Auricularia subglabra: AURDEDRAFT_97463
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Entry
AURDEDRAFT_97463 CDS
T03129
Name
(GenBank) cleavage/polyadenylation factor ia subunit Clp1p
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
adl
Auricularia subglabra
Pathway
adl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AURDEDRAFT_97463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_97463
Enzymes [BR:
adl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
AURDEDRAFT_97463
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
AURDEDRAFT_97463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
EJD53335
JGI:
97463
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MQSRKWVLEPESEYRFELDPGASLSITARLLPVVRGTAEVFGAELAPKRAYVFAQECKAA
VFTWEGCQLEMSNLVSVALAQYVSDETNMWPCANLHILFEKMRIRARQAQRGSPLPAGRS
EPRPDPPRLLVLGQENSGKTSVCKILSNYAVRTGLARSPLVVNLDPGEGAWTVPGTLSAC
PISTPILTSTPASPFGSTATSAPTATTSTALVPLVHWFGHTETRRNGKLVDHLIRRLAAS
VDTRLGHDPKSRLSGVIIDAPGSFSVASATSSPTDVKHPLVKACVDAFHVNHIVVIGNEK
LYVEMQRMFPKQSGVSVIKIPKSGGAVELDFAYRERVHSYQMRAYMYGFQFELPQGVTEA
MLGADTLHNLTLAPHSSSISFDDLKLFRVGGTDSMAPSSALPIGGSRIVSEIQPTPVDPS
LPGSGLLNAVLALLSPSPSGTEQTLTDRDVAGFLVVTAIDITGRKMTILAPTTGSLAGRT
ALVGSLEW
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccaggaaatgggtgctcgagcccgagtctgagtatcgcttcgagcttgatcct
ggggcatcgctgtccataacggcgcgtctcttgcctgtggtccgcgggaccgccgaggtc
tttggcgccgagctcgccccaaagcgcgcatatgtctttgcacaggagtgcaaggctgct
gtctttacatgggagggatgccagctcgagatgagtaacctggtctctgtcgctctggct
caatatgtctcggacgaaaccaacatgtggccctgcgccaacctgcatattctgtttgag
aaaatgcggatacgcgcgcgacaagcgcagcgggggtcgccactgcccgctggtcgctct
gagccgcgaccagacccgccacgactgcttgtactcggtcaggagaactccgggaaaacg
tccgtctgcaagatcctatccaactacgcggtgaggacgggtttggcccgctcaccgctt
gtggtcaatctggatcctggcgagggggcgtggacggtaccgggaactttgtccgcctgc
cctatctcaacgccgatcttgacgtctacgcccgcgagtccatttggatcaactgcgaca
tcagcaccgacagcaaccacctcgacagcgctcgtgcctcttgttcattggtttggccac
accgaaacgcggagaaatggaaaattggtggaccatcttatccgacgcttagctgccagc
gtcgacacacggcttgggcacgatccgaagtcccgcctatccggcgtaataatcgacgct
ccgggaagcttctccgtcgcatcggcgacgagcagtcccacggacgtcaagcatcccctg
gttaaagcttgtgttgatgcattccatgtgaaccacatcgtagtcattggaaacgaaaag
ctctacgtcgaaatgcagcgcatgtttcccaagcagagcggcgtgtcggtcatcaagatc
cccaaatccggaggagcggttgaactggatttcgcatatcgcgagcgcgtgcacagctac
cagatgcgcgcgtatatgtacggtttccagttcgagctcccgcagggtgttaccgaggcc
atgctcggcgccgatacgctgcataacctgacgctcgcgccccattcgtcttcgatctcc
ttcgacgacctgaaactcttccgcgtcggcgggaccgactctatggcgccgagctcagca
ttacccatcggcggctcgcgcatcgtgtccgagatccagcccaccccagtcgacccgtcg
ttgcccggctccgggctcctgaacgccgtgctcgccttgctatctccctcaccaagtggg
acagaacaaacgctcacagaccgtgacgttgcgggcttcctcgtcgtcaccgctatcgac
atcactgggcgcaaaatgaccatcctcgcaccgaccaccggttctctcgcagggcgcacc
gcgctcgtgggctcgctcgagtgg
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