Acropora digitifera (stony coral): 107347502
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Entry
107347502 CDS
T04352
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04512
ECM-receptor interaction
adf04518
Integrin signaling
adf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107347502
04518 Integrin signaling
107347502
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107347502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
adf04147
]
107347502
00536 Glycosaminoglycan binding proteins [BR:
adf00536
]
107347502
Exosome [BR:
adf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107347502
Glycosaminoglycan binding proteins [BR:
adf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107347502
Hyaluronan
Extracellular matrix or blood plasma proteins
107347502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
WAP
Motif
Other DBs
NCBI-GeneID:
107347502
NCBI-ProteinID:
XP_015768940
LinkDB
All DBs
Position
Un
AA seq
1504 aa
AA seq
DB search
MKMVLSGGDRNFSPMSLLTVSFLIMAVLAPKIVQSVGCPEFPKQLSLNCAPHSSLDQCKF
DGDCTESKDHMCCLIGCQKMCLDPALIQLSIGGSVVCPVLPRPSSCPDQPNECSVESECS
VGQKCCSDGCRMVCADPVAKPTTQPPSIDPWKSCNTSVDLAFIIDSSGSISRRNYVKVKN
FVKYVARGFGISPSESRAGIVLYSTDASIKAQFDQYTSNEDFVKAVDGLPHRRQLTYIDR
ALRLAASQLFPSARKDVPKIALLMTDGKQTDPRGVVNLREASAPLRKQGVRVLAFGVGKN
VNVRELRLTVERDEDVISVSNFDDLISKVRTYTANLCAAAETEPIYPDADIAFLVDSSSG
VSFQQFEMEKRFVKSMARDFVVSPLGPRAALVSYSATSNTVIGFSGYSSNVDFSRQINNA
RFMGGKRKIDQALIHTASLFRKTGRVGLRIVILLTAGNYYTGPGSRSMSSVMSLMNSLDA
HVYVIGIGPFFTKSLFTPMVRGPGDIFWIPSFNDLAPRQSRIARYLRLSANAFTYERAHW
SADVIFLMDSSKYVTGDNYILEKNFVKLMARLLNLASNRSRAALLTFSDNAQLVINFDGY
EDRAAFDAAVNTAPHQKGDRLIDNAFDSATGILRTDSRATVPKYVILLTTGKPTLRSNSR
SLVNASSNVWSNGGKVFVVAVLTGGYTISEFYPAVQRPEDAFSVSSFDALLSEAPTIAAR
MMASWRAPVSKTFSADIAFIVDSSSSVSPFQYSRVKQFVGILSEYLNVEPGRSRGAFVTF
GEAPVEVFNFDSYKLLSEYKTKVNEAPYLGSERTISSALSAAGILFSNARGAHPWIAILV
TSWRPYEIHGARSLEILARPLLSRGVWLYVLSIGENPYVGWLTPMLVEPRDAFSIISYRD
LPGNIGPVGRHIVNDNFLFGHASFQVDIIFLMDSSLGVNSQNYEIEKRFVQRIAMHLGVF
TGRSRAALVAYGGNSWVVFGFGGYHSNADFELRLNEALMFGGVRRVDRALDTAAALMLGA
RPTVPKAVMLIMTGDPSWEADAMPITDSARPLRDLGAWLYVVAVGQTDPSELQKATIRPT
DIYFAMSFSSLYGYISPVAKYIANTSVITGISQLNADIVFIVDCSSDVPYREYSTQKTFV
RSLTQYLNIQPDRSRAALIVYGSRALTAVRLERSGTFGSELTKAPFLAGRRRFDSALSAA
STVFENARENVPKIMMLFMAGKQAQVRGATSLKDAIEPLRQEGVTTFIFRIGLEPDLKEL
VPVVDSPENIFTFARFADMDARVPYVARQIPFNSALLGSITFAIEIVYILDSSDTVTLDQ
YKDEKTFVLYLARYLKMVPSHSRNAVISYGSSAIVVTDLGQADTIQAFDLAVNNASKIGG
QRRMDLAIDTARTVLSNARAAIPKVVILLTTGSQPTGIKAGVLESSMQRLYEMGARLYAV
SINAPTVNLPLKNTDGSDWFPVRSFMDLPIFCFLASCIYPILVEPDLLWNVMANGPTVVQ
IKYL
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggttttatctggaggagacaggaatttctctccaatgtcattgctgacagtg
tccttcttgattatggctgttcttgcaccgaagatcgtgcagagtgttggatgtccggag
tttcctaaacagctgtcgctgaactgtgccccgcattccagtttggatcagtgtaaattt
gatggggactgcactgagtccaaagatcacatgtgctgtttgattggctgtcaaaagatg
tgcttggatccagcactcatccagttgtccattgggggatcagttgtgtgtcctgtatta
ccaagaccttcatcatgcccagaccaaccaaatgagtgtagtgttgagagtgagtgcagt
gttggccagaagtgctgttctgatggatgtaggatggtttgtgctgatcctgtcgctaag
ccaacaacacagccaccaagtatagatccttggaaaagctgcaatacaagtgtggacctg
gcctttataatagattcatcaggaagcatttcaagaaggaattacgtgaaagtaaaaaac
ttcgttaagtacgttgcgagaggcttcgggatttcaccttcggaaagccgagctggcatc
gttttgtacagcactgatgcttctatcaaagctcagtttgaccagtacacaagcaatgag
gattttgttaaagctgtcgatggccttcctcatagaagacaattaacgtatatagaccgc
gccctcagattggctgcttcgcagctttttccaagcgcgcgaaaggacgtgccaaagatt
gcattgctaatgacagacggcaaacaaacggatcctagaggagtggttaatcttagagaa
gcttctgcgcctcttcgaaagcagggagtccgtgtgcttgcctttggtgttggaaagaac
gtgaacgtgagagaactgagactgactgtggaacgagatgaagacgtcatatctgtgtca
aactttgatgatttgataagcaaagttaggacttacactgcaaatctttgtgcagctgct
gaaacggagcccatttatcctgatgcggatattgccttcctcgtggattcttcgtctggt
gtatcttttcaacaatttgaaatggagaaacggttcgtaaaaagtatggcccgagacttc
gtcgtctctccgcttggccctcgggctgcactcgtcagttactcggcgacgtctaacacc
gtcatcggcttttctggttacagcagcaacgtcgactttagtcgtcaaatcaacaatgct
cggttcatgggaggaaagcgaaaaattgaccaggccttaattcacactgcttcattgttt
cgaaaaactggacgtgttggcttgcggattgtcatcttattaactgccgggaattattac
acaggaccagggtcgaggtccatgtcgtctgtcatgtcattgatgaatagcctcgatgcc
catgtttacgtaattggcattggccctttttttacgaaatccctgttcactcccatggtt
cgtgggcctggtgatatattttggataccttcattcaacgatctggcacctcggcaatcg
cggatcgctagatatctaagactgtctgccaacgcttttacatacgaacgcgctcattgg
agcgccgacgtgatatttctgatggattcttcaaaatacgtcacaggcgacaattacatc
ttagagaagaactttgtgaagctaatggcgcggcttttgaacctcgccagcaacagaagc
cgcgcggcgcttttgacctttagcgacaatgcacaactagttatcaacttcgatggctac
gaagaccgtgcagcttttgacgctgccgtcaacacggcgcctcatcagaaaggggatcgt
ttaattgataacgcatttgactctgcgactggaatactgcggacagattctcgagcaact
gtaccaaagtacgtcatccttttgacaactgggaaaccgacacttcggtctaactcacgt
tctttagtcaatgcctcgagcaatgtctggtcgaatggtggcaaggtattcgtcgtggct
gtcctaacgggaggctacacgatcagtgaattctatccagccgtccagaggccagaggat
gcattctcagtatcgtcctttgatgccctgctttcagaagcgcctactatagcagcacga
atgatggcatcatggcgagccccagtaagcaagacattttctgctgacatagccttcatc
gtggactcctcgtcgtcagtgtctccgtttcagtattcacgcgtaaaacagtttgtagga
attctctctgagtacctgaacgttgaacccggacgttccagaggtgcctttgtcacgttt
ggcgaggcccctgtggaagtgttcaacttcgactcgtacaaactactctcagagtacaaa
acaaaagtcaacgaggctccttacttaggaagtgagcgcacaattagcagcgccttgagt
gcagcgggcattcttttttctaatgcgcgcggtgcgcacccgtggatagcaattctagtg
acgtcatggagaccatatgagatccatggcgccaggagtcttgaaatcctggctcgtcct
ttgttgagccgaggggtgtggctgtacgtcctctcgattggtgagaacccgtatgttggc
tggctgactccaatgcttgtggaaccaagagatgctttctcaatcatttcctatcgcgac
cttcctggaaatattggacctgttggcagacacatagtaaatgacaattttctcttcggc
cacgcgtcgttccaagttgatattatattcctaatggattcttcgttgggcgtaaactct
cagaactacgagattgagaaacgtttcgttcaacggatcgcaatgcatcttggtgttttc
accgggcgatcacgtgctgctctcgttgcgtacggaggaaattcgtgggtcgttttcggc
tttggtggctaccattcaaacgccgactttgaacttcgcttgaacgaagccctgatgttt
ggaggtgttcgacgagtggaccgagcattagacacggcagctgcgctgatgttgggcgct
cgaccaacggtgccgaaagcggtcatgcttattatgacaggagatccgagctgggaggct
gatgccatgccaattacggattcggctcgtccgctgcgtgatttgggagcgtggctgtat
gtcgttgctgttggacaaactgatccaagtgaactccaaaaggccactattagacctaca
gatatttattttgccatgtcgttttctagtctttatggatatatatcaccagtggcaaaa
tacattgccaacacctcagtgataacaggaatctcccaattgaacgctgacatcgttttc
atagtcgactgctcatcagatgttccataccgcgagtacagcacacaaaagacatttgtt
cggtccctaacccagtatctaaacatccagcccgaccgatcacgagcagctttgatagtt
tacggaagccgagccctcactgcagttcgtttggaaaggtcaggaacgttcggctccgag
ttgaccaaagcacctttcctcgcaggaaggcgaaggttcgatagcgcactcagtgccgca
agtacagtgtttgaaaatgcgcgggaaaatgtaccaaagatcatgatgctgttcatggcg
ggaaaacaagcgcaagtcagaggtgccacctcactgaaagatgcaattgaaccgcttcga
caagaaggagtgacgactttcatttttcgcattggtttagagcctgatttaaaggaacta
gttccagttgttgacagtcctgagaacattttcacattcgccagatttgctgacatggat
gcgagagttccttacgttgccaggcaaataccattcaactccgctctcctcggaagcatt
acctttgctattgagattgtttacatcctcgattcatccgatacagtcacgctcgaccaa
tacaaagacgaaaagacgtttgtcttatatcttgcccgctatttaaaaatggttccgtct
cactctagaaacgctgtcatatcatatggctcctctgcgatagtggtaacggacctaggt
caagcggatacgattcaagctttcgacctggcggtcaacaacgcttcaaagataggagga
cagcggcgaatggaccttgcaattgacacggcgcgaaccgttttaagtaatgcgcgagct
gcaattcccaaagttgttattcttcttaccactggaagccaaccaacgggaattaaagca
ggcgtcttagagtcttcaatgcagcggctctatgaaatgggagctcgattgtatgcagtc
tccatcaacgcaccgactgtcaatttaccacttaagaatacagatggttctgattggttc
cctgtgaggtcttttatggatttgccaattttttgttttctcgcttcttgtatctatccc
attttagtcgaaccagatcttttgtggaatgtaatggcgaatggacccacagtcgttcaa
attaaatatctttaa
DBGET
integrated database retrieval system