Alternaria dauci: 96084982 Help Entry 96084982          CDS       T10615                                  Symbol ACET3X_004660 Name (RefSeq) hypothetical protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism adac  Alternaria dauci Pathway adac03040   Spliceosome adac04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:adac00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     96084982 (ACET3X_004660)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     96084982 (ACET3X_004660)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:adac03041]     96084982 (ACET3X_004660)    04121 Ubiquitin system [BR:adac04121]     96084982 (ACET3X_004660)    03400 DNA repair and recombination proteins [BR:adac03400]     96084982 (ACET3X_004660) Enzymes [BR:adac01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      96084982 (ACET3X_004660) Spliceosome [BR:adac03041]  Complex B   Other components    Prp19 complex     96084982 (ACET3X_004660)  Complex C    Prp19-CDC5 complex     96084982 (ACET3X_004660) Ubiquitin system [BR:adac04121]  Ubiquitin ligases (E3)   U-box type E3    96084982 (ACET3X_004660) DNA repair and recombination proteins [BR:adac03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     96084982 (ACET3X_004660) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR19_1st EIF3I WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd B-prop_COPA_B_2nd Beta-prop_EML Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_HPS5 WD40_Gbeta eIF2A Beta-prop_Vps41 WD40_MABP1-WDR62_2nd WD40_like WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_IFT122_2nd Beta-prop_WDR19_2nd Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 KNTC1_N PEP5_VPS11_N U-box NBCH_WD40 Beta-prop_RSE1_2nd Mcl1_mid Beta-prop_WDR35_TULP_N Beta-prop_At4g14310 Cytochrom_D1 DUF3450 Beta-prop_IFT80_2nd zf-Nse V_ATPase_I_N DUF5711 Emfourin Motif Other DBs NCBI-GeneID:  96084982 NCBI-ProteinID:  XP_069308638 LinkDB All DBs Position 3:join(3127593..3128083,3128143..3129067) Genome browser AA seq 471 aa AA seqDB search MLCAISGEAPREPVASRKSGNVFEKRLIEAHIAEHHTDPVTGEDLATEDLIELKSPNVVT PRAPNFTSIPAMLSAFQNEWDALVLETHTLKQHLAQTRQELSTALYQNDAATRVIARISK ERDEAREALSNVTISGGGQGDAMQVDDQGLPEQLVALVDETQQELFATRRKRPVPADWTS GDAIANYDIAKTTEPLYPGSSKIAVNEAQNVLVGGADGTTGVYSLTQAKVLETFNAGSAV TSVAWWGERALVGTSAGTVKVFSTGDDVAQIGSHAGAVTSMSLHPSGKMLATAGADKRYA IHELTTFKTVSQVYVEAEITCVAFHVDGMLFFVGSSDGNIRIYDIKTGTQMAELATSAPV VDLKFSENGTWFAVVQENSSSVAIWDIRKQAAIHTLESGSPVKSVSWDYTGQFLAIGGIG SVSVQQYTKATKSWAELVRKATPAKDVAWGGKAENVVALTAEGGLAVLTAP NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt atgctctgcgcaatctctggcgaagctccccgcgaacccgttgcctcgcgcaagtcgggc aatgtctttgagaagcgcctcatcgaagcacacatcgccgaacaccacacggaccccgtc acgggcgaggatctcgcgaccgaggacctcatcgagctcaagtcgcccaatgtggtgacg ccgcgcgcgcccaacttcacgtcgatccccgccatgctgagtgccttccagaacgagtgg gatgcgctggtgctcgagacgcacacgctcaagcagcacctggcgcagacgcggcaggag ctgagcactgcgctgtaccagaacgacgcggcgacgagagtaatcgcgcggatatcaaaa gagcgggacgaggcgcgcgaggcactgtccaatgtcaccattagcggaggcggccagggc gacgcgatgcaggtcgatgaccagggcctgcctgagcagctggtagcccttgtggatgag acacagcaagagctcttcgccacccggcgaaagcgacctgtacccgccgactggacctct ggagacgccattgccaactacgacattgccaagacgacggaaccgctatacccaggcagc agcaagattgccgtcaacgaggcgcagaatgtgctggtcgggggcgcagatggcaccacg ggcgtctactcgctgacgcaggccaaggtgctcgagacattcaatgcaggcagcgcagtc acgtcggtggcatggtggggagagcgcgccctcgttggcacatcggcaggcacagtcaag gtattctccaccggcgacgacgttgcgcaaataggatcccacgccggcgccgtcacgtcc atgtcgctccaccccagcggcaagatgctcgccaccgccggcgccgacaagcgctacgcc atccacgaactcacaaccttcaagacggtctcgcaagtctatgtcgaagccgaaatcaca tgcgttgcgttccacgtcgacggcatgctcttcttcgttggcagctccgacggcaacatc cgcatctacgacatcaagacgggcacgcaaatggccgagctcgccacgtcggcgcccgtc gtcgatctcaagttttctgaaaacggaacgtggttcgccgtcgtgcaggaaaactcgtcg agcgtcgccatctgggacattcggaagcaggctgcaatccacacgctcgagtctggcagc ccggtcaagagcgtgagctgggactacactggccagttcttggcgattggtggcattggc agcgtctcggtgcagcagtacaccaaggcgaccaagagctgggccgagctggtcaggaag gcgacgccggcaaaggatgtcgcttggggtggcaaggccgagaatgttgttgcgctgact gccgagggcggtttggcagtgctcacggcgccttag

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