Auricularia subglabra: AURDEDRAFT_54059
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Entry
AURDEDRAFT_54059 CDS
T03129
Name
(GenBank) Not1-domain-containing protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_54059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_54059
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_54059
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AURDEDRAFT_54059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-ProteinID:
EJD53347
JGI:
54059
LinkDB
All DBs
AA seq
2001 aa
AA seq
DB search
MAERFREAIDTAELEVLRHFDFARFADRIGLRPLERLILAAAILSHPVRTQLANQAATII
RVDFDNATLALCQHPSFDSADLSLQQVGKLLTMLLSDPGSDTPVLDPGQRQAIILAAQAK
FGPEAVAPILQAIFPTLSLQVGTSLVTALIQLGPEITSDSQTVRAVLARFGLTAAIPPTD
AQVVEIVQTLARRVADTHPLCDVGALIRALSSFGVSINWANVVRAFDWPDRQGVDTATLK
LVIAVLVHSPRDAEHPAVAGFWQTWSNPLSQLRLLDALLSLPSDTFNFVTLPGRRVVKVD
DVAGASPTIKALAANVQGHTWNSLDLFETLVRVGVSDSPEVRACVHDMLDKAVKISAELV
HMGLLQVPVRKPWNELQVEYSTKLLNMFLAGHPNHQLVFMRIWQIEPTYLTTAFRDFYTE
NPLNITRILDVAQDLKILDALLDVRPFIFALDVAALASRREYLNLDKWLADNITQHGSAF
LRAVIDFLDVKTTSEKQARVTENPDPRTMALNAQTIAIFLRVLRNSSSMLAQADIDYCLE
IRNACLQVYPRLMNLAPGSDQEPGFSVVSYSQEIESEVDGIYKQMYEENISIEQVIQMLQ
RMKESTTARDHEIFSCMLHFLFDEYKFFQSYYPARELNMTANLFGSLVQHKLIDYIPLGI
AIRYVLDALQCPSDSNLFSFGVQALSRFEGRLREWQPLCQALLRIPHFAEDRPDLADAAR
RALTAGDDSLDGMPPGVSDLIGVSNPIVFNAIQPDLMDDSFEEPPEELSDKILFIINNLA
PSNFDSKLQEMKERFADEFCRWLAHYLVDQRVSTEPNNHALYLRFLDGMEKQPLMKLIVH
ETIVKSANLLNSEKTMNSPSERTVLKNLASWLGELTLARNQPIKHKNIAFKELLLEGYDQ
HRLILAVPFVCKILEGSAKSKIFQPPNPWLMAVIALLAEVYHYADIKLNLRFEIEVLWKK
LDIDGANIEPTSLIRNRPPQNADVQQFGEGGPFDAPAVAPTELLPIGSSSPVEHQRNMTM
HIETILGSLPSVVVINPQLAPLQATQAFKQAVTMAVDRSVREIILPVVERSVTIAGISTR
EMITKDFATEGDEGRLRTSAHAMARRLAGSLALVTCREPLRSNLTAHIRSFLLEHGFTEQ
MVPDMLISLLVNDNIDIACNAIERAAMDRAAADVDESFVQAFDARRRHREQRPGISYWDQ
RVQVSNVTSNLPDLLRIKPGGLTNQQLHVYEEFSGDATKRRMISRPGSTASFTRSDRVPP
SNYSLEQVGAPEVDYMVPLSQGPVRLSPQEMLERFTHLMAEVDNVLGQSPQQSLTMLPQN
HPLKVLGRQIEGLAQSADNEDTLLNFSQRIVHALFKVSTQLGRDFYTAMLERLCRTSEKV
AHEALSWLLYSEDERKFSVPVIATLMRAGLIPLVEHDAHLAKLIVRTNNPTIIDFAVGLI
RQLTSAESSLTDSTLAKFHNSIDALRQAVRENKGTDAARRLIEDIFRVRAPQAVVAQQER
TRPNQQELSAWFMKWVQIFQRSASAEKSFVTFIQQLTKEGVLNGDEHTFAFFRVSAEACI
DNYRKQTSTGNLTNIFQPIDALSRLIALLVKYHGESSQDSFKIKLLSKILTIIVLVLAHA
HETQGADFQQKPFFRFFSSFLNDLHSMEANLGSTYFQILLSLANNFQTLQPTYFPGFAFS
WITLISHRLFMPKLLLSENREGWACFHTLVICLFKFLANFLRPVQLSDAVRDLYRGAMRL
LVVLLHDFPEFLSEYYFTICDVIPPRCIQLRNVVLSAYPASLVLPDPHLRNIKFDSLPDM
GPIPPILSEFTVPLKIGDLRSFLDQFLLNRASTASLPFLKEFLRSTETPDPTGEKYNLSA
INALVMYVGVSSVAQAKARSGSSIFVPSDPGVVLLQYLVTNLDAEGQYHVLSAAIMHLRY
PNAHTHWFSSLLLFLFAEINDEGFREIMTRALLERFIVHRPHPWGAMVTFIELLRNPRYE
FWTHDFTRVAPEIQLLLDGVS
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgattcagagaagccatcgacaccgcagagctcgaggtcctgaggcacttc
gactttgcgagatttgctgaccgcatcggcctccgtcccctcgagcggctaatcctggcc
gcagccattctgtcccacccagtcagaacacaactcgctaaccaggccgcgacaatcatc
cgcgtcgacttcgacaatgctacactcgccctctgccagcacccgtccttcgactcggca
gacctgtcgctgcagcaggtcgggaagctgctcaccatgctcctctccgatcctggctca
gacactcccgtgctcgaccccggccagcgccaggcgatcatccttgccgcccaagcaaag
tttggtccggaagcggttgcgcccattctgcaggctatatttccgactttaagcttgcag
gttgggacatcgctcgtgacagcgttgatccagcttgggcccgagatcaccagcgactcg
cagacagtgcgcgctgtcctggcgcggttcggcctgacagctgcgataccgccgacggac
gcgcaagtcgtcgagattgtccaaacactggcgcgccgcgtcgcggatactcatcccttg
tgcgacgtgggcgcgttgattcgggcattgtccagcttcggcgtttcgatcaattgggca
aatgtcgtccgcgccttcgattggccggatcgtcaaggtgtcgacaccgcgacgctgaag
ctcgttatcgcagtgctcgtgcattcgcctagagacgcagagcacccggccgtcgcgggc
ttctggcagacctggtcgaacccgctctcgcagctgcgcctactggatgcgctcttgtct
ctgccgagtgacacgttcaacttcgtcaccctgccgggtcgtcgcgtcgttaaagtggat
gacgttgcaggcgcaagcccgacaatcaaagcgctcgcagcgaatgtgcagggccatacg
tggaattcgctggacctcttcgagaccctcgtgcgcgttggcgtgtcggactcgccagaa
gtgcgtgcgtgcgtgcacgatatgctcgacaaggcggtcaagatcagcgccgagctggtc
catatgggtctgctgcaggttccagtacgcaaaccctggaacgagctccaagtggagtac
tcgaccaagctcctgaacatgttcttggccggccatcccaaccaccagctcgtcttcatg
cgcatctggcagatagagcccacgtacctgacgaccgcgttccgggatttctacacggaa
aacccgctcaacatcacccgcattctcgatgtcgcgcaggatcttaagatcttggatgcc
ctgttggacgtgcggccgtttatcttcgctctggatgtcgcggcgctggcgtcgagacgc
gagtacctgaacctggacaaatggctggcggacaacattacgcagcacggcagcgcattc
ttgcgcgcggtgatcgatttcttggacgtgaagacaaccagcgagaagcaagcgcgcgta
accgagaacccggacccgcggacaatggcactcaatgcacagacgatcgccatcttcctg
cgcgttctgcggaacagctcatccatgctcgcgcaagcagacatcgattactgtctcgag
atccgcaatgcttgtctccaggtgtatccgcgtctcatgaacttggcgcccggttcggac
caggaaccagggttctccgtcgtcagctattcgcaggagatcgagtccgaggtcgacggc
atctacaagcagatgtacgaggagaatatctccatcgagcaggtcatccagatgctgcag
cgcatgaaggagtcgacgacggcacgcgaccacgagatcttctcgtgcatgctgcacttc
ctcttcgacgagtacaagttctttcagtcgtactaccccgcgcgcgagctcaacatgacg
gccaacctcttcggctccctcgtccagcacaagctcatcgactacatcccgctgggcatc
gcgattcgctacgtcctggatgcgctgcagtgcccctcggactcaaacctgttctcgttc
ggtgtccaggctttgtcgcgctttgagggccggttacgcgagtggcaacccctttgccag
gcgctcttgcggatacctcacttcgccgaggaccgccccgacctcgccgacgctgctcgc
agagctctgacagctggcgacgacagtcttgacggcatgccgcccggtgtctccgacctc
attggcgtctcgaacccgatcgtgttcaatgcgatccagcccgacctgatggacgactcg
tttgaggagccccccgaggagctgtcggacaagatcctgttcatcattaacaaccttgcg
ccgtcgaacttcgacagcaagctgcaggagatgaaggagcggtttgcggacgagttctgc
cggtggctcgcgcactaccttgtcgaccagcgcgtcagcaccgagccgaacaaccacgcg
ctgtacctgcgtttcctcgacgggatggagaagcagccgctgatgaagctcatcgtgcac
gagacgatcgtcaagtccgcgaacttgctcaactccgagaagacgatgaactcgccgtcg
gagcggacggtcctgaagaacctcgcgtcgtggctcggcgagctcacgctcgcgcgcaat
cagccgatcaagcacaagaacatcgcgttcaaggagctgctcctcgagggctacgaccag
caccgcctcatccttgccgtgcccttcgtgtgcaaaatcctggagggctccgccaagtcg
aagattttccaaccgcccaacccatggctcatggcagtcatcgcgctcctcgccgaggtc
taccactacgcggacatcaagctcaatctgcgcttcgagatcgaggtgctctggaagaag
ctcgacatcgacggcgccaacatcgagcccacctccctcatccgcaaccgcccgccccaa
aatgcagacgtgcagcagtttggggagggtggaccgttcgacgcgcctgccgttgcacct
acggagctccttcccatcggctcgagcagccccgttgagcaccagcggaacatgactatg
cacatcgagaccatcctgggcagtctccctagcgtcgtggtcatcaaccctcaactcgcg
ccgttgcaggcgacgcaggctttcaagcaggcggttaccatggctgtcgaccgatccgtc
cgcgagataatcctgcctgtcgtggaacgctcggttactatcgctggtatttcgacgcgc
gagatgatcacgaaggactttgcgacggagggcgacgagggtcgcctccgtacctctgca
cacgccatggccaggcgtctcgctggcagcctcgccctcgtcacttgcagggagccgttg
cggagtaacctgactgcgcatatccgctcgttccttcttgagcacggatttactgagcaa
atggtccccgacatgctcatctcgctcctcgtcaatgacaacatcgacatcgcctgcaac
gccatcgagcgtgcggcgatggaccgtgctgccgccgacgtggacgagagcttcgtgcaa
gcgtttgatgctcgccgtcgtcaccgcgagcaacgcccaggaatcagctactgggaccag
agagtgcaggtctcgaatgtgaccagcaacctgccagatctcctgcgcatcaagccaggt
ggactgacaaaccagcagctgcatgtttacgaggagttctctggcgatgctaccaagcgg
cgaatgatcagtcgcccgggttcaactgcgtctttcactcgcagcgaccgtgttccaccc
agcaactacagcctggagcaagtcggcgctccagaggttgactacatggtcccgctcagc
caaggccctgttcgactctcgcctcaagagatgctcgagcgcttcacgcacctcatggcc
gaagtggacaatgtgttgggccagtccccacagcagtccctcacgatgctgccgcagaat
cacccgctcaaggtccttggccgccagattgaaggactcgcgcagtccgccgacaacgag
gatacgctgctcaacttctcgcagcgtatcgttcatgccctgttcaaggtctccactcaa
ctgggtcgcgacttctacacagccatgctcgaacggttgtgcaggacctcggagaaggtt
gcccacgaagctctgtcttggcttttgtactccgaggatgagcgcaagttcagcgttccc
gtgatcgcgacgctcatgcgcgccggtctgattccgctggtcgaacacgacgcgcacctg
gccaagctcattgtgcggacgaacaacccaacgatcatcgactttgccgtcggcctgatc
cgtcaattgacctcggcggagtcgtcgttgacagactctacgctggcaaagttccacaac
tcgatcgacgcattgagacaggcggtcagggagaataagggcacagacgctgctagacgc
ctcatcgaagatatcttccgtgttagagcgcctcaagccgttgtcgcgcagcaggagcgc
acgaggccgaatcagcaagagctctctgcctggttcatgaaatgggttcagatcttccag
cggtccgcgtcggctgagaagtcattcgtgactttcatccagcagctcacgaaggagggc
gtcttgaatggcgatgagcataccttcgcgttcttccgggtgtcggccgaggcttgcatc
gacaactaccgcaagcaaacatcgaccgggaacttgacgaacatcttccagccgatcgat
gccctttcgcgcctcatcgcccttctggtgaagtatcacggcgagagcagtcaggatagc
ttcaagatcaagttgctctccaaaattctgactatcatcgtcctcgttctcgcgcacgcg
cacgagacacaaggcgccgacttccagcagaagccgttcttccgcttcttctccagcttc
ctgaacgatctgcactccatggaggcgaacctcgggtccacatacttccaaatcctgctc
tcgctggcgaacaacttccagacgcttcagccgacgtacttccctggttttgcgttttcg
tggatcacgctgatttcgcatcgcctgttcatgcctaagctgttgctctccgagaaccgc
gaaggctgggcttgcttccacaccctcgtcatttgcctcttcaagttccttgcgaacttc
cttcgccctgtgcagctcagcgacgccgtgcgcgacctgtatcgcggagctatgcggctc
ctcgtggtcctcctgcacgacttccccgagttcttgagcgagtactacttcacgatctgc
gacgtcatccccccgcgctgcatccagctgcggaatgttgtgctcagcgcataccccgcg
tctctcgtcctccccgatcctcatctccgcaacatcaaattcgattcactgccagacatg
ggccctatcccacccatcctctccgagttcacggtgccgctcaaaatcggcgacctgcgc
tcgttcctcgaccagttcctcctgaaccgcgccagcaccgcgtcgctgcccttcttgaag
gagttcctccgttcaaccgaaacccccgatccgaccggcgaaaaatacaatctgtctgcg
atcaacgcgctcgttatgtacgttggcgtgtcgtctgttgcgcaagccaaggctcgcagt
gggtcgtccatcttcgtgccctccgaccctggtgtcgtcctcctgcagtatttggtcacc
aaccttgatgccgagggtcaataccacgtgctcagtgcggcgattatgcacttgcgctac
cccaacgcgcacacgcattggtttagctcgttgttgctcttcctcttcgccgagatcaac
gacgaggggttccgcgagatcatgaccagggcgctgttggaacgcttcatcgtccaccgc
cctcacccctggggcgcgatggtgaccttcatcgagttgttgcgcaacccgagatacgaa
ttctggactcacgacttcacccgcgttgctcccgagattcaactgcttttggacggtgta
agttga
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integrated database retrieval system
