Alicycliphilus denitrificans BC: Alide_3989
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Entry
Alide_3989 CDS
T01397
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Alide_3989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_3989
Enzymes [BR:
adn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Alide_3989
DNA repair and recombination proteins [BR:
adn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Alide_3989
Prokaryotic type
Alide_3989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADV01695
LinkDB
All DBs
Position
complement(4165411..4166127)
Genome browser
AA seq
238 aa
AA seq
DB search
MNDAPRSPTQLMSADPADWPVAPGWQPLVDGFFAGERGQALLAFLHARLEAGAAIFPPKP
LRALELTPPEQVRVVILGQDPYHGRGQAEGLAFSVAPGVRLPPSLQNIFKEMQRDLGVPF
PPFPDPGGSLVKWARNGVLLLNTCLTVEEGQAASHSGRGWEQLTDAVIHHVADGDRPVVF
MLWGSHAQSKRAFIPRDRGHLVLTANHPSPLSALRPPVPFIGCGHFGKARAFREQHGY
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcgccgcgctcccccacgcaactcatgagcgccgacccggccgattggccc
gtggcgcccggctggcagccgctggtcgatggcttcttcgcgggcgagcgcggccaggcg
ctgctggctttcctgcacgcgcggctggaggcgggcgccgccatctttcccccgaagccc
ctgcgcgcgctggagctcacgccgcccgagcaggtgcgcgtggtcatcctggggcaggac
ccgtaccacggccgcgggcaggccgaggggctggccttctccgtcgcgcccggcgtgcgg
ctgccgccctcgctgcagaacatcttcaaggaaatgcagcgcgacctgggcgtgcccttc
ccgccgttccccgaccccggcggcagcctggtcaagtgggcgaggaacggcgtgctgctg
ctcaacacctgcctcaccgtggaggagggccaggccgcgagccattccggccggggctgg
gagcaactgaccgacgcggtgatccatcacgtggccgacggcgaccggcccgtggtcttc
atgctctggggcagccacgcgcagtccaagcgcgccttcatcccgcgtgatcgcgggcac
ctcgtgctcacggccaaccacccctcgccgctgtcggcgctgcgcccgcccgtgcccttc
atcggctgcgggcatttcggcaaggcgcgcgccttccgcgagcagcacggctactga
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