Auricularia subglabra: AURDEDRAFT_140835
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Entry
AURDEDRAFT_140835 CDS
T03129
Name
(GenBank) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
adl
Auricularia subglabra
Pathway
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_140835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_140835
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_140835
Spliceosome [BR:
adl03041
]
Complex B
Other components
Prp19-related factors
AURDEDRAFT_140835
Complex C
AURDEDRAFT_140835
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
AURDEDRAFT_140835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_17
TPR_1
TPR_CcmH_CycH
TPR_11
SNAP
TPR_15
U3_assoc_6
UTP6_C
Motif
Other DBs
NCBI-ProteinID:
EJD55187
JGI:
140835
LinkDB
All DBs
AA seq
738 aa
AA seq
DB search
MQDGRAPRVKNRAPAAIQITAEQLLREAQERQEPQFRAPKQRVEDFEELHEYRGRKRREF
EERVRRTRGNLKEWLQYASWEASQGEFDRSRSVYERALDVDPRSVKLWMNYTEMELKGRN
IQHSRNLFDRAVTLLPRVDQLWYRYVYLEEMLQNVSGARQVFERWMKWEPDDKAWQAYIK
MEERYNEPDRASAIYERWVAIRPEPRVWVKWGKFEEERGRLDKAREVFQLALEFFGDDEE
QVEKAQAVFGAFAKMESRCKEYDRARVIYKFALQRLPRTKSNTLYAAYTRFEKQHGTRTT
LESTVLGKRRIEYEEELSHDGHNYDVWFDYARLEEGALKTLRDEDEEGEEEAINRVREVY
ERAVANVPPGNEKRYWRRYIFLWLDYALFEEIETKDYDRARQIYQTAVSVVPNKLFTFAK
LWVLFARFEVRRLDLPATRKILGTAIGMCPKEALFKAYIQLELELREFDRARQLYEKYLE
FDPTNSAAWIKYAELETQLQDFARSRAIFELAIAQPQLSMPELLWKAYIDFEFQEGERER
ARALYERLVGRSGHYKAWIAYALFEAAPIPALREVREEAEDEDEVPEVPGDLEVARKVFD
KAYKDLKSRGLKEERVRVLEAWKAFEEEQGTPDKVASVQAMFPVVSKRRRKGENGVDEED
YWDIVFPDDEREANPASFKFLQMAHMWKQKQATGGKALPLPSFIKAAEKEVSPEVQNGHG
RDVEMREDDDDAASSGGE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacggtcgggcaccacgagtgaagaaccgcgctcccgcggcgatccagatcacc
gccgagcagctgctccgcgaggctcaagaacgacaagagccccaattccgcgctccaaag
cagcgcgtcgaagatttcgaggagctccacgaatatcgcggccgcaagcgcagggagttt
gaagaacgcgtacggagaacgcgcggtaatctcaaggaatggctgcaatacgcgtcgtgg
gaggcgagtcagggcgaattcgaccgctcccgttcggtatatgagcgcgcgctcgacgtc
gacccgcgatctgtgaagctatggatgaactacacggagatggagctcaagggtcgcaac
atccagcactcgcgcaacctcttcgatcgcgctgtcacgctgctcccgcgcgtcgaccag
ctctggtaccgctatgtctacctcgaggagatgctgcaaaatgtctccggcgcccgccag
gtcttcgagcgctggatgaagtgggaaccggacgacaaggcgtggcaggcgtacatcaag
atggaggagcggtacaatgagcccgaccgcgccagcgctatctacgaacgctgggtcgcc
atacgcccggagcctcgcgtatgggtaaagtggggaaaattcgaagaagagcgcggacgt
ctcgacaaggcccgcgaggttttccaactcgcgttggagttcttcggcgacgacgaggaa
caggtggagaaggcccaggctgtatttggtgcatttgcgaagatggagagtcgttgtaag
gagtatgatcgtgcacgggtcatctacaagttcgccctgcaacggctaccacggaccaag
tccaacacactctacgccgcctacacgcgcttcgagaagcagcatggaactcgaaccaca
ctcgagtctactgtcttgggaaagcgccgcatagagtacgaggaggaactctcgcatgac
ggccataactacgatgtgtggtttgactacgcacggttagaggagggcgcgctcaaaaca
ttgcgagacgaagatgaggaaggcgaggaggaagccatcaaccgggtccgcgaagtctac
gagcgcgcagtagccaatgtccccccgggtaacgagaagcggtattggcggcgatacatc
ttcctttggctcgattacgcacttttcgaggaaattgaaacaaaggactacgatcgtgca
cgccagatctaccagacagccgtatcggttgtcccgaacaaattgttcactttcgcaaaa
ctttgggtactgttcgcgcggttcgaggttcggagattagaccttcccgcgacccgcaag
attttgggcacggcgataggcatgtgccccaaagaagcgctgttcaaggcgtacattcag
ctggaactcgagctccgcgagttcgaccgcgcgcggcaactgtacgaaaagtacctcgag
ttcgacccgacgaactcggccgcgtggatcaagtacgctgagctcgagacgcagctgcag
gacttcgcgcgctcgcgcgccatcttcgagctcgcgatcgcgcagccgcagctgtcgatg
cccgagctgctctggaaggcgtacatcgacttcgagttccaggagggcgagcgcgagcgc
gcgcgcgcgctctacgagcgcctcgtcggccgcagcgggcactacaaggcgtggatcgcg
tatgcgctgttcgaggctgctcccatccccgcgttgcgcgaggtgcgcgaggaggcagag
gacgaggacgaggtgcctgaggttccgggtgacctcgaggtggctaggaaggtcttcgac
aaggcgtacaaggatctcaagagtcgtgggctcaaggaggagcgtgtgcgtgtactcgaa
gcctggaaggcctttgaggaggagcagggaacgccggacaaggtcgcctccgtgcaggcc
atgttccccgtcgtcagcaagcgccggcgcaagggcgagaacggcgtcgacgaggaggac
tactgggacatcgtgttccccgacgacgagcgcgaggcgaacccggcgtcgttcaagttc
ctccagatggcgcacatgtggaagcagaagcaggccaccggcgggaaggcgctaccgctg
ccatccttcatcaaggccgccgagaaggaggtgtcgcccgaggtgcaaaatggacacggc
cgcgacgtcgaaatgcgcgaggacgacgacgatgccgccagcagtggcggagagtaa
DBGET
integrated database retrieval system
