Arachis duranensis: 107473165
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Entry
107473165 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107473165
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
adu
Arachis duranensis
Pathway
adu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107473165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107473165
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107473165
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107473165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
107473165
NCBI-ProteinID:
XP_015948198
UniProt:
A0A6P4CAY0
LinkDB
All DBs
Position
2:7244212..7261938
Genome browser
AA seq
2430 aa
AA seq
DB search
MTAVESQPSLTAMAPTILSSAAPNQIRFLLTSLNEVNFDSVLHQLSQFAEFGTVGCILLL
QTCFDHFNYVRRDLKDVKYEPILGAVIKHLLDKPNFSTVFSESMKNIDINENFLANFCNG
LQLSLLEKITISLALSDSENPETRLSGKKFCMAQIEELHANPGALSCHEQIHNIIMFLKQ
SEGLSKHVDSFMQILALVQFKDTPPFVLNPLLPDEMHEAEFLRNMELFHDSVENDFDAIL
ADIQKEMNMGDIVKELGYGCTVDVSQCKEILSLFLPLTDSALSKLLGAIARTHAGLEDNQ
CTFLTFGAALGYNNLSELPLPNSWNIDVLIDTIKQLAPQTNWVRVIENLDHEGFFLPSEE
AFCFLMSVYRHACKEPFPLHAICGSVWKNTEGQLSFLKYAASAPPEVFTFAHSTRLLAYN
DAINGLKLQNGHANHAWLCLDLLDVLCQLAEKGHASYVRLILDYPLKHCPEVLLLGMAHI
NTAYNLFQHEVSLVVFPMILKSAGGSGMIQHLWHANPNLVLRGVIDSQNNDLDSVTRIVD
ICQELKILSSVLEVIPSYYSIRLAAVASRKEFLDLEKWLSNNLSMYMDVFFEVIFLPSFV
VFNNXYSKMYAFIWSCSFXSFGRSQSLSGKSFHQSGAVLNLYAETTPTFLKVLKSHTDFV
NSSQLSEELERLQVSMIDSNPRLQNGAPADSSTSDGYSDDIEHEANSYFHQMFSDLLTIN
AMVQMLARFKESSVKREKSIFDCMIGNLFEEYKFFPKYPERQLKIAAVLFGSIIKHHLVT
HLSLGIALRYVLDSLRKPADSKMFTFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSE
IVTFIEQALARISAGHADVDGVNHASLISNHNSAHTMLGHVEQLNGSGVIQPGQQHISLQ
LQQRRDIPLDDRHKASVGSSTDVKPILSSVGQSSAVTPADTSSSNKLHSTGSASSMLSSP
GFVRPSRGATSTRFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISTANIEAK
AKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCK
VLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVI
PFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDMKD
VTPTSLLKDRKREIEGNPDFSNKDVGASQAQMMSDIKSSLIQPVNQVELPLEVTNPSNTG
AHPHLLSQYASPLHISTGALMEDEKVTPLGLSDQLPSAQGLLQATPTPVPFSLSQLPSQI
PNIATHLIINQKLSGFGLQMHFQRAVPIAMERAIKEIVSSIVQRSVSIATQTTKELVLKD
YAMESDETRIVNAAHLMVASLAGSLAHVTCKEPLRASISSQLRISLQNLNIANEILEQAV
QLVTNDNLDLGCAVIEQAATDKAITTIDTEINQQLSMRRKHREGMGSTFFDTNLYTQSSM
GVVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSSGLSVQSGNAGLAGTNGS
VSGQINPGYSVSSSYEGGVSRPVEDMSESNLAQHFSASSIHIRAADSVSQHSLEKESVAS
FPSTASTPELHTVDTSDAMKESGASQPLVSSSAVERLGSSFLEPTISTREALDKYQMVAQ
KLEALVNNDAKEAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNVSNNTHVGAH
LAILTAIRDVCKLAVKELTSWVIYSEEERKFNKDITVGLIRSELLNLTEYNVHMAKLIDG
GRNKAATEFSISLLQMLVVEESKVISELHNLVDALAKLASKPGSPESLQQLIEMIKNPSV
NPASLSVSVPAKEDKARQSRDNKGPGMLAPNREEVNIVESVEPDPAGFREQVSMLFTEWY
RICELPPPNDTASTHFILQLHQNGLLKGDDVTDRFFRLLMELVVTHCLNSEVINSGALQS
SQQLPAMSFIAIDIYAKLVFSILKGSNKSFLLSKILAVTIRLILKDAEEKKASFNPRPYF
RLFINLLLDLGSLEPVTDGANLQILIAFANTFHALQPLKVPAFSFAWLELISHRSFMPKM
LTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRFLYKGTLRVLLVLLHDFPEFLCD
FHFTFCDVIPPSCIQMRNIVLSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAAI
KAKQIKADVDEYLKDKVSELKDKMLLSPNEAASAGTRYNVPLINSLVLHVGMQAIQQLQG
RSPHAQSASPGFPLAVFSVGAALDIFQTLIVELDTEGRYLFLNAVANQLRYPNTHTHYFS
FILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRC
APEIEKLFESVSRSCGGPKPVDESMVSGWV
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtcgaatcccaaccctccctcaccgccatggcccccaccatcctctcctcc
gcagctcccaaccagattcgcttcttgctcacctccttgaacgaagtcaactttgactcc
gttctccatcaactctctcagtttgctgagtttggaaccgttggatgcattttgctgctt
cagacatgctttgatcactttaattatgtcaggagagatttgaaagatgtgaagtatgag
ccaattcttggggcagtcataaagcacctcctggacaaaccaaactttagcacggtgttt
tcggagtcaatgaagaatatagacatcaacgaaaacttcctagcaaatttttgtaatgga
ctacagttgtctttactggaaaaaattaccatcagtcttgcattatctgattctgaaaat
cctgaaaccaggttatctggcaagaaattttgcatggctcagattgaggaattgcatgcc
aatcctggtgctttgagttgccatgaacaaattcacaatattatcatgttcctcaagcaa
tcagagggtctctccaagcatgtagattcctttatgcagatattagcattggtgcagttc
aaggacaccccaccttttgttctgaatccgctgctacccgatgagatgcacgaggctgaa
tttttgaggaatatggagttgttccatgattctgtagaaaatgattttgatgctattttg
gcagacatacagaaggaaatgaacatgggagatattgtgaaggaactaggctatgggtgc
acagttgacgtctctcagtgcaaggagatcttgtcacttttcttacctttaactgacagt
gccctctctaaattacttggtgctattgctcgtacccatgcagggctggaggacaaccag
tgtacattcttaacttttggtgcagcccttggatacaataacttgtctgagttgccactg
ccgaactcttggaacattgatgtgttgatagatacaatcaagcagcttgcacctcaaacc
aactgggtacgggttattgaaaatcttgatcatgaaggatttttccttcctagtgaagaa
gcattctgttttctgatgtctgtgtatagacatgcctgtaaggagccgtttcctctccat
gccatctgtggatctgtgtggaagaatactgagggtcagctatctttcctaaaatatgct
gcatcagcaccaccggaagtgtttaccttcgcgcactctacaaggctgctggcatataat
gatgcgattaatggcctcaagcttcaaaatggacatgctaatcatgcatggctgtgtctt
gaccttctggatgttctctgccagctagctgagaagggtcatgccagttatgttcggttg
atacttgattatcccctgaaacactgtcctgaagtcttgcttctagggatggcacacatt
aatactgcttacaacctcttccaacatgaagtatctctagttgttttccccatgatacta
aagagtgctggaggtagtggaatgattcaacatctatggcatgctaatcctaatctggtc
ttacgaggggttattgattcccaaaacaatgacctggacagtgttacaagaattgttgac
atctgccaggagctaaagattctatcatcagtactggaagtcattccctcctattatagt
ataagattagcagctgttgcttcaagaaaagaattccttgaccttgagaagtggctgagt
aacaacttatctatgtacatggatgtcttctttgaggtaattttccttccctcattcgtt
gtctttaataactagtacagtaaaatgtatgcattcatttggtcttgttctttttaatct
tttggtagatcacagagcttatctggtaaatcttttcatcagtctggtgctgttctgaat
ctttatgctgagactactcctaccttcttgaaggttctgaaatctcatactgactttgtt
aactctagtcaactttctgaggagctggagaggttgcaggtatctatgatagattcaaac
ccaagactgcaaaatggtgcgcctgcagattcatctacctctgatggatattcggatgac
attgaacatgaagcaaactcgtacttccatcagatgttttctgatctgttaaccatcaat
gcaatggtgcaaatgcttgcccggttcaaggaatcttctgtgaagagggagaaatcaatt
tttgattgcatgattggaaacttgtttgaggagtataaattttttccgaaatatcctgaa
aggcaactcaaaattgctgcagttctctttggttccatcataaagcatcaccttgtgact
catctgtctctggggattgctcttcgatatgttcttgattcgttacgcaagcctgcagat
tcaaagatgtttacgtttggaagtctggctttggagcagtttgtggaccgccttattgag
tggcctcagtattgcaatcacattctgcaaatttcccatttgcgcagcacacattcagaa
attgtcactttcattgaacaggctcttgccaggatttctgctggtcatgcagatgtggat
ggggtgaaccatgcttcacttattagtaaccataattctgcacatactatgttagggcat
gtggagcagctcaatggctctggtgtcatccagcctgggcagcaacatatatcactgcag
cttcaacagaggcgtgatattcccttggatgatcgtcacaaagcctctgttggttcatcc
actgatgtaaaaccgatcttatcatctgtagggcaatcttcagcagttactcctgctgat
acttctagtagtaataagctacatagcactggcagtgcatcgtcgatgttatcttctcct
ggttttgttcgtccttcgcgaggagctacttcaaccaggtttggatcagccttgaacatt
gaaactttggttgcagctgctgagaaaagagaaactcccatcgaggctccagggtcagag
gttcaggacaagatatcatttataattaataatatatctactgcaaatattgaagctaaa
gcaaaagaattcaccgaaattttgaaagagcagtactatccatggtttgcacagtatatg
gttatgaaaagagcgagcattgagccaaatttccatgacttgtacctgaaattcctagat
aaagtcaattcaaaggctttgaacaaagagattgtgcaggcaacctatgaaaattgcaag
gttcttttaggatctgagctcataaagtctagttcagaagaacgctctttgcttaaaaat
ctgggaagctggcttggaaagttaacaattgggcggaatcaggttttgagggctcgtgaa
atagacccaaaatctttgattatagaggcatatgagaaggggctgatgatagctgttatc
ccatttacttcaaaggtccttgaaccatgccaaagcagtcttgcatatcaaccccctaat
ccatggacgatgggcattctgggattgcttgctgagatttattcaatgccaaacttgaaa
atgaacctcaaatttgacatagaggtgttgttcaaaaatcttagtgtggatatgaaggat
gttacgccaacttctctcctgaaggatcggaaaagagaaattgaaggaaatcctgatttc
tccaataaagatgttggggcgtctcaagcacaaatgatgtctgatataaaatctagcctt
atacagccagtaaatcaagtggagttaccacttgaagttaccaatccatctaatactggg
gcacatcctcatttactctctcagtacgctagtccacttcatatttccactggagccttg
atggaggatgaaaaggtaacacctctaggcttgtctgatcaacttccatctgctcaagga
ctattacaagcaactcctacgcctgtacctttttcccttagccagctcccatcacagata
cctaatattgcaactcatcttattatcaatcagaagcttagtggttttgggttgcaaatg
cattttcagagggctgtacctattgcaatggagagagctatcaaagagatagtatctagt
attgtgcagcgtagtgtttccatagctacacaaacaacaaaggagcttgttttaaaggat
tatgccatggaatcagacgagacacgcatagtaaatgctgcacacctgatggttgccagt
ctggctgggagcttagctcatgttacatgcaaagaacctttaagggcatcaatatcaagt
caactaagaatttcacttcagaatttaaatattgcaaatgaaattttggagcaagctgtg
caacttgtcaccaatgataatcttgatcttggttgtgcagtcattgagcaggctgctact
gataaggcaataaccaccattgatacagaaattaatcaacaactttctatgagaaggaag
catcgagaaggtatgggttccacattttttgatacaaacttgtacacacaaagttctatg
ggtgttgtgccagagcctcttcgacccaagcctggtcagttgtccctctcgcagcagcgc
gtctatgaggacttcgttcggcttccctggcaaaatcagtcaagtcagagctcacattct
atgtcatctggtctttcggttcaatctggaaatgctggtctcgctggcactaatggttct
gtatcaggacaaattaaccctggttactctgtaagctccagctatgaaggaggggtgtcg
cgaccagtagaagatatgtcggaatctaatttggctcaacacttcagtgcttcctcaatt
cacattagagctgctgacagtgtttcccagcacagtttggagaaagaatcagttgcttca
tttccttcaactgcttccacacctgagttgcacactgttgatacttctgatgctatgaaa
gaatctggagcttcacagccactagtttcatcaagtgccgtagagcgtcttggaagtagt
ttcttggagcccactatttctacaagggaagccttggataaataccaaatggttgcacaa
aagttggaggctttggttaataatgatgccaaggaagcagaaatacagggggtcatatcc
gaggttcctgagatcatactcagatgtgttagtcgagatgaggcagctttagctgtagcg
cagaaggtattcaagggcctttatgacaatgtatccaacaacactcatgttggtgctcat
cttgcaatcctgactgccattcgtgatgtttgcaagcttgccgttaaggagcttaccagc
tgggtaatttactcagaagaagaaaggaaattcaacaaagatattactgtaggcctgatc
cgcagtgaactgctaaatcttactgagtacaatgttcatatggcaaagctcattgatggg
ggaagaaacaaggctgctacggagttttctatttctcttcttcaaatgctggttgttgag
gaatcgaaagttatttcagaacttcacaatcttgttgatgctttggcaaagcttgcttca
aagcctggatcccctgaatcgttgcaacagctgatcgagatgatcaagaacccttctgtt
aatcctgctagtctatctgttagtgttcctgcaaaggaggataaggcaagacaatcaagg
gacaataagggtcctgggatgctggcaccaaaccgggaagaagtaaacattgtagagtct
gttgaaccagatcctgctggattccgtgagcaggtttccatgttgtttacagaatggtat
cggatatgtgaactccctcctccgaatgatacagcttctactcacttcatcttacaatta
catcaaaatggtctccttaagggggatgatgtaacagatcgcttcttccggctattgatg
gaactagttgttacacattgcttaaacagtgaggtgattaattctggggcattgcaatct
tctcaacagctgccagcaatgtcatttattgcaattgatatttatgccaagcttgtcttc
tcaatattgaagggatcaaacaagtcctttcttctttctaagattcttgcggtgactatt
cggttgattctaaaagatgcagaagagaagaaggcctcttttaatccaagaccgtatttc
agattgttcattaatttgcttctagatcttggttcacttgaacctgttactgatggtgca
aatctccagattttgattgcttttgccaatacttttcatgctttgcagcccctcaaggtt
cctgctttcagttttgcttggcttgagttgataagtcacaggagctttatgccaaaaatg
ctgactggtaatggtcaaaaaggttggccttatatccaaaggttgcttgttgatctcttc
caatttatggagccttttctgagacatgctgaactcggagatccggttcgttttctctat
aaaggcactcttagggtgctattggtgctacttcatgacttccctgagttcctatgtgac
tttcactttaccttctgtgatgttattccgccaagttgcatacagatgcggaatattgtt
ctgagtgcttttccacggagtatgaggttgccagatccatccacccccaatttgaagatt
gatttgcttcaagaaattactcaatccccaaggattctttcggaggtcgatgctgctatt
aaagcaaagcagattaaggctgatgtggatgaataccttaaggacaaagtctctgagctg
aaggacaagatgctcctttcacctaatgaagctgcttctgccgggacacgttacaatgtg
ccattgatcaactcacttgtgttgcatgttggaatgcaggcaatccaacaacttcaggga
cgatctccccatgctcaatctgcgtcacctggtttccccttggctgtattttctgttggt
gctgcattggatattttccagacactaattgtggaattggacactgaagggcgctatctt
ttcttaaatgccgttgccaaccaactacgctaccctaacacacacacccactacttctcc
ttcatccttctgtacttgtttgcggaatcaaaccaggaaatcatccaagaacaaattact
agagtattgttagaacggctgatcgttaatcgtcctcatccttggggactgctcatcact
ttcattgagctgatcaagaacccgaggtataacttctggaaccggtccttcataagatgc
gcaccagagattgagaaactttttgagtccgtctctaggtcctgcggcggtccaaaacca
gtggatgagagtatggtctccggttgggtttaa
DBGET
integrated database retrieval system
