Acropora digitifera (stony coral): 107348165
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Entry
107348165 CDS
T04352
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107348165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107348165
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107348165
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107348165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_HEAT
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
107348165
NCBI-ProteinID:
XP_015769665
LinkDB
All DBs
Position
Un
AA seq
2443 aa
AA seq
DB search
MSSCVDSLSLALGQISFAVNDLTKKNYKATIKEVHELIEKHGYEAEHHLFRCLFSFIDFT
GDGKNNGKDFLQCQFLIQECQMLVSKPNFSSILCSAIETPEHKQRTLRPSSQLLPNMSRV
LKLNKVQEVIFGLSLLNSSNQDLKNHAGQFVKHKLPDLLRSYIDADVGGVQEGGLTDVAI
EVLHRLLTHVVHGPRDQVGVGDDQVTAFLETLKKDFPKEHVPVVLSPLLYPDLQDISPDN
LIPETSVFSKTVMEDDLADFIGEIGYSSCSSVDECKNTLIQFGVQDITPSSVARVIGMMV
KTMYDLGEDVPIQNYGSSSASMDKLGLGELTPGPVTWNVEVFVQALKETVPLLSWRQVIQ
ELDYPEFHVPSREGLQLLFTACHRGLMEIFPVDVLYRTWTNTEGQLSWIQQILSNPDVFC
FTDYPCHTVVIDLLKTAPEDDNRETAPCFKFPTVVVSGIPGQSASIRQLVMQAMAEWYSK
GDMDQGRLSRILDVAQDLKALSMLLNGSPFVFVIDLAALASRREYLKLDKWLKDKLKEHQ
EEFAQACVVFLRRRCPHLLGVSLDKELPKSVQLPQETVVTMLSCLQSFLGWAKCLWTTVL
LFSLFLCQGQSASIRQLVMQAMAEWYSKGDMDQGRLSRILDVAQDLKALSMLLNGSPFVF
VIDLAALASRREYLKLDKWLKDKLKEHQEEFAQACVVFLRRRCPHLLGVSLDKELPKSVQ
LPQETVVTMLSCLQSFLGXLDALTGLNIPTSSLPPTPATPTSQLPSFPPHPLTGTVLGPS
GGLEAVGTIGSVLSSKAAVQKPPSQLGQLPLSTPTATSSSGLQSPSFSSSQTPWLQQFHQ
SGSLAQSMGGSTMDNARLLAGLGIQKQLSGNSLLQQQQSPQQQTALLSQPRNPADKLRTV
STADVSQVWPGMDQTFTKEVEDEANSYFQRIYNHPPNPTISIDEVLEMLKKFKDSPVKKE
RDIFLCMLRNLFEEYRFFPQYPDKELHTTACLFGGIIEQGLVTYMALGIALRYVLEALRK
AFASKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFEEFPPSLIEYIKYGQQSREPLLG
GRTIQEPLTSRLLSRAPPTLSSASVSSTFTSTAASRSVPFGPNTPLGTSVPLTPSIPLVP
SISSTSTSVSSAKSTSVPDIVPASSPVRGREPSIATANNIDTLLGATETSEIVQPPEPVQ
DKVHFIFNNISQTNLHQKAEELRSLIQAEHILWVTQYLVMKRASIEPNFHQLYLEFMESV
ELTNFAKEVLKETYRNIKVLLQSDKVPANFSDRSLLKNLGHWLGLQTLARNKPILMKDLD
VKSLIIEAYFKGQQEMLYVVPFVAKVIESSAKSKVFKPPNPWVMAIMSVLVELHQMPDLK
LNLKFEVEVLCNTLSLEMKEMKASELLKDPERLKHIPHQLSSPEKEKQAAVSNTSTPTPT
GSSQQGQPPVAPPPPQYAYQEINVASLAGLAPHIQINGQQDFALDPEESRMRAAAHHMVR
FMTAGMALITCREPLLISISNNLRSNFLAALRGANQQQKDMIERAASLVSEENTELACAF
IQKTAVEKALPEMDKRLTTEFDLRRIARSEGRRYCDPVVLTYQAERMPEQIRLKVGGVNA
NQTAVYEEFARSIPGFQPPQAGESITTPPLPKPVGILGNAEAFMPDEVVQILNKCAAEIE
QHLHAIIAPQTNQHVVTIHSLLDTLVQARISRDNMAALRLLHKAVEGLLEGVGPLANDAE
LSLRYRDCHLIVLRGLQDPRGYGIMWTARHVTKFVCECPAELKFNVEAIDLLIRSHLLNM
REFDLHLVQCIDNGHNLQALHFAIQLAKYVSDDKQSSHVTENDLYHTIEALTRIAHSRQN
SEGLSSLLDSSHNGPISSQTVSSHHEMGDNKAPGGPTSLTSGVSSGVGVTYNDDPPGLHE
KVEYLLREWVRLCHQPGAGKESEKAFSTFVSLLHQQGILRTDELITRFFRISTELCVEVT
YRALADHPNSPTTARAKCYNTLDAYCRLIALLVRHSGDASNNVTKINLLSRVLGTVATVL
FQDHEIRHAEFQQLPYHRIFIMLLVELNQPEPILEAINFQVLQTFSTVFHALRPSRAPGF
AYAWLELISHRLLMSKLLLNTPQQKGWVLFQQLLIDLFKFLAPFLRNAELAKQTHLLYKG
TLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDL
LTDIAHSPRILTNFASAIQPASFKKDLDSYLKTRAPVTFLTELRSHLQVSNEPGTRYNVP
LMNALVLYVGTQAITYIHSKSGTPSMSTITHSSHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCVLLYLFAEANTESIQEQITRVLLERLIVNRPHPWGLLITFIELIKNH
QYKFWTHEFVHCAPEIEKLFESVARSCMQQKQAPPRETNENRE
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgtgtagactctctgtccttggcactaggacaaatcagttttgcagtcaat
gatttgacgaagaagaactataaagctaccataaaggaagtacatgagcttattgaaaaa
catggttacgaagcagagcatcacttattccgttgtttgttttccttcattgactttact
ggtgatggaaaaaataatggcaaagacttccttcagtgccagtttctcattcaagaatgt
caaatgcttgtctccaaacccaatttttcatctattctgtgttcagccattgaaacacca
gagcataagcaacgtacactgagaccttcatctcaattgctccctaatatgagcagggtt
ttgaagctcaacaaagtccaagaggttatctttggtcttagccttcttaattcttcaaac
caagatctgaaaaatcatgctggccaatttgtaaaacacaaattacccgatctcttgagg
tcatacatagatgcagatgttggaggtgtacaggaaggagggttaactgatgttgctatt
gaagtattgcatcggcttcttacacatgtggttcatggcccaagggatcaagttggggtg
ggagatgatcaagttactgcctttttggaaacattgaagaaagattttcctaaggaacat
gttcctgttgtactttcaccacttctgtacccagacttgcaagatatttcacctgacaat
cttattccagaaacatctgttttttccaaaactgtgatggaagatgatttagctgacttt
attggtgaaataggttattctagttgttcaagtgttgatgaatgtaaaaatactctcatt
cagtttggtgttcaagatataactccatcatcagtagcaagagtcattggaatgatggtc
aaaacgatgtatgaccttggtgaagatgtcccaattcaaaactatggcagcagctctgct
tccatggacaaacttggtcttggtgaactcactccaggacctgtaacatggaatgtggaa
gtctttgtccaagctttgaaagagacggttccccttctttcgtggcgacaagttattcaa
gagttggattatcctgaatttcatgtccctagccgggaaggactccagctgttatttacc
gcttgtcaccgtggtttgatggagatttttcctgtggatgtgttgtacaggacgtggact
aacactgaaggccagttgtcatggatccaacaaatcctatccaatccagatgtgttttgc
tttactgattacccatgtcacacagtagtgattgatctgctgaagacagcaccagaggat
gataacagagagacagccccatgctttaaatttcccactgtggttgtgtcaggaatacct
ggccagtcagcatcaattcgtcaacttgttatgcaggctatggctgaatggtattcaaag
ggcgacatggatcaaggaaggttgtcaagaatactagatgtggctcaagacctaaaggca
ctgtccatgttattgaatggctccccgtttgtgtttgtgattgaccttgctgcccttgca
tctcgacgagaatatctaaagttggacaagtggttgaaggacaaactaaaagaacatcag
gaggaatttgcccaagcatgtgttgtctttctgcgacgccgttgtccccatttattgggt
gtgtccttggacaaagaacttccaaagagtgttcagttaccacaggaaacagttgttact
atgctttcctgtttgcagtcatttttgggttgggctaagtgtctgtggaccactgtcttg
ctgttctctctcttcctttgccagggccagtcagcgtcaattcgtcaacttgttatgcag
gctatggctgaatggtattcaaagggcgacatggatcaaggaaggctgtcaagaatacta
gatgtggctcaagacctaaaggcactgtccatgttattgaatggctccccgtttgtgttt
gtgattgaccttgctgcccttgcatctcggcgagaatatctaaagttggacaagtggttg
aaggacaaactaaaagaacatcaggaggaatttgcccaagcatgtgttgtctttctgcga
cgccgttgtccccatttattgggtgtgtccttggacaaagaacttccaaagagtgttcag
ttgccacaggaaacagttgttactatgctttcctgtttgcagtcatttttggggtaactt
gatgcactcacagggcttaacattcctacgtcatctcttccacccacacctgcaactccc
acatctcagctgccatcatttccaccccaccccctaactggtaccgtactgggaccctca
ggagggctagaagctgtaggcaccattggttcagttctctcatcaaaggctgcagtgcag
aaacccccatctcaactggggcagcttcctctcagcacaccaactgcgacttcaagttct
ggtcttcaatcgccaagctttagttcctcacagacaccctggttacaacagtttcaccaa
tcaggtagtctagcacagtctatgggaggatcaacaatggataatgcaaggttgttagct
ggtctaggaattcaaaaacagctcagtggaaattccttattgcagcagcagcaatcacca
cagcagcaaacagcactcttgtcccaaccaaggaatccagctgataaattgcgcactgtt
tcaacagcagatgtttctcaggtctggccaggtatggaccagactttcacaaaggaggta
gaagatgaagcaaactcttactttcaaaggatttacaatcatcctccaaatccaactatc
agcattgatgaagtgttggaaatgctcaagaagtttaaagattcacctgtcaagaaggag
agagatatatttctttgcatgcttcgaaacctgtttgaagagtaccgcttcttccctcag
tacccagacaaggagcttcacacaacagcttgcttatttggtggtataattgagcaaggc
ttagtgacatacatggcgcttggaattgcacttcgctatgttttggaagcactgaggaaa
gcttttgcttccaagatgtacatgtttggaattgctgccttggacagattcaagacaagg
ctcaaagactatcctcactactgccagcatcttgcatcgattccacactttgaagagttt
ccaccatccttgatagaatacatcaagtatggacagcaatcaagggaaccactgcttgga
ggaaggaccattcaggagcccctaacatcaagacttctaagccgagcgccaccaacacta
tccagtgcttctgtcagctcaacttttaccagcactgcagccagcagatcagttcctttt
ggtcctaatactcccttgggaacctctgttcctctgacaccttccatacctttggttccc
agtatcagctcaaccagcacctctgtctcctctgccaaatctacatctgtgccagacata
gttccagcctcgtcaccagttagaggcagggaaccatccattgcaacagcaaataacatt
gatacacttctgggtgcaacagaaacaagtgaaatagttcaaccaccagaacctgtgcag
gataaagtgcacttcatctttaacaacatatcgcaaacaaatttgcatcaaaaggctgaa
gaactccgcagtttgatccaagctgagcacattttgtgggtgacacagtaccttgtcatg
aagagagcctctatagaacccaacttccatcaactgtacttggagtttatggaatcagta
gaattgacaaactttgcaaaggaagtgctgaaggaaacgtaccgaaacatcaaggtgctt
ctgcaatctgataaggttccagccaatttctctgatcgatcattgctgaagaatcttggc
cattggctaggattgcagactttggcaagaaataaaccaatccttatgaaggatcttgat
gttaagtctttgatcattgaagcttatttcaaggggcaacaggaaatgctgtatgtggtt
ccatttgttgctaaagtcatagaatcatcagctaagagcaaggtgttcaagccacccaat
ccctgggttatggccatcatgtctgtgctagtagaactgcatcaaatgccagatttaaag
ctgaatctcaagtttgaagtggaggtgctttgtaatacactgtctctagaaatgaaggaa
atgaaagcctcagaacttttaaaggatcccgagagattaaaacacatcccgcaccaactg
tcgtctcctgaaaaagaaaagcaagctgctgtcagtaacacctccacccctacccccaca
ggatcatctcaacaaggacagcctccagttgcgcctccacccccacaatatgcgtatcaa
gaaatcaacgtagcctctttggctggtttggcacctcacatccaaatcaatggacagcag
gattttgcgcttgaccctgaagagtctcggatgagagctgcagcacatcacatggttcgt
ttcatgacagcaggcatggcgttgatcacgtgtcgagagccgctactgatcagtattagc
aataatctcagatcaaacttcctcgctgctctcaggggtgcaaaccagcagcagaaagac
atgattgaacgtgcagcatcgttggttagcgaggaaaatacagaactggcctgcgctttc
attcagaaaacggctgtggaaaaggctttgccagagatggacaaacgattaaccacggag
ttcgatcttcgtcgcattgctcgcagcgagggccgccgatactgtgatccagtggtgttg
acttaccaagcagagcgcatgcctgaacagattcgattgaaggtcggaggagtaaatgcc
aatcagacggctgtctacgaagagtttgcccggagcatacccgggttccaacccccacaa
gcaggagaatcaatcaccaccccacccctgcccaaaccagtgggaatacttggcaatgct
gaggcctttatgccagatgaagtggtacaaattttaaataagtgcgcagcggaaattgag
cagcatcttcacgccattattgcgccacaaaccaatcagcacgtagtcaccatacacagc
ctgctggacactttggtgcaggcgcgcatatcaagagacaacatggctgcacttcggctt
ttacacaaggcagtggaaggtttgctggagggtgttggcccgttagcaaatgacgcagaa
ttgtcactaagataccgcgattgtcatctcatcgtgctaagaggtctccaggacccacgg
ggctacggaatcatgtggacagcaagacacgtgaccaagttcgtgtgtgaatgccctgcg
gagctgaagtttaacgtggaagctattgatctgttgattcgcagtcatttgttaaacatg
agagagtttgatcttcaccttgttcagtgcattgataacggtcacaaccttcaagcgtta
cactttgctattcagttggcgaagtatgtgtcagatgacaagcagagttctcatgtcaca
gagaacgatctgtaccatacaattgaagcattgacaagaatagctcacagcaggcaaaat
tctgaaggactgtcgtcgctcctagactccagtcacaatggtcccatttcatcgcagact
gtgagttcgcatcatgagatgggtgataacaaggctcctggaggccccacatccctaacg
tccggtgtgtcctcaggcgttggtgttacatacaatgacgatccaccggggctgcacgaa
aaggttgagtatttgttgagagaatgggttcgcctttgtcaccaaccgggagcaggaaag
gaaagcgagaaagcattttccacgtttgtgtccctgttacaccagcaagggattctgcga
acggatgagctgatcacgaggttctttcgcataagcaccgaattgtgtgtagaagtaact
taccgagctctggcagaccacccgaacagcccaaccacagcacgagccaaatgttacaac
actctagacgcctattgtcggttgattgcacttctggtgcgccactcaggcgatgcatcg
aataatgtcaccaagataaacctcttaagcagggttcttggaacagttgcaacggtgtta
ttccaggatcacgagattcgccacgcggagttccaacagctgccatatcaccgtatattt
attatgctattggtcgaactaaaccaacccgagccgatcctggaggcaatcaatttccag
gtgttgcagacattcagtactgtgtttcatgcacttcgtccgtcgcgggctccaggcttt
gcctacgcttggctagagttgatatctcatcgattgctcatgtccaagcttctactcaac
acaccgcagcagaagggatgggttttgttccagcagctgttgattgacctgttcaagttt
ttggcgccgtttttgcgcaacgctgaactggctaagcaaactcacctgctttacaaggga
acattgcgggtcttgctggtgcttcttcatgactttccagagtttctttgcgattatcac
ttcagtttctgtgacgtcatacctccaaactgtatccagatgagaaatctgatcctaagt
gcctttcctcggaacatgaggctaccagacccctttacaccaaacttaaaggttgatttg
ttgacggacatcgcgcattctcctcgtatcctgaccaattttgcctcggcaatccagcca
gctagctttaaaaaggatcttgattcgtatctgaagacacgcgcgccggtgacattcttg
acagagctcaggtctcatttgcaggtatccaatgaaccaggaacccgctataacgtaccc
ttgatgaatgcattggtgctttacgttggtacccaggccatcacctacatacacagtaag
agtggtacaccctccatgtccactatcactcattcttcccacatggacatcttccaaaat
ttagccgtggacctggataccgaaggccgatacctattcttgaacgctattgcaaaccag
ctgcggtatccgaatagccacacgcactacttcagctgtgttctgctgtacttgtttgct
gaagccaacacagaatccattcaagaacagatcacaagggttttgctggagcgattgatc
gttaacagacctcatccatggggtcttttgatcacattcatcgagcttatcaagaaccac
caatacaagttttggacgcacgagtttgttcactgcgctccggagattgaaaagttgttc
gagtcagtagcgcgcagttgcatgcagcagaaacaggcgccaccgcgagaaacaaatgaa
aacagagagtga
DBGET
integrated database retrieval system
