Aquihabitans daechungensis: ACE2AJ_00500
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Entry
ACE2AJ_00500 CDS
T11326
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
adae Aquihabitans daechungensis
Pathway
adae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE2AJ_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adae03021
]
ACE2AJ_00500
03400 DNA repair and recombination proteins [BR:
adae03400
]
ACE2AJ_00500
Enzymes [BR:
adae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE2AJ_00500
Transcription machinery [BR:
adae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE2AJ_00500
DNA repair and recombination proteins [BR:
adae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE2AJ_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
XQO43730
LinkDB
All DBs
Position
109353..112964
Genome browser
AA seq
1203 aa
AA seq
DB search
MSGSGSHRYRPRDRYSFANLADILPLPDLIAIQRESFDWFLEQGLADTFRDISPIKDFTE
TLQLELEFDPNDEDLRPTPKFTVEECKERNMTYSAPIFVRARFINANTGQIKEQTVFMGD
FPKMTTKGTFVINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYSGEWI
EFDVEQKPGKDVTAGTRVARKRRLGIFVLLRALGYDEENAPGFLEAFVRHFDFLEGQWEK
ERDIAPTQEEALVEIYKRTRPGEPPSVESAKAYFRNAFFESRRYDLSRVGRYKLDRKLGH
EIDKIAELFPMVDLDRPEPGQPVLSRCEVLGACTYMLHVVRATPGYRLDDQDHFANRRIR
SVGELIQNQVRIGLSRMERVVRERMATLDLESMTPQTLINIEPVVAAIKEFFGSSELSQF
MDQVNPLSGLTHRRRLSALGPGGLSRERAGFEVRDVHFSHYGRMCPIETPEGPNIGLIGY
LATYARVNEFGFIESPYRRVVDGKVTDEIMYLAADEEEEYVVAQANTPVNPDGSFAEARV
LVRRSPQAASLEDLRLQLERDIFFGATIDIQYVPGSEVQLMDVSPKQIVSVGAALIPFLE
HDDANRALMGANMQKQAVPLVKAEAPYIGTGIESRSARDAADMIIATDDGEILEVDGTLI
KVAYKSQGNVTYKLNKFERSNQDTCINQRPIVEAGQKFSAGDILANGPSTDNGELALGKN
LLVAFMPWEGFNFGDAMVLSERLVKDDVLTSFHIKEHEIAARDTKLGPEEITRDILSLSE
DILADLDERGIIRIGAEVEAGDVLVGKVTPKGETELTPEERLVRALLGDGAREVRDTSLR
LPYGETGKVIDVRVQTREDGHELAKGVNQLVKVYVGQRRKISVGDKLVNRHGGKGVVAKI
LPIEDMPFMADGSPVDIILNPLGVPSRMNVGQVMEAHLGYAARWGWDHDKSGKVGDEPWR
NERKTRPATPPAKLIATPVFDGAFWDEEDRTKHPTIQQILTNLTPESPYEEYGDGGRLIQ
DDGKTTLYNGRTGEPYDNPITVGYMYILKLAHLVDDRIHARSTGPYSMITQQPLGGRAQF
GGQRFGEMEVWALEAYGAAYCLQELLTVKSDDVLGRVKVYEAILKGENIPEPGIPESFKA
LIKEMQALCLNVEVLDADGNEIEMRELDEEVFRTAEELGIDLSRPERGSDKEDERRRAER
AAR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctccggtagccatcggtaccgaccccgggatcgctactcgttcgcgaacctg
gcagacattctcccgcttccggacctcatcgccatccagcgtgagtccttcgactggttc
ttggagcagggtctggcggacacgttccgcgacatctcgcccatcaaggacttcacggag
accttgcagctcgagctcgagttcgacccgaacgacgaggacctgcgccccacccccaag
ttcacggtggaggagtgcaaggagcggaacatgacctactccgcaccgatcttcgtgcgg
gcccggttcatcaacgccaacaccggtcagatcaaggagcagacggtcttcatgggggac
ttccccaagatgaccacgaagggcaccttcgtcatcaacggcaccgagcgcgtcgtcgtg
tcgcagctcgtccgctcgcccggcgtgatcttccagcccggtgagcggttccgcctgcgc
aacctggccaagcaccagctcgtcaccggaaccatccacccctacagcggcgagtggatc
gagttcgacgtcgagcagaagcccggcaaggacgtcaccgccggcacccgcgtcgcccgc
aagcgccgcctcggcatcttcgtgctgctgcgggccctcggctacgacgaggagaacgcc
ccgggcttcctggaggcgttcgtccgccacttcgacttcctcgagggccagtgggagaag
gagcgcgacatcgcgcccacccaggaagaggcgctggtcgagatctacaagcgcacccgc
cccggtgagccgccgtcggtcgagtcggccaaggcctacttccgcaacgcgttcttcgag
tcccgccgctacgacctcagccgcgtcgggcgctacaagctcgaccgcaagctcggccac
gagatcgacaagatcgccgagctgttcccgatggtggacctcgaccgcccggagccgggc
cagccggtgttgagccgttgcgaggtcctcggggcgtgcacctacatgctgcacgtcgtc
cgggcgacccccgggtaccgcctcgatgatcaggaccacttcgccaaccgccgcatccgg
tcggtgggcgagctcatccagaaccaggtccgcatcggcctctcccgcatggagcgggtg
gtgcgcgagcgtatggccaccctggatctcgagtcgatgaccccgcagactctgatcaac
atcgagcccgtggtcgcggccatcaaggagtttttcgggagctcagagctgtcgcagttc
atggaccaggtgaacccgttgtcggggctcacccaccgtcgccgcctctcggcgctcggc
ccgggtggcctctcgcgcgagcgggccggcttcgaggtccgcgacgtgcacttcagccac
tacggccgcatgtgcccgatcgagacgccggaaggcccgaatatcggcctgatcggctat
ctggccacctacgcgcgggtcaacgagttcggcttcatcgagtcgccgtaccgccgggtg
gtcgacggcaaggtcaccgacgagatcatgtacctcgctgcggatgaggaggaggagtac
gtcgtcgcccaggccaacacgccggtgaaccccgacggctcgttcgccgaggcacgcgtg
ctcgtgcgccgttcgccgcaggccgcatccctcgaggacctgcgcctccagctggagcgg
gacatcttcttcggtgccaccatcgacatccagtacgtgcccggcagcgaggtccagctc
atggacgtctcgccgaagcagatcgtctcggtcggcgcggccctcatcccgttcctcgag
cacgacgacgccaaccgcgcgctcatgggcgccaacatgcagaagcaggccgtgccgctc
gtcaaggccgaggcgccctacatcggcaccggtatcgagagccgctccgcccgcgacgcc
gcggacatgatcatcgccaccgacgacggggagatcctcgaggtcgacggcacgctcatc
aaggtggcgtacaagtcccagggcaacgtcacctacaagctcaacaagttcgagcgatcc
aaccaggacacctgcatcaaccagcggccgatcgtcgaggccggccagaagttcagcgcc
ggggacatcttggccaacggtcccagcaccgacaacggcgagctggcgctgggcaagaac
ctcctcgtggcgttcatgccctgggagggtttcaacttcggtgatgcgatggtcctgtcg
gagcgcctggtgaaggacgacgtgctcacgtcgttccacatcaaggagcacgagatcgct
gcccgcgacaccaagctcggcccggaggagatcacgcgggacatcctgagcctgagcgag
gacatcctcgccgacctcgacgagcgcgggatcatccgcatcggcgccgaggtggaggcc
ggagacgtgctggtcggcaaggtgacgcccaagggcgagaccgagctcacgcccgaggag
cgcctggtgcgcgccctgctcggcgacggggcacgtgaggtgcgcgacacgtccctgagg
ttgccctacggcgagaccggcaaggtcatcgacgtccgggtccagacccgcgaggacggc
cacgagctggccaagggtgtcaaccagttggtgaaggtctacgtcggtcagcgccgcaag
atcagcgtgggcgacaagcttgtcaaccgacacggtgggaaaggggtggtggcgaagatc
ctcccgatcgaggacatgccgttcatggccgacggcagtcccgtcgacatcatcttgaac
cccctgggcgtcccgtcccgcatgaacgtgggccaggtcatggaggcccacctgggttat
gccgcccgctggggctgggaccacgacaagtcgggcaaggtcggtgacgagccgtggcgc
aacgagcgcaagacccggcccgccaccccgccggccaagctcatcgccaccccggtgttc
gacggcgcgttctgggatgaagaggaccgcaccaagcaccccaccatccagcagatcctc
accaacctgaccccggagtccccctacgaggagtacggcgacggcggccgcctgatccag
gacgacggcaagaccaccctctacaacggtcgcaccggtgagccctacgacaacccgatc
accgtcgggtacatgtacatcttgaagcttgcgcacctcgtggacgacaggatccacgcc
cggtccaccggcccctactcgatgatcacgcagcagcccctgggcggcagggcccagttc
ggtggccagcgcttcggggagatggaggtgtgggccctcgaggcctacggcgccgcctac
tgcctgcaggaactgctcaccgtcaagtctgatgacgtcctcggccgcgtcaaggtctat
gaggccatcctcaagggcgagaacatccccgagcccggcatccccgagtccttcaaggcg
ctcatcaaggagatgcaggccctgtgcctcaacgtcgaggtcctggacgccgacggcaac
gagatcgagatgcgggaactcgacgaagaggtcttccgcacggcagaggaactcggcatc
gacctctcccggccagagcgtggctccgacaaagaggacgagcgtcgccgggccgagcgg
gccgcccgctga
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