Arcobacter defluvii: ADFLV_0698
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Entry
ADFLV_0698 CDS
T06891
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adz
Arcobacter defluvii
Pathway
adz03420
Nucleotide excision repair
adz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADFLV_0698 (rep)
03430 Mismatch repair
ADFLV_0698 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adz03400
]
ADFLV_0698 (rep)
Enzymes [BR:
adz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADFLV_0698 (rep)
DNA repair and recombination proteins [BR:
adz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADFLV_0698 (rep)
MMR (mismatch excision repair)
Other MMR factors
ADFLV_0698 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKF76747
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All DBs
Position
682957..685017
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AA seq
686 aa
AA seq
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MPLSNLNQEQLEAATCPYGFNLIIASAGTGKTSTIVGRIANLINNGVKPNQILLLTFTNK
AAAEMVARVAKFFGKDIAKQIMAGTFHSVSYKLLKELNVNITLKQPNELKTLFKSIYEKR
VFMERNDEANPYDGGYLYDMYSLYLNSNDGEDFASWIKSKNASHEIYTLIYEDVVAEFHE
LKTKYGYANFDDLLTLMLETLKEKEFDFKEILVDEYQDTNPLQGRLLDGFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFAKRYENAKVFTLRKNYRSTKPILDLATKVIEFNERVYEKKL
EVVRTQEEHKPKLLAFNELFSQYEYISQLISKSETPHNEIAIIYRNNSSADGIEANLREF
SIPAKRKGGMSFFDSVEVKFILDVLVMQLSHNDMMAFIHVVEHGKGIGKAIAKDVFDALI
RLGDGDILRGLFQPRSDINNPYETGKIKNQQLGLFDDFIELGSVSKFKDCNFEEAFLGNP
ILKHPKLNVDGGKYLYDIYLLMKHLRRTKNPETLVGNIISSMAYSKLKDFLSTKRATQKD
GTINPMQKTKALAKINRKGMLLKNLSRNFNDLSKFINSMILGGSEMSEGDGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDILYLSYAKYDKMKK
LTFVASPFLKEAGMQIKDDEESQIQE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcaaatctaaatcaagaacaactagaagcggcaacttgtccttatggtttt
aatctaattattgcaagtgctgggacaggaaaaacttctactatagttgggagaattgca
aatttaataaacaatggtgttaaaccaaatcaaatattacttttaacttttacaaataaa
gcagcagctgaaatggtagcaagggttgctaaattttttggaaaagatatcgcaaaacaa
ataatggcaggaacttttcactctgtttcttataaacttttaaaagaactaaatgtaaat
attactttaaaacagccaaatgaattaaaaactttatttaaatctatttatgaaaaaaga
gtttttatggaaagaaatgatgaagcaaatccatatgatggtggatatttgtatgatatg
tactctttatatctaaattcaaatgatggtgaagattttgcttcatggataaaatcaaaa
aatgctagtcatgaaatttatactttaatttatgaagatgtagttgctgaatttcatgaa
ttgaaaacaaaatatggttatgcaaattttgatgatttactaacacttatgcttgaaact
ttaaaagaaaaagagtttgattttaaagagattttagtagacgagtatcaagatacaaat
ccacttcaaggaagattacttgatggatttagaccaaaatcactattttgtgtaggtgat
tatgatcaaagtatttatgcttttaatggttctgatattggaattatttcaacttttgca
aaaagatatgaaaatgcaaaagtatttactcttagaaaaaattatcgttcaacaaaacca
atcttagatttagcaacaaaagttattgaatttaatgaaagggtttatgaaaaaaaactt
gaagttgtaagaactcaagaagaacataaaccaaaactattagcttttaatgagcttttc
tctcaatatgaatatatctcacaattgatttcaaaaagtgaaactccacataatgaaatt
gcaataatatatagaaataattcaagtgcagatggtattgaagcaaatttaagagagttt
tccattcctgctaaacgaaaaggtggaatgagtttttttgactctgttgaagttaaattt
atacttgatgtattagttatgcaactttctcacaatgatatgatggcttttattcatgtt
gttgagcatggaaaaggtattggaaaagctatagcaaaagatgtatttgatgctttaatt
aggcttggtgatggagatattttaagaggattatttcaaccaagaagtgatataaacaat
ccttatgaaacaggaaaaatcaaaaatcagcaattaggtctttttgatgattttatagag
ttaggttcagtttcaaaatttaaagattgtaattttgaagaggcatttttaggaaatcca
atactaaaacatccaaaattaaatgttgatggaggaaaatatctttatgatatttattta
ttaatgaaacatttaagaagaacaaaaaatccagagacattggttggaaatatcatatct
tctatggcatattctaagttaaaagattttttatctacaaaaagagcaacacaaaaagat
ggaacaataaatcctatgcaaaaaacaaaagcattagcgaaaataaatagaaaaggtatg
cttttaaaaaatttatcaagaaattttaacgacctttcaaaatttataaactctatgatt
ttaggtggaagtgagatgagtgaaggtgatggagtaaatctactttcaattcatgcaagt
aaaggtttagagtttaaagaagtttatgtaatagatctaatggatggaagatttccaaat
cgaaaacttatgagtaaaggtggaagtattgaagaagaaagacgtcttttttacgttgca
gttacaagggcaaaagatatcttatatctttcatacgcaaaatatgacaagatgaaaaaa
cttacatttgtagccagtccatttctaaaagaagcaggtatgcaaataaaagacgacgaa
gaatctcaaattcaagagtaa
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