Auricularia subglabra: AURDEDRAFT_112762
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Entry
AURDEDRAFT_112762 CDS
T03129
Name
(GenBank) DNA repair helicase rad25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
adl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_112762
09124 Replication and repair
03420 Nucleotide excision repair
AURDEDRAFT_112762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_112762
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_112762
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AURDEDRAFT_112762
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AURDEDRAFT_112762
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AURDEDRAFT_112762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
EJD49042
JGI:
112762
LinkDB
All DBs
AA seq
873 aa
AA seq
DB search
MPPKRPAVDSPVASSSKRPRAADDADDFAVDSVQESDDDRDEEPLPTSILPRGASTKINI
TALTRKLALGKKNASAASDPNVDLSAYRRQQDALVSYIFREQDFSFLSLKPDHAARPLWI
NPEDGHIILEAFSPIAEQAQDFLVAISEPVSRPAFMHEYKVTSYSLYAAVSVGLETDDII
EVLNRLSKVPVPESIVQFIRDCTVSYGKVKLVLKHNKYFVESSHPDTLQLLLKDSIIRNA
RVVSDGTAAAVTASKAPQKGALVIPGTAKEPEKKGQPSKGPTDTPKNGEPSAVDKAKGDD
LFTAVIGVDNDEIDEDDETVHAFEIDDAKIDDVKKRCNELNYPMLEEYDFRNDTVNPNLD
IDLKPATVIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLCTS
AVSGMQWRQQFLQWSNVTDKQIAVFTSDQKEKFATESGIIVSTYSMVANTHNRSHESQKM
MDFLTSREWGFILLDEVHVVPAAMFRRVVTTIKAHAKLGLTATLVREDDKISDLNYMIGP
KLYEANWMDLAAKGHIANVQCAEVWCPMTPEFYREYLRAEARRKTLLYCTNPGKFQACQF
LVKYHEDRGDKIIVFSDNVFTLEQYARKLGKLYIHGGTPHVERMRILQHFQHHPNVNTIF
LSKVGDTSIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDT
QEMYFSTKRQQFLIDQGYSFKVITQLDGLESMPDLVYRTRDEQIELLQAVLQANENAGDL
GTDLKASEGDLAGTVTSNHFGRPGKAGYRAPKRTTGSLTALSGGQHMSYVEQNRSANKQL
AKDAASSRHKLFKKREKQQQQARKERNAGAKQG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaagcgtcctgctgtagactcgcccgtggcctcctcgtccaagcgcccgcgc
gccgccgacgacgccgacgactttgctgtcgactcggtccaggagtctgacgacgaccgc
gacgaggagccgctgcccacctccattctgccgcgcggcgcgtccactaagatcaatatc
accgcgctcacgcgcaagctcgcactgggcaagaaaaatgcgtccgcggcctcggacccg
aacgttgacttgagcgcgtaccgccgtcagcaagacgcccttgtctcgtacatcttcaga
gagcaagacttcagcttcctgtctttgaagcctgatcatgccgcccgtccgctctggatc
aatcctgaggacgggcacattatcctcgaagcgttctcgcccattgcagagcaggcgcag
gactttctggttgccatttccgagcccgtcagcaggccggccttcatgcacgaatataaa
gtcacgtcttactcgctctacgccgccgtgtccgtcggtctcgaaacggatgacataata
gaggttctgaatcgtctgtccaaggtccctgtccccgagagcatcgtccaatttattcgc
gattgtaccgtttcgtatggcaaggtcaagctcgtcctgaagcacaacaaatacttcgtc
gagtccagtcatccagatacgctccaactcctgctgaaggacagcataattcgcaacgca
cgcgtagtatcggatggtaccgctgctgctgtcaccgcctccaaggctccccagaagggc
gcgttggtcattcccggcacggccaaggagccagagaagaaaggccagccttccaagggg
ccgacggatacgccgaagaacggcgagccatctgccgtggacaaggcgaagggcgacgac
cttttcaccgccgtcatcggtgttgacaacgacgaaatcgacgaggacgacgagacggtg
cacgcctttgaaattgatgatgcaaagatagacgatgtgaaaaagcgctgcaacgagctc
aattaccccatgctcgaggagtacgacttccgcaacgacacggtcaatcccaacctcgac
attgatctgaagcccgccaccgtcattcgcccatatcaagagaagagtctgagtaagatg
ttcgggaatggccgtgcgcgatcgggtatcatcgtgttgccctgtggcgcaggcaagact
ctcgtcggaatcacagccgcgtgcaccatcaagaagagctgcttggtgttatgcacatca
gccgtgtcgggcatgcagtggcggcagcaattcctgcagtggtcgaacgtaaccgacaag
cagatcgccgtgttcacgtcggaccagaaggagaagttcgccacggagagcggcattatc
gtctcgacgtactccatggtcgcgaacacgcacaaccgctcgcacgagtcgcagaagatg
atggacttcctgacgtcgcgcgaatggggcttcatccttctcgacgaggtccacgtcgtg
cccgctgccatgttccgtcgtgtagtcaccaccatcaaggcacatgctaagctcggactt
actgccacattggtccgagaggacgacaagatttccgatctcaactacatgattggcccg
aagctgtacgaggcgaactggatggatctcgccgccaaggggcatattgccaatgtccag
tgtgcagaggtgtggtgccccatgacccccgagttctatcgcgaatacctcagggcggaa
gctaggcgaaagacgttactttattgcacgaaccctgggaagttccaagcctgccagttc
cttgtgaagtatcacgaagatcgaggggacaagatcatcgtgttttctgataacgtcttc
acgctcgagcaatatgcgcgcaagctcggcaagttgtacatccatggcggtacaccgcac
gtggagcggatgcgcatcctgcaacatttccagcatcaccccaacgtgaacaccattttc
ctgtcgaaggtcggcgacacttccatcgacctccccgaggcaacatgcctgatccagatc
tcttcgcattttggttcgcgccggcaggaggctcagcggctgggtcgtattctgcgcgcg
aaacgccgcaacgacgaaggcttcaatgccttcttctactcgctcgtctccaaggacact
caggaaatgtacttcagcaccaagcggcagcagttcctgatagatcagggatactccttc
aaggtgatcactcagctggacgggctggagagcatgccggatctggtctaccgcacacgg
gacgagcagatcgagcttcttcaggccgttctccaggccaatgagaacgcaggtgacctc
ggtaccgacctgaaagcatccgagggcgatctcgcaggcaccgtgacgtcgaaccatttc
ggccgaccaggcaaagcgggatatcgcgcgccgaaacgcacgaccgggtcgctcaccgcg
ctcagcggcgggcagcacatgtcgtacgtggagcagaaccggtccgcgaacaagcagctc
gcaaaggacgcggcgtcgtcgcggcacaaattgttcaagaagcgcgaaaagcagcagcaa
caggcgcgcaaggagcggaatgctggtgccaagcagggctag
DBGET
integrated database retrieval system
