggagagatcatgaccttc
actacacgacagcagccacagctcaactttgggcgcataatcggccactacactagtgac
ttccgtgccgcacgagctgatgctgcagctgactacttggtgctgatctgcatgaatgcg
gatctaccaggtgaagcaggacgtcaacaggcagagctctgccatgaagcgcttcgtgag
cttgtccttgagacgcgcgagttctctacgttgctgggtgatgtcaagtcaaacggcgag
acgacacctggtctcattcaggaacgtgtgccgttgcttaagctcgatggcgagatgggc
ctgttgaacaccatcaccagcgaagccgcgaggatggcggatgacaacggacgcatcaat
gacgccatcttactctgccaccttgctggcgaatatgacagcgttgtgacaatcttgaac
cgcgcccttgccgaagcactctctgtagagctcggtcaagagccacttcgtctggagccg
ttgaagccacgactgacacccgcggagtcacagcaacagcagcagcaacgaagtgacctg
acgtcgtcgagcttgagcatgcttggaacagatgatcctgtcgaactcgcccaaaaggtt
attgcattgtacgatgcaaacagtctatggtggaggaaggtgtcacagatgaaccgtgat
acggttggaatactattccagctcaacaacgcaaagaaggtcatcgaggctggcgactac
atggcagcactcggccaaatcgaaaaccttcgtatcctccccctgtctgctggaggcaat
gtcagcgacattcgcgctactgccaacagcttcaactcatatccaccagagatttcgcgc
aatattggcaacgtgcttctctggtgcatcggctgctgctcgcgacaccgtgggcgtctg
ctgtctggacagttcgaagacaggatgcgcaaggtacttgcggatcagctgctgcagaaa
gccaaggacctcatggtctttgccgggcttatcaagtacaagctgccaccaagagtgttt
gagacgctggctagggaaggtcaagaagttggtgctttctag
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