KEGG   Acropora digitifera (stony coral): 107356364
Entry
107356364         CDS       T04352                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107356364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adf03041]
    107356364
   03036 Chromosome and associated proteins [BR:adf03036]
    107356364
Spliceosome [BR:adf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107356364
 Complex B
    107356364
 Complex C
   U2 SnRNP specific factors
    107356364
Chromosome and associated proteins [BR:adf03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107356364
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N TPR_DNAAF5 HEAT_GCN1 HEAT_ECM29 HEAT_EZ TPR_IPO5 HEAT_MROH2B_C HEAT_EF3_N HEAT_2 XMAP215_CLASP_TOG VPS15-like_hel Htt_N-HEAT_1 UNC45-central
Other DBs
NCBI-GeneID: 107356364
NCBI-ProteinID: XP_015778468
LinkDB
Position
Un
AA seq 1516 aa
MHPSRNGYTAPAALLNDIAHSGEHVDPFDQHRQPTIAEREDEYRARRRQMVISPPRHDPF
ADGRCQWYYYLIRLLDHTIIIAQFACLGLQAEIFRHVRDQAASGELQKTKEAAAAAAKPE
RKRRRWDQQASGEETPVKKKSSSWDQAEISTPSASRWDETPGRPKGSETPGVTPHRPGSE
TPGATPSTRIWESTPGHVTPGHATPSATPGGNCSRSQPKFTKSNFFKKLFFFFFSSEGET
PGHATPGWAETPRTDRTGAETPGATPTPGSKRRSRWDETPASQMGGTTPMIGTSGVTPAG
AAAMQMQTPTPGQMAMTPEQMQAYRWEREIDERNRYLSDDELDSLFPKEGYKILEPPPGY
QPIRTPTRKLTATPTPVGGSGFYIQQEDRSAKLVEDQPPGNLPYLKPDDVQYFDKLLVDV
DESTLSPEELKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQVSHILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVR
NTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRN
LVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAA
FLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQY
IKDEILPDFFKHFWQHRMALDRRNYRQLVDTTVELANKVGASEIINRIVDDLKDENEQYR
KMVMETIEKTMGNLGSSDVDSRLEEQLIDGILYAFQEQTQEVRTTFLILVVIEPLLIDED
YYARVEGREIISNLAKVCEMPVFILYDTQVVQTSANAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRNL
VEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYI
KDEILPDFFKHFWQHRMALDRRNYRQLVDTTVELANKVGASEIINRIVDDLKDENEQYRK
MVMETIEKTMGNLGSSDVDSRLEEQLIDGILYAFQEQTQESIMGHLGVVLYEYLGEEYPE
VLGSILGALKAIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
HVGAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN
RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA
VTPLLEDALMDRDLVHRQTACAAIKHMALGVAGFGCEDALTHLVNYVWPNIFETSPHVIN
AVMESIEGMRVALGPSRVLHYCLQGMFHPARKVRDVYWKIYNSLYIGSQDSLVAAYPTAP
SDEKNNFVRSELTYFL
NT seq 4551 nt   +upstreamnt  +downstreamnt
atgcatccgtcaagaaatggctacacagctcctgctgcattgttgaatgacattgctcat
tctggagaacatgtggacccatttgatcagcacagacagccaaccattgcagagcgtgaa
gatgagtacagagcaagaagaagacagatggtgatatctcctccaaggcatgatcctttt
gcagatggtaggtgtcagtggtattactatttaattaggttattagaccatacaataata
attgcccaatttgcttgtcttggtttgcaggcggaaatatttcgtcatgttagagaccag
gcagcatctggagagttacaaaagaccaaggaagcagcagcagcagcagctaagccagag
aggaagcgtcgtagatgggaccaacaagcatcaggagaggaaacaccagtcaagaaaaag
tccagcagttgggaccaagctgagatttccactccttctgctagccgatgggatgaaact
cctggtcgtccaaaaggctctgagacccccggggtaactccccacagaccaggctcagag
acaccaggggcaacccctagtacaaggatatgggagtcaacaccaggtcacgttacccct
ggacatgccacacccagtgctactcctggaggtaattgcagtagatctcagccaaagttt
acaaaaagtaatttcttcaaaaaacttttttttttttttttttcgtctgaaggtgaaact
ccagggcatgcaacacctggctgggcagagacaccaagaactgaccgaactggggcagag
acgcctggtgctacacccactcctggcagcaagaggcggtccaggtgggatgagacgcct
gcaagtcaaatgggaggcaccactcctatgattggtacaagtggagtgacacctgctggg
gctgctgccatgcagatgcaaaccccaaccccaggtcagatggccatgacaccagagcag
atgcaagcatatcgctgggagagagagattgatgaaagaaacagatacctgtcagatgat
gagctggattctcttttccctaaggaaggatacaagattcttgaacctccacctggttac
cagcctatcagaactccaacacggaaactgacagcaacacccactccagttggaggcagt
ggcttctacattcagcaagaagacagatctgccaaacttgttgaagatcaacctccgggc
aacttgccatatcttaaaccagatgatgtacaatactttgacaagctcttggtggatgtt
gatgaaagcactttgagtccagaagagttgaaagagagaaagatcatgaaattgctgttg
aagatcaaaaatggtacacctcctatgaggaaagcagccctgagacagataacagacaag
gcccgtgaatttggtgctgggccactgtttaaccagattcttcctctccttatgtctccc
acattggaagatcaggtcagtcatatccttgttgttattgagccgctgttgattgatgaa
gattactatgccagggtggaaggacgtgaaattatttccaacttggccaaggctgctggt
ttggctaccatgatctcgaccatgagaccagatattgacaacattgatgaatatgtccgt
aacacaacagcaagagcctttgctgtggttgcttctgcccttggtattccttccttgtta
ccattcttgaaggccgtttgccgcagtaagaagtcatggcaggcaaggcatacaggaatc
aaaatcgttcagcagatagctattttgatgggctgtgccattttgccacacttgagaaac
ttggtggaaattattgagcatggtttggttgatgaacagcagaaggtgcgtacaatcact
gctcttgccttggcagctcttgccgaagcagccacaccctatggtattgaatcttttgac
agtgtgttgaagccactgtggaagggtatcaggcagcacagaggaaagggtctcgctgcc
tttctcaaagccattggatatcttatcccacttatggacgctgagtatgccaattactac
accagagaagtgatgttgatcttgattcgtgagtttcagagtcctgacgaagaaatgaaa
aagattgtgcttaaggtggtaaagcagtgttgtgcaacagatggtgtcgaagctcagtac
atcaaggatgaaattttgcccgatttcttcaagcatttctggcagcacaggatggcactg
gacaggcgaaactacagacagcttgttgacaccacagtagaattggccaataaggttgga
gcatcagaaatcatcaacagaatagtggatgacttaaaagatgagaatgaacagtacagg
aagatggttatggaaaccattgaaaagactatgggtaaccttggatcttccgatgtggat
tcacgactggaggaacagctgattgatggcatcctgtatgccttccaggaacagacacaa
gaggtgagaactacctttctcatccttgttgttattgagccattgttgattgatgaagat
tactatgccagggtggaaggacgtgaaattatttccaacttggccaaggtttgtgaaatg
cctgttttcatcctgtacgatactcaggttgttcaaacatcagccaacgctgctggtttg
gctaccatgatctcaaccatgagaccagatattgacaacattgatgaatatgtccgtaac
acaacagcaagagcctttgctgtggttgcttctgcccttggtattccttccttgttgcca
ttcttgaaggccgtttgccgcagtaagaagtcatggcaggcaaggcatacaggaatcaaa
attgttcagcagatagctattttgatgggctgtgccattttgccacacttgagaaacttg
gtggaaattattgagcatggtttggtcgatgaacagcagaaggtgcgtacaatcactgct
cttgccttggcagctcttgccgaagcagccacaccctatggtattgaatcttttgacagt
gtgttgaagccactgtggaagggtatcaggcagcacagaggaaagggtctcgctgccttt
ctcaaagccattggatatcttatcccacttatggacgctgagtatgccaattactacacc
agagaagtgatgttgatcttgattcgtgagtttcagagtcctgacgaagaaatgaaaaag
attgtgcttaaggtggtaaagcagtgttgtgcaactgatggtgtcgaagctcagtacatc
aaggatgaaattttgcccgatttcttcaagcatttctggcagcacaggatggctctggac
aggcgaaactacagacagcttgttgacaccacagtagaattggccaataaggttggagca
tcagagatcatcaacagaatagtggatgacttaaaagatgagaatgaacagtacaggaag
atggttatggaaaccattgaaaagactatgggtaaccttggatcttccgatgtggattca
cgactggaggaacagctgattgatggcatcctgtatgccttccaggaacagacacaagag
tcaatcatgggtcatttaggtgtggtcttgtacgagtacctcggagaagagtacccagaa
gtactcggaagcatcctgggcgccctcaaggcaattgtaaatgtcatcggcatgaacaag
atgactccacctatcaaggatttacttccgaggttgacacccattcttaaaaacaggcac
gagaaagtacaagagaattgtattgacctcgtgggcagaattgctgacagaggagcagaa
catgtgggagcgagagaatggatgcgaatctgttttgagctgcttgaactgttgaaggcc
cacaaaaaggccatcagaagagctaccgtcaacacctttggttacattgccaaggctatt
ggtcctcaggatgttctcgccacacttctcaacaatctcaaagtacaggagcgtcagaac
agagtgtgtacaactgtggccattgccattgtggcggagacgtgctcgccgttcaccgtt
cttcccgcgctcatgaacgagtaccgcgttcccgaactgaacgtgcagaatggcgtcctc
aagtcgctgtccttcttgtttgaatatatcggggaaatgggaaaagattacatctacgct
gtcacgcctctgctagaagacgccctcatggacagagatctggttcacagacaaactgcc
tgtgcagccatcaagcacatggctttgggcgtggccggatttggctgcgaagatgcgctc
acccatctcgttaattacgtgtggccgaacatctttgaaacttcgcctcatgttatcaac
gctgtcatggaatctatcgagggaatgagagtggccttaggtccctctagggtccttcat
tactgtttgcagggtatgttccaccccgctcgaaaagttcgagatgtgtactggaagatc
tacaacagcctgtatattggatctcaggattcgctagtggccgcctacccaacagcacca
agcgacgaaaagaataattttgtccgatcagaactcacttatttcctttga

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