KEGG   Alicycliphilus denitrificans K601: Alide2_0460
Entry
Alide2_0460       CDS       T01463                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
adk  Alicycliphilus denitrificans K601
Pathway
adk00230  Purine metabolism
adk00240  Pyrimidine metabolism
adk01100  Metabolic pathways
adk01232  Nucleotide metabolism
Module
adk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
adk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:adk00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Alide2_0460
   00240 Pyrimidine metabolism
    Alide2_0460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adk03400]
    Alide2_0460
Enzymes [BR:adk01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Alide2_0460
DNA repair and recombination proteins [BR:adk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Alide2_0460
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNR-II_ins_dom
Other DBs
NCBI-ProteinID: AEB82879
UniProt: F4G3Q1
LinkDB
Position
477014..479449
AA seq 811 aa
MQRETTDLAPSLSTQPISMDVLKEKYFKDGESDVEDLFRRVARALASVEREDIREAMQAR
FLDNLRAGAIGAGRIMSAAGTDIQATLINCFVQPVGDCIQGVDDAGYPGIYEALREAAET
MRRGGGVGYDFSRIRPRGAMVKGTASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLR
IDHPDVLDFITAKRTPGRWNNFNVSVGVPDAFMQAVEQDREWELVHSAAPGAELLKEGAR
QRADGQWIYRTVRARELWDTIMKSAYDFAEPGILFLDQINTDNNLHYTETIQATNPCGEQ
PLPPYGCCDLGPIILTRFVRNPFGLHGEASFDFDAFEQAVATQVRALDNVLDVTFWPLPQ
QQAEAAAKRRIGVGFTGMGNTLAMLCKRYDRQDGRDMAVKIAERMRNAAYRASVELAKEK
GAFPKFQADGYLAKGTFASRLPEDIQKQIRKHGIRNSHLLSIAPTGTVSLAFADNASNGI
EPPFSWTYTRRKREADGSKSEYVVEDYAWRLYKTLGGDVNQLPAYFVSAMDMAAADHVAM
MEAVQPYVDTAISKTVNVPEDYPYDDFKGLYMQAWHSGLKGLATYRPNSILGAVLEVPAA
EAKPAKSEPAPEPVQPFDPMRVVIESRPKGGLSAVAEKIEYWTQEGHKRLYLIVSFLPVP
DGHGGTVDRAIEFFMPVGQSSESQQWITSSMRLLSLAARGGFLERALSDMRKVAWDRGPV
RLGTYQRADGAQVPLWHDSEVAAVAYAVQNILARRAEAPQQQVLPLDEPDMPAGMPPAMA
GKKCQECGAHAVIRKDGCDYCTQCGALGSCG
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgcaacgtgaaaccaccgacctcgcccccagcctgtccacccagcccatcagcatggat
gtgctgaaggagaaatacttcaaggacggcgagagcgatgtcgaggacctgttccgccgc
gtggctcgggccctggcctcggtggagcgcgaggacatccgcgaggccatgcaggcgcgc
ttcctggacaacctgcgcgccggcgccatcggcgcggggcgcatcatgagcgccgccggc
accgacatccaggccaccctgatcaactgcttcgtgcagcccgtgggcgactgcatccag
ggcgtggacgatgccggctaccccggcatctacgaggccctgcgcgaggccgccgagacc
atgcgccgcggcggcggcgtgggctacgacttctcgcgcatccgcccgcgcggcgccatg
gtcaagggcacggcgtccatggcctcggggccgtgcagctacatcaacgtgttcgaccag
tcctgctccaccgtggagagcgcgggcgcgcgccgcggcgcgcagatgggtgtgctgcgc
atcgaccacccggacgtgctggacttcatcaccgccaagcgcacgcccgggcgctggaac
aacttcaacgtctcggtgggcgtgcccgacgccttcatgcaggccgtggagcaggaccgc
gaatgggagctggtgcacagcgctgctccgggcgccgaactgctcaaggagggcgcgcgc
cagcgcgccgacggccagtggatttaccgcacggtgcgcgcgcgcgaactgtgggacacc
atcatgaagtcggcctacgacttcgccgagcccggcatcctgttcctggaccagatcaac
accgacaacaacctgcactacaccgagaccatccaggccaccaacccctgcggcgagcag
ccgctgccgccctatggctgctgcgacctggggcccatcatcctcacgcgcttcgtgcgc
aaccccttcggcctgcatggcgaggcgtcgttcgacttcgacgccttcgagcaggccgtg
gcgacccaggtgcgggcgctcgacaatgtgctcgacgtcaccttctggccgctgccgcag
cagcaggccgaggccgccgccaagcgccgcatcggcgtgggcttcaccggcatgggcaac
accctggccatgctgtgcaagcgctacgaccgccaggacgggcgcgacatggccgtgaag
atcgccgagcgcatgcgcaacgccgcctaccgcgcctccgtggagctggccaaggaaaag
ggcgccttccccaagttccaggccgacggctacctggccaagggcaccttcgccagccgc
ctgcccgaggacatccagaagcagattcgtaagcacggcatccgcaacagccacctgctg
tccatcgcgcctacgggcacggtgagcctggctttcgcggacaacgcctccaacggcatc
gagccgccgttctcctggacctacacgcgcaggaaacgcgaggccgacggcagcaagagc
gaatacgtggtcgaggactacgcctggcgcttgtacaagacgctgggcggcgacgtgaac
cagctgcccgcgtacttcgtgagcgccatggacatggccgccgccgaccatgtggccatg
atggaggccgtgcagccctatgtggacacggccatctccaagaccgtcaacgtgcccgag
gactacccctacgacgacttcaagggcctgtacatgcaggcctggcactcgggcctgaag
ggcctggccacctaccgccccaacagcatcctgggcgcggtgctggaggtgccggccgcc
gaggccaagcccgccaagagcgagcccgcgcccgagccggtccagcccttcgatccgatg
cgcgtcgtgatcgagagccggcccaagggcggcctgtcggccgtggccgagaagatcgaa
tactggacgcaggaagggcacaagcgcctgtacctcatcgtctccttcctgcccgtgccc
gacgggcatggcggcacggtggaccgcgccatcgagttcttcatgcccgtgggccagagc
agcgagtcgcagcagtggatcacctccagcatgcgcctcttgtcgctggccgcgcgcggc
ggcttcctggagcgcgcgctgtccgacatgcgcaaggtggcctgggaccgcggccccgtg
cgcctgggcacctaccagcgtgccgacggcgcccaggtgccgctgtggcacgactccgag
gtggccgccgtcgcctatgccgtgcagaacatcctggcgcgccgcgccgaggcgccgcag
cagcaggtgctgccgctggacgagcccgacatgcccgccggcatgccgcctgccatggcc
ggcaagaaatgccaggaatgcggcgcccacgccgtgatccgcaaggacggctgcgactac
tgcacccagtgcggcgccctgggcagctgcggctga

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