Arachis duranensis: 107462138
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Entry
107462138 CDS
T04300
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107462138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107462138
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
107462138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_11
TPR_8
TPR_14
TPR_19
TPR_17
TPR_12
TPR_9
TPR_CcmH_CycH
ARM_TT21_C
TPR_7
BTAD
TPR_10
TPR_15
Motif
Other DBs
NCBI-GeneID:
107462138
NCBI-ProteinID:
XP_015936190
UniProt:
A0A6P4BW72
LinkDB
All DBs
Position
8:complement(31771735..31780421)
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AA seq
1183 aa
AA seq
DB search
MESQTHNEEQGVEHLFRRLQDFPDDASLHFDIGLFLWEKGGEANGSTEKAAEHFIESAKL
NPKNGEPFKYLGHYYGRISIDTQRALKCYQRAVALNPDDSDSGEALCNLLYQGGKDSLEA
AVCREASEKSPRAFWAFRRLGFLQVHQKKWSEAVQNLQHAIRGYPTCAELWEALGLAYQR
LGRYTAAIKSYGRAIELDDKMVFALVESGNISLTLGSFRKGVEQFRQALEISSQCVPAQY
GLALGLLCLAKDCMNLGAFKWGASLLEEASEVARASAYSVRNVSCIWKLYADVQLAYARC
YPWIEEVQELEANKEAFSASIISWRRTCLSAARLARFSYQRALHLCPWQANIYADIAVTS
DLITSLDKDYERDLDACRQLPEKMCVGALLLEGDNYEFWVTLGCLSDQNALNQHALIRGL
QLNVSLAVAWGYLGKLYSKMSKKKLARQMFDRARSIDPSLALPWASMSADCCVRESAPDE
AFESCSQAVQMMPLAEFQIGLTKLAMLSGHLSSTQVFGAIQQAVQRSPHYPESHNLHGLV
CESRKDYRSAAISYRIALHAISIALLDNQNSQIKDVSINLARSLCKAGNAVDAIQECENL
RKEGMLDFEVFQVYAISLWQLGKNDLALSIVRSLAASVSSMEKTAMEISVSFIFRLLYYI
SGLDAVITNIMKMPKELIQSSKVNFVMSAIDALDGHNRLGFLVSRNLYFLNDHDEIDRVH
FLIALGKLVKNGHDGFLAVQSGIAYLKRILHMFPNCSLIRNLVGYLSLSGKESNSCHLAT
RCCKLDHLDLSDKEGLKSASDIHGAAVVACYANGNSNPKSTFQTCTNQCSRGPAAIRYLQ
RYFHQKPWNHDARYLLILTYFQRAREERFPHQLCVILNRLICVALSNEFCGKKEMCYEYR
QFQLLLCASEISLQCGNHITSISHAQKASVLVLPDNYLFFAHLLLCRVYAIKGDLLNCKK
EYIRCLELRTDCHIGWMSLKLMECHYQLQIDSNVIDSNFEECLKKGANSWNMWIAVYNLV
RGLISFHQKDLISAEELMREACSMAGFESCLFLCHGAICMELARQYGGSMLLSWAVDSLN
RFHELLPISLPLASLLVAQAEGSLGAKDKWDRSIRLEWYSWPSVMRPAELYFQMHLVVRQ
LKDGPNVTGRLESSHSAWRWVIRAIHMNPSCMRYWKVLQKLMQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcaaacacataatgaggaacaaggtgtagaacatctcttcagacgcttgcag
gatttcccagacgatgcgtcgctgcattttgatattggcttattcttatgggaaaaagga
ggagaagcgaatggatccacagaaaaagcggctgaacatttcattgaatcagccaaattg
aaccccaagaatggagaacctttcaaatatcttggtcattattatggccgcatttccatt
gatactcagagagcccttaagtgttatcagcgagctgttgctctcaatcctgatgattct
gattctggggaagctctttgcaatttactataccaaggaggaaaggatagtttggaggca
gcagtatgtcgtgaagcttctgaaaagtcaccaagggccttttgggcattccgtagattg
ggtttcctgcaggttcatcagaagaaatggtccgaagctgttcagaatcttcaacatgcc
atacgaggctatcctacatgtgctgaactgtgggaagctttgggccttgcttatcagcga
ttgggcaggtatactgcagccataaagtcttatggccgtgccatcgagttggatgataag
atggtctttgctttggttgaaagcggaaatatctcattgacacttggttcatttaggaag
ggagttgaacaatttcgacaagctttggagatttcatcacaatgtgtgcctgcacaatat
gggcttgctttggggctgctttgtttagcaaaagattgcatgaacctgggagcatttaag
tggggggcttctttattagaggaagcatctgaggttgcaagagcaagtgcttattctgtt
aggaatgtctcatgtatttggaaactatatgctgatgttcagcttgcatatgcaagatgt
tatccttggattgaggaggtccaagaattggaagctaataaggaagctttcagtgcttcc
atcatttcttggaggagaacctgtctttcggcggcaagacttgctaggttttcgtatcaa
cgagccttgcacttgtgtccatggcaagcaaacatttatgcagatattgctgtaacttca
gatcttattacctcattggacaaggattatgaacgagacttagatgcatgtaggcagctg
ccagagaaaatgtgtgtgggagctttgctgcttgaaggtgacaattatgagttttgggtg
acattgggatgtttgtctgatcaaaatgcactaaatcaacatgctctaatcagaggattg
cagttgaatgtatctctagctgttgcttggggatatcttgggaagctttatagtaaaatg
agcaaaaagaaattggcacggcaaatgtttgatcgtgctagaagtattgatcctagcctt
gctttgccatgggcaagcatgtcagctgattgttgtgtgagggagtctgctcccgatgag
gcgtttgagagctgttcccaagcagtgcagatgatgcctttagctgaattccaaattggt
ctcactaagcttgctatgctgagtggccatctttcatctacacaggtttttggagctatt
cagcaagctgtgcagcgttctcctcactatcccgaatcacataatttacatggtctggtt
tgtgagtctcgaaaagattacagatctgctgctatttcttacaggatagccctccatgcc
attagcattgccttgttagataatcaaaactcacagataaaagatgtatcaattaatttg
gcgagatcactttgtaaggctgggaatgctgttgatgctatacaggaatgtgaaaatttg
aggaaagaaggaatgcttgacttcgaagtttttcaagtatatgcaatctcgttgtggcaa
cttggtaaaaatgatttagcactctcaatagtcagaagtcttgcagcaagtgtttcttct
atggaaaagacagccatggaaatctccgttagtttcatttttagattattatactacatc
agtggactagatgcagtcataaccaacattatgaaaatgccaaaggagcttattcaaagt
tcaaaagttaattttgttatgtctgctatcgatgctcttgatggacacaatcgtcttgga
tttcttgtctcaaggaacctatattttctcaacgatcatgatgaaattgacagggtgcac
tttctaatagcacttggtaaactggtgaaaaatgggcatgatggcttccttgcagttcag
agtggaattgcctacctcaaaaggattctgcacatgttccctaactgtagtttgataagg
aaccttgttggctatctctcactatctggtaaagagtcgaacagttgccatctggctaca
aggtgttgtaaactggaccatcttgacctttctgataaagaaggtttaaaatcagcttct
gatattcatggtgctgcagtagttgcctgctatgccaatgggaacagcaacccaaagtct
acttttcaaacttgtacaaatcagtgttctagaggtcctgcagcaatccgatacctgcag
agatactttcatcagaaaccatggaatcatgatgctcggtacttgcttattcttacctat
ttccagagggcacgtgaagagagatttcctcatcagctgtgtgttattctaaatcgtcta
atatgtgttgctctttcaaatgaattttgtggaaagaaagaaatgtgctatgaatataga
caatttcaacttctactttgtgcttctgagatcagtttacaatgcgggaatcacatcacc
tctatctcccatgcccaaaaggcctctgtactcgtgcttcctgataattatttgttcttt
gcccacctactattgtgccgtgtatatgccataaaaggtgatcttttgaattgtaagaaa
gagtatattcgatgcttggagttgaggacagattgccatattggttggatgtctctcaaa
cttatggaatgccattatcaattgcaaattgattcaaatgtcattgattcgaactttgaa
gaatgccttaaaaagggtgcaaattcatggaatatgtggatagctgtgtataacctggtg
aggggtttgatttcctttcatcagaaggatttaatctcagccgaagagctcatgcgagag
gcttgttcaatggcaggttttgaaagctgcctttttctatgtcatggtgctatctgcatg
gagcttgccaggcagtatggcggttcgatgctcctatcatgggctgttgatagtcttaac
agatttcatgagcttttgccaatctctttgcctcttgcctccttattggttgctcaagca
gaaggaagccttggtgcaaaagacaaatgggacagaagcattcgccttgaatggtattcc
tggccatcagtaatgaggcctgcagagctctactttcaaatgcatttggttgtaaggcag
ttaaaagatggacccaacgtcacaggtagattagagtcctctcatagtgcttggagatgg
gtaattcgggcaattcacatgaacccttcttgcatgagatattggaaggtcttacagaag
cttatgcagtag
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integrated database retrieval system
