Apis dorsata (giant honeybee): 102681998
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Entry
102681998 CDS
T09121
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X3
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102681998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adr03019
]
102681998
Messenger RNA biogenesis [BR:
adr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102681998
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102681998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
102681998
NCBI-ProteinID:
XP_006618713
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNFRDSCQEISVLVQWKGLEADRHLLRSLLSCIDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSFISNLCFAIDHPFHQQKTLNPSPKFFLRLKKV
LGLTLVQEVAFAIALLHSENTEIRTLALEHIQKQLPELIKNYINSETSNRHHEEGLHDSL
PEVLHLILSQAFHSANQFGLLSEAKEKFLKNLRRDFPRELVPVVLAPLLYPDNGETPQTK
IELNMAVNQMDGNSLVELIMELGYGFTSSVEECRSALAGLGAREISPTCAARVLAHMARS
CNNLDDAGGLQSFWSNSGATQDANKEKSNDSSAPSTWNIEVFVQALKEIQSTLSWNEVIV
KLDHAEFIIKDRQGLNLLITGLRLGLQHQGYPPDMFPVELFYRHWDNVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEAQTWRSLNVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINAPITLLRQELLSTLMPIFLGNHPNSAVILHHAWHGNTVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALTHLLTAQSYPFVIDLACLASRREYLKL
EKWLTDKIREQGEVFVTACVKFLQRRCPQVMGPGIKEDLTVPKASQLPQETLTTMLACLQ
VCAGSVSQECSEAIMTMVQNCSLMLSKSTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTTIGGLGRLGPPTGIEKARIPETSNLFPDMAQNVSKEIE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFPQY
PDKELQITAQLFGGIIERGLINSYMTLGLALRFVLDALRKPEGSKMYYFGITALDRFKSR
LKDYQTYCEHVRAIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTP
YKTITTTTITTSTTQAKSSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLK
SPEVYKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILHIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPALYLKDPEKLRNLEYQLSHPNKKSESNNNQQQSQGPIE
ELVGPTTTGTIVPQTAPANTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNNLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQVLASISTNLKQAFLTAMMGTTPQQKELAEQAANVVAADNMELAC
AFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVT
PQQMAVYEEFARNIPGFLPLSERDTQALLMPKPVTEPAVTAFAANPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLATEVEVLLAAMGPAAPPPQHAALHSLLESIILTRRSRDAGAAMAL
LKKAVEGLLDGPTISSGVIDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRCLTEC
REEFRYNFEAVDYLIRSHLISLPQYDLALAQAIDSGNAMATAFAMQLMQLYLIDERQTTH
VTESDLCNTIEILARIAHHRAPPEGILLFRLTSLMESLRANHDPAVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHNPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALAETNAAPSVVRAKCFHSLDAFVRLVALLVKHSGDSTN
THTKINLLNKVLGIVAGGLLQDHEIRGTDFHQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMKNLILSA
YPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFVNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFVELIKNPTYKFWTHEFVHCAPEIEKLFESIARSCMVQKQVQPTPEPEI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaattta
aataagaaaaattttcgggacagctgccaagaaatatcagttctggtgcagtggaagggt
ttggaggcagacagacatttgctgcgctctttactctcgtgcatcgacttttcaacagga
gaacctccagaatcaagtgcaaaagattattttcaagtgcaacttctaaaacaagagtgt
actaatcttcttagcaaaccttcttttatttctaatctgtgctttgctatagatcatcca
tttcatcaacaaaagactttgaatccatcaccaaagttttttttacgtttaaaaaaagta
cttggtttaactctagtacaagaagttgcatttgcaattgcattgctgcattctgagaat
actgaaattcgtacattagctttagaacacatacaaaaacagctgcctgaattgataaaa
aattatattaattctgagacaagcaatagacatcacgaagaaggattgcacgattcattg
cctgaagttcttcatcttatattatctcaggcttttcattcagccaatcaatttggcctt
ttatctgaagcaaaagaaaaatttctcaagaatttaaggcgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtacccagacaacggggaaactccgcaaaccaaa
atcgaactaaacatggctgttaaccaaatggatgggaattctctagtagaattgattatg
gaattaggatatggatttactagtagtgttgaagaatgtcgttcagctttagctggttta
ggagctcgagaaatttctccaacatgtgcagctagagttttagctcatatggcacgtagc
tgtaataatcttgatgatgctggaggattacaatcattttggagtaactctggagctaca
caagatgcaaataaggagaaatcaaatgatagttctgctccttctacatggaatattgaa
gtttttgttcaagcattaaaagaaattcaatcaacattatcctggaatgaagtaatagtt
aaattagatcatgcagaattcattattaaagataggcaaggattgaatttgttaatcaca
ggattaaggctgggcttgcaacatcaaggatatcctccagatatgtttcctgtggaactt
ttttatcgtcattgggataatgtagaaggacagttttctctagtacaacaaattttaaaa
tgccctgatatattttgctttgctgattatccatatcattctgtaactgttgatgtatta
aaagcagcgccagaaagtgatagtaaagaagcacaaacttggagatctttaaatgtagtt
gaattactgttacatatggcagaaagaggattatatggaccagttcaagaaatatttaaa
tggcccattcaacactgccctgatgttcttgtattggcattattacagattaatgctcct
attactttactcagacaagaattacttagtacattgatgcctatttttttgggaaatcat
ccaaactcagctgttattctacatcacgcgtggcatggaaatacagttaaaataaaatct
attattatgcatgctatggcggaatggtatatacgtggagatcatgatcaaacaagatta
tctcgtattcttgatgttgctcaagatcttaaagcattaactcatttattgactgctcaa
tcatatccatttgttattgacttagcttgtttagcttcaagaagagaatatttaaaatta
gaaaaatggttgacagataaaattagagaacaaggagaagtatttgttactgcatgtgta
aaatttttacaaagacgttgtcctcaagtaatgggacctggtataaaagaagatcttact
gtaccaaaagcaagtcaacttcctcaagaaacattaacaacaatgcttgcttgcttgcaa
gtgtgtgctggtagtgtatctcaagaatgttcagaggcaataatgacaatggtacaaaat
tgtagtctaatgttgagtaaaagtacaatgagtagacctcctccgccaggagttttacga
catcgtggattggaaccttttaatccagcaactttgggaggacaattgttttcttcaaaa
caagtggatccgcttggaaatttaagttcaagtcttgcatctatgggtttgggttccagt
cttggtccaccaagtagttctgcatttaatttaccaggtgctcttggacctttagtatca
gcacctggttctccttctcgtctcatgggaccttctccaagtccatttccaatgttgcca
ttatcttcacaattacattcaggaccagttggtacacaaggaccatctgtcttacctggt
agtacaacgattggaggattaggacgacttggaccaccaacaggcattgaaaaagcaaga
atacctgaaacatcaaacttatttcctgatatggcacaaaatgtttccaaagaaattgaa
gatgaagcaaatagttactttcagcgtatatataatcatccaccacatcctactttatca
attgatgaagttcttgatatgttaaaaaaatttcaagattctggtagtaaaagagagaga
gaagtattcaattgtatgttaagaaacttatttgaggaataccgattttttcctcaatac
ccagataaagagttacaaattacggcacaactgtttggaggaattattgaaagagggttg
attaatagctatatgacacttggattagctttgagatttgtattggatgcacttaggaaa
ccagaaggcagcaagatgtattactttggcataacagctctggatcgtttcaagagccgt
ttaaaagactaccaaacatactgtgagcatgtcagggcaattcaacatttcagtgagttc
ccaccacatttaattgagtatatagaatatggattacaggggcaggagcctcccacgaga
cctcaaggtccagttctcccaaaaactttagcagctatgttggcaccagttactacgcca
tataaaactattacgacaacaacaataacaacaagtactactcaagcgaaatcgtctacg
actccaaccacttctctctcagctagaccttccattgctaatgcaacaaacattgataca
ttattagtagcaacagataaagaagaaaagattacgacaccaccagaagctttacaagat
aaaacagcatttatttttaataaccttagtcaactcaatttacaacaaaaatgtgatgaa
attcgggaaattgttacagaagagtattggccttggatggctcagtatttagtaatgaaa
cgtgcaagcatagaattaaatttccatgctttatattcaaattttttagattgtttgaaa
tcgccagaagtgtataaaatggttactagagaaacatttagaaacataaaagttttattg
cgaagtgataaaggaatagcaaatttttctgatcgttcgcttttaaaaaatttaggtcat
tggttggggatgttaacccttggcagaaataaacccattttacatattgatatagattta
aagagtttacttgttgaagcatatcataaaggtcaacaagaacttctttatgttgttccc
tttgttgctaaagtactagaaagttgtgcaaaaagtcgtgtttttcgtccgcctaatcct
tggacaatggcaattatgaatgttttagcagaattgcatcaagaacctgatttaaaactt
aatttaaaatttgaaatcgaagtgttatgtaaaaatttaagtattgatgttggtgaatta
aaacctgcactttatttaaaagatccagaaaaattacgaaatttagaatatcaattatca
catcctaataaaaaatctgaatcaaacaacaatcaacaacaatctcaaggtcctattgaa
gaattagttggacctactacaactgggactattgttccacaaacagctccagcaaataca
acaccatctttacctactggtccaccagaaccgcgttttaattatatggatatatctgta
acaggcattgccaatatttctcagcatatcaccattaataataatttgccattattccaa
acacatccacatttaaaacaatttgttcgtccagctgttgaaagagcaattcaagaatgg
attcatcctgtagtggatagatcaataaaaatagctctaactactagtgaacagattgtg
agaaaagattttgcattagatccagaagaagttcgtatgagaacagcagcaagacatatg
gttcgtaatttaactgctggaatggctatgatcacttgtcgtgatcaagttttggcgtca
attagtacaaatctgaaacaagcttttttaactgcaatgatgggcacaactccacaacaa
aaagaacttgcagaacaagcagctaatgtagtagctgctgacaatatggaacttgcttgc
gcatttgtacaaaaaacagctattgaaaaagcaattccagaaatggataaacgtttatta
aatgaaattgaattacgaaaaattgcacggcaagaaggaagaagatattgcgatccatta
gctaaatatcaggctgaaagaatgcctgaacaaataagattaaaagttggcggagtaact
cctcaacaaatggctgtttatgaagaatttgcgagaaatattccaggatttttaccatta
tctgaacgagatacacaagctttactaatgccaaaacctgttacagagcctgctgtaact
gcatttgctgctaatccagccgttgcagtagcaacagcacaacaggtcgctgcatatgca
gcagcagtgagtaatgatgaagttggagccatgttagaaaagcttgcaactgaagttgaa
gtattgctcgctgcaatgggtccagccgcacctcctccacaacatgctgcccttcatagt
ctcttagaatcgattatcctaacacggaggtcaagagatgcaggtgctgctatggcatta
cttaaaaaggctgtagaaggattattagatggccctaccatttccagcggtgtaatagat
tcggaaattatattacgatatagagaacttcatttacgcattttaaaatgtcttcaagat
ccacgtgcttatggtatgcaatggacaaacaaacatgttactcgatgtttaacggaatgc
agagaagagtttcgatataattttgaagctgtcgattatcttattagatctcatttaatt
agtcttccacaatatgatttagctttggctcaagctatagattctggaaatgctatggca
acagcatttgcaatgcaattgatgcaactttatttaattgatgaaagacaaactacacat
gttactgaatctgatttatgtaatacaattgagatacttgcaagaatagctcatcataga
gcaccacctgaagggattttactatttagactgacaagtttaatggaatcattgcgtgct
aatcatgatccagcagtattagcagatagagcccctgctggtcctacagcacatattcat
tctggaattctacaggtgagagctcgtgatttcgatgatccacctggattgatggagaaa
acagaatatttattacgcgaatgggtttcaatgcatcataacccaacacacgctcgtgat
cctacaaaagcttttggaatgtttgttcatcaaatgaacattcatggaattcttaaaact
gatgatctcataacaagattctttaaattaagcactcaaatgtgcgttgatctgtgttat
cgtgctttagctgagacaaatgctgcaccatcagttgttcgtgcaaaatgtttccattcg
ttggatgcatttgttcgtttagtcgcacttttggtaaaacattctggtgatagtacaaat
actcacacaaaaattaatttactaaacaaggttttgggaattgtggctgggggattacta
caagatcatgaaatacgaggaaccgattttcatcaattgccctatcacagaattttcatt
atgcttttcctggagctttgtgctcctgaacctgtattagaagcagtaaattatcaagta
ttaactgctttttgccatacgctacatatacttagaccagccaaagcttcgggattttgt
tatgcttggctagaattagtttcacacagagtttttattgggcgtatgcttgcgattaca
ccgcaacaaaaatgttggggcatgtatgcgcaacttttaattgatctatttaagtatctt
gcaccataccttcgaaatgctgaacttgcaaaacctgttactttgttatacaaaggaact
cttagagtactattagtcttattacacgattttcctgaatttctttgtgattatcattat
ggattttgtgatgtaattccacctaattgcatacaaatgaaaaatcttattttaagtgca
tatccaagaaatatgcgattacctgatccatttacaccaaacttaaaagttgatatgcta
caagagatagctcatgctcctcgagtattaaccaattttgcgtctatgatacaaccatta
agtttcaaaaaagaacttgattcgtatttaaaagcgcgagctccagttacttttctttct
gaattgcgcagtaatttacaagtatctcaagaagctggtgttcgctataatattcagtta
atgaatgctctagtactttatgttggaacacaagctatagcttttattcgcagcaaagga
catactcctaatatgtctactattgcacattctgcacatatggatatatttcaaaactta
gcagtcgatctcgatacagagggtcgttatttattcgtaaatgcaattgcaaatcaattg
cgatatcctaacagtcacacgcattacttcagttgcactcttctatacttgtttgctgaa
gctaatacagaagcaatacaagaacaaattacgagagttcttcttgagagacttattgta
aatagacctcatccatggggtcttcttattacttttgttgaacttattaaaaatccaaca
tataaattctggacgcatgaatttgttcactgtgcaccagaaatcgaaaaattattcgag
tcgatagctcgatcgtgtatggttcaaaaacaagtacagcccactccagaaccggagatt
ccagagtga
DBGET
integrated database retrieval system
